RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 MUC3AQ02505 3323 aa7.15□□□□□ -1.26
ARHGEF28-212ENST00000513042 COL7A1Q02388 2944 aa7.11□□□□□ -1.27
ARHGEF28-212ENST00000513042 AKAP9Q99996 3911 aa7.08□□□□□ -1.28
ARHGEF28-212ENST00000513042 SRRM2Q9UQ35 2752 aaKnown RBP7.06□□□□□ -1.28
ARHGEF28-212ENST00000513042 CSMD3Q7Z407 3707 aa7.05□□□□□ -1.28
ARHGEF28-212ENST00000513042 DNAH9Q9NYC9 4486 aa6.97□□□□□ -1.29
ARHGEF28-212ENST00000513042 KRTAP4-1Q9BYQ7 146 aa6.95□□□□□ -1.3
ARHGEF28-212ENST00000513042 DNAH1Q9P2D7 4330 aa6.93□□□□□ -1.3
ARHGEF28-212ENST00000513042 MT1HP80294 61 aa6.89□□□□□ -1.31
ARHGEF28-212ENST00000513042 DNAH2Q9P225 4427 aa6.84□□□□□ -1.31
ARHGEF28-212ENST00000513042 DNAH10Q8IVF4 4471 aa6.82□□□□□ -1.32
ARHGEF28-212ENST00000513042 DNAH5Q8TE73 4624 aa6.8□□□□□ -1.32
ARHGEF28-212ENST00000513042 MT2AP02795 61 aa6.75□□□□□ -1.33
ARHGEF28-212ENST00000513042 KRTAP19-5Q3LI72 72 aa6.73□□□□□ -1.33
ARHGEF28-212ENST00000513042 SPRR2FQ96RM1 72 aa6.68□□□□□ -1.34
ARHGEF28-212ENST00000513042 DNAH3Q8TD57 4116 aa6.68□□□□□ -1.34
ARHGEF28-212ENST00000513042 DNAH11Q96DT5 4516 aa6.66□□□□□ -1.34
ARHGEF28-212ENST00000513042 PLECQ15149 4684 aaKnown RBP6.66□□□□□ -1.34
ARHGEF28-212ENST00000513042 SPRR2GQ9BYE4 73 aa6.64□□□□□ -1.35
ARHGEF28-212ENST00000513042 MT1FP04733 61 aa6.64□□□□□ -1.35
ARHGEF28-212ENST00000513042 DNAH17Q9UFH2 4485 aa6.63□□□□□ -1.35
ARHGEF28-212ENST00000513042 KRTAP10-7P60409 375 aaPredicted RBP6.63□□□□□ -1.35
ARHGEF28-212ENST00000513042 DNAH8Q96JB1 4490 aa6.62□□□□□ -1.35
ARHGEF28-212ENST00000513042 LCE3CQ5T5A8 94 aa6.59□□□□□ -1.35
ARHGEF28-212ENST00000513042 ZNF469Q96JG9 3925 aaPredicted RBP6.58□□□□□ -1.36
ARHGEF28-212ENST00000513042 VPS13DQ5THJ4 4388 aa6.54□□□□□ -1.36
ARHGEF28-212ENST00000513042 FAT2Q9NYQ8 4349 aa6.52□□□□□ -1.37
ARHGEF28-212ENST00000513042 ANK2Q01484 3957 aa6.49□□□□□ -1.37
ARHGEF28-212ENST00000513042 LRP1BQ9NZR2 4599 aa6.43□□□□□ -1.38
ARHGEF28-212ENST00000513042 DYNC2H1Q8NCM8 4307 aaKnown RBP6.42□□□□□ -1.38
ARHGEF28-212ENST00000513042 SACSQ9NZJ4 4579 aa6.41□□□□□ -1.38
ARHGEF28-212ENST00000513042 DYNC1H1Q14204 4646 aaKnown RBP6.38□□□□□ -1.39
ARHGEF28-212ENST00000513042 STARD9Q9P2P6 4700 aa6.38□□□□□ -1.39
ARHGEF28-212ENST00000513042 FAT1Q14517 4588 aa6.35□□□□□ -1.39
ARHGEF28-212ENST00000513042 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
ARHGEF28-212ENST00000513042 SPRR2EP22531 72 aa6.3□□□□□ -1.4
ARHGEF28-212ENST00000513042 SPRR2BP35325 72 aa6.3□□□□□ -1.4
ARHGEF28-212ENST00000513042 SPRR2AP35326 72 aa6.3□□□□□ -1.4
ARHGEF28-212ENST00000513042 FRAS1Q86XX4 4008 aa6.3□□□□□ -1.4
ARHGEF28-212ENST00000513042 DNAH7Q8WXX0 4024 aa6.29□□□□□ -1.4
ARHGEF28-212ENST00000513042 PRKDCP78527 4128 aaKnown RBP6.29□□□□□ -1.4
ARHGEF28-212ENST00000513042 CMYA5Q8N3K9 4069 aa6.28□□□□□ -1.4
ARHGEF28-212ENST00000513042 VPS13BQ7Z7G8 4022 aa6.26□□□□□ -1.41
ARHGEF28-212ENST00000513042 KMT2AQ03164 3969 aa6.25□□□□□ -1.41
ARHGEF28-212ENST00000513042 DNAH6Q9C0G6 4158 aa6.2□□□□□ -1.42
ARHGEF28-212ENST00000513042 MT1GP13640 62 aa6.19□□□□□ -1.42
ARHGEF28-212ENST00000513042 APOBP04114 4563 aaKnown RBP6.18□□□□□ -1.42
ARHGEF28-212ENST00000513042 RYR1P21817 5038 aa6.1□□□□□ -1.43
ARHGEF28-212ENST00000513042 MT1XP80297 61 aa6.09□□□□□ -1.43
ARHGEF28-212ENST00000513042 KRTAP19-1Q8IUB9 90 aa6.09□□□□□ -1.43
