RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 DNHD1Q96M86 4753 aa6.89□□□□□ -1.31
PRDM16-206ENST00000511072 KRTAP12-1P59990 96 aa6.88□□□□□ -1.31
PRDM16-206ENST00000511072 DNAH17Q9UFH2 4485 aa6.87□□□□□ -1.31
PRDM16-206ENST00000511072 PLECQ15149 4684 aaKnown RBP6.86□□□□□ -1.31
PRDM16-206ENST00000511072 KRTAP3-2Q9BYR7 98 aa6.82□□□□□ -1.32
PRDM16-206ENST00000511072 MT1HL1P0DM35 61 aa6.8□□□□□ -1.32
PRDM16-206ENST00000511072 STARD9Q9P2P6 4700 aa6.77□□□□□ -1.33
PRDM16-206ENST00000511072 PRKDCP78527 4128 aaKnown RBP6.77□□□□□ -1.33
PRDM16-206ENST00000511072 KRTAP3-3Q9BYR6 98 aa6.76□□□□□ -1.33
PRDM16-206ENST00000511072 KMT2AQ03164 3969 aa6.74□□□□□ -1.33
PRDM16-206ENST00000511072 KRTAP4-5Q9BYR2 181 aa6.73□□□□□ -1.33
PRDM16-206ENST00000511072 KRTAP10-4P60372 401 aaPredicted RBP6.7□□□□□ -1.34
PRDM16-206ENST00000511072 DNAH5Q8TE73 4624 aa6.68□□□□□ -1.34
PRDM16-206ENST00000511072 DNAH11Q96DT5 4516 aa6.67□□□□□ -1.34
PRDM16-206ENST00000511072 PRO2289Q9P1D8 64 aa6.67□□□□□ -1.34
PRDM16-206ENST00000511072 DYNC2H1Q8NCM8 4307 aaKnown RBP6.66□□□□□ -1.34
PRDM16-206ENST00000511072 HECTD4Q9Y4D8 3996 aa6.62□□□□□ -1.35
PRDM16-206ENST00000511072 VPS13DQ5THJ4 4388 aa6.62□□□□□ -1.35
PRDM16-206ENST00000511072 DNAH2Q9P225 4427 aa6.62□□□□□ -1.35
PRDM16-206ENST00000511072 FAT1Q14517 4588 aa6.59□□□□□ -1.35
PRDM16-206ENST00000511072 LRP1BQ9NZR2 4599 aa6.58□□□□□ -1.36
PRDM16-206ENST00000511072 DNAH6Q9C0G6 4158 aa6.56□□□□□ -1.36
PRDM16-206ENST00000511072 RYR1P21817 5038 aa6.44□□□□□ -1.38
PRDM16-206ENST00000511072 HYDINQ4G0P3 5121 aa6.42□□□□□ -1.38
PRDM16-206ENST00000511072 MYCBP2O75592 4640 aa6.42□□□□□ -1.38
PRDM16-206ENST00000511072 VPS13BQ7Z7G8 4022 aa6.41□□□□□ -1.38
PRDM16-206ENST00000511072 DYNC1H1Q14204 4646 aaKnown RBP6.35□□□□□ -1.39
PRDM16-206ENST00000511072 KIAA1109Q2LD37 5005 aa6.35□□□□□ -1.39
PRDM16-206ENST00000511072 LORP23490 312 aaPredicted RBP6.34□□□□□ -1.39
PRDM16-206ENST00000511072 PKHD1P08F94 4074 aa6.31□□□□□ -1.4
PRDM16-206ENST00000511072 PKD1P98161 4303 aa6.29□□□□□ -1.4
PRDM16-206ENST00000511072 FAT2Q9NYQ8 4349 aa6.29□□□□□ -1.4
PRDM16-206ENST00000511072 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
PRDM16-206ENST00000511072 FAT3Q8TDW7 4589 aa6.22□□□□□ -1.41
PRDM16-206ENST00000511072 SACSQ9NZJ4 4579 aa6.19□□□□□ -1.42
PRDM16-206ENST00000511072 KRTAP4-1Q9BYQ7 146 aa6.15□□□□□ -1.43
PRDM16-206ENST00000511072 RYR3Q15413 4870 aa6.12□□□□□ -1.43
PRDM16-206ENST00000511072 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
PRDM16-206ENST00000511072 LRP1Q07954 4544 aaKnown RBP6.08□□□□□ -1.44
PRDM16-206ENST00000511072 KMT2CQ8NEZ4 4911 aaKnown RBP6.04□□□□□ -1.44
PRDM16-206ENST00000511072 CRCT1Q9UGL9 99 aa6.01□□□□□ -1.45
PRDM16-206ENST00000511072 LCE3AQ5TA76 89 aa6□□□□□ -1.45
PRDM16-206ENST00000511072 KRTAP12-3P60328 96 aa6□□□□□ -1.45
PRDM16-206ENST00000511072 INE1O15225 51 aa5.98□□□□□ -1.45
PRDM16-206ENST00000511072 HSPG2P98160 4391 aa5.98□□□□□ -1.45
PRDM16-206ENST00000511072 RYR2Q92736 4967 aa5.93□□□□□ -1.46
PRDM16-206ENST00000511072 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
PRDM16-206ENST00000511072 LRP2P98164 4655 aa5.9□□□□□ -1.47
PRDM16-206ENST00000511072 PKHD1L1Q86WI1 4243 aa5.88□□□□□ -1.47
PRDM16-206ENST00000511072 HERC2O95714 4834 aa5.82□□□□□ -1.48
PRDM16-206ENST00000511072 MT1HP80294 61 aa5.82□□□□□ -1.48
PRDM16-206ENST00000511072 MT2AP02795 61 aa5.78□□□□□ -1.48
PRDM16-206ENST00000511072 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
PRDM16-206ENST00000511072 TNXBP22105 4242 aa5.74□□□□□ -1.49
PRDM16-206ENST00000511072 LPAP08519 4548 aa5.74□□□□□ -1.49
PRDM16-206ENST00000511072 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
PRDM16-206ENST00000511072 PCLOQ9Y6V0 5065 aa5.72□□□□□ -1.49
PRDM16-206ENST00000511072 MT1FP04733 61 aa5.72□□□□□ -1.49
PRDM16-206ENST00000511072 SPRR2GQ9BYE4 73 aa5.67□□□□□ -1.5
PRDM16-206ENST00000511072 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
PRDM16-206ENST00000511072 EPPK1P58107 5090 aaKnown RBP5.6□□□□□ -1.51
PRDM16-206ENST00000511072 ABCA13Q86UQ4 5058 aa