ARHGEF28-212ENST00000513042 SPRR2DP22532 72 aa6.08□□□□□ -1.44
ARHGEF28-212ENST00000513042 KRTAP19-8Q3LI54 63 aa6.07□□□□□ -1.44
ARHGEF28-212ENST00000513042 KRTAP12-4P60329 112 aa6.06□□□□□ -1.44
ARHGEF28-212ENST00000513042 DNHD1Q96M86 4753 aa6.03□□□□□ -1.44
ARHGEF28-212ENST00000513042 KRTAP17-1Q9BYP8 105 aa6.03□□□□□ -1.44
ARHGEF28-212ENST00000513042 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.45
ARHGEF28-212ENST00000513042 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
ARHGEF28-212ENST00000513042 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
ARHGEF28-212ENST00000513042 FAT3Q8TDW7 4589 aa6□□□□□ -1.45
ARHGEF28-212ENST00000513042 LCE2BO14633 110 aa5.99□□□□□ -1.45
ARHGEF28-212ENST00000513042 LYSTQ99698 3801 aa5.98□□□□□ -1.45
ARHGEF28-212ENST00000513042 MT1BP07438 61 aa5.95□□□□□ -1.46
ARHGEF28-212ENST00000513042 RYR3Q15413 4870 aa5.9□□□□□ -1.47
ARHGEF28-212ENST00000513042 HECTD4Q9Y4D8 3996 aa5.89□□□□□ -1.47
ARHGEF28-212ENST00000513042 KRTAP9-8Q9BYQ0 159 aa5.85□□□□□ -1.47
ARHGEF28-212ENST00000513042 LRP1Q07954 4544 aaKnown RBP5.85□□□□□ -1.47
ARHGEF28-212ENST00000513042 LCE3DQ9BYE3 92 aa5.82□□□□□ -1.48
ARHGEF28-212ENST00000513042 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
ARHGEF28-212ENST00000513042 KRTAP9-3Q9BYQ3 159 aa5.73□□□□□ -1.49
ARHGEF28-212ENST00000513042 MYCBP2O75592 4640 aa5.72□□□□□ -1.49
ARHGEF28-212ENST00000513042 LCE3EQ5T5B0 92 aa5.7□□□□□ -1.5
ARHGEF28-212ENST00000513042 SPRR5A0A1B0GTR4 108 aa5.69□□□□□ -1.5
ARHGEF28-212ENST00000513042 HERC1Q15751 4861 aa5.67□□□□□ -1.5
ARHGEF28-212ENST00000513042 LCE2CQ5TA81 110 aa5.65□□□□□ -1.5
ARHGEF28-212ENST00000513042 LPAP08519 4548 aa5.65□□□□□ -1.51
ARHGEF28-212ENST00000513042 HSPG2P98160 4391 aa5.64□□□□□ -1.51
ARHGEF28-212ENST00000513042 PKHD1L1Q86WI1 4243 aa5.63□□□□□ -1.51
ARHGEF28-212ENST00000513042 PKD1P98161 4303 aa5.63□□□□□ -1.51
ARHGEF28-212ENST00000513042 KRTAP19-3Q7Z4W3 81 aa5.59□□□□□ -1.51
ARHGEF28-212ENST00000513042 MT1LQ93083 61 aa5.55□□□□□ -1.52
ARHGEF28-212ENST00000513042 LCE2DQ5TA82 110 aaPredicted RBP5.54□□□□□ -1.52
ARHGEF28-212ENST00000513042 RYR2Q92736 4967 aa5.53□□□□□ -1.52
ARHGEF28-212ENST00000513042 MT4P47944 62 aa5.48□□□□□ -1.53
ARHGEF28-212ENST00000513042 MT1EP04732 61 aa5.48□□□□□ -1.53
ARHGEF28-212ENST00000513042 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
ARHGEF28-212ENST00000513042 PRM1P04553 51 aa5.43□□□□□ -1.54
ARHGEF28-212ENST00000513042 TNXBP22105 4242 aa5.42□□□□□ -1.54
ARHGEF28-212ENST00000513042 HYDINQ4G0P3 5121 aa5.38□□□□□ -1.55
ARHGEF28-212ENST00000513042 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
ARHGEF28-212ENST00000513042 PKHD1P08F94 4074 aa5.37□□□□□ -1.55
ARHGEF28-212ENST00000513042 MT1MQ8N339 61 aa5.35□□□□□ -1.55
ARHGEF28-212ENST00000513042 LCE1BQ5T7P3 118 aa5.31□□□□□ -1.56
ARHGEF28-212ENST00000513042 LRP2P98164 4655 aa5.3□□□□□ -1.56
ARHGEF28-212ENST00000513042 MT3P25713 68 aa5.3□□□□□ -1.56
ARHGEF28-212ENST00000513042 MUC17Q685J3 4493 aa5.29□□□□□ -1.56
ARHGEF28-212ENST00000513042 KIAA1109Q2LD37 5005 aa5.29□□□□□ -1.56
ARHGEF28-212ENST00000513042 KRTAP19-2Q3LHN2 52 aa5.26□□□□□ -1.57
ARHGEF28-212ENST00000513042 HERC2O95714 4834 aa5.25□□□□□ -1.57
ARHGEF28-212ENST00000513042 LCE1DQ5T752 114 aa5.25□□□□□ -1.57
ARHGEF28-212ENST00000513042 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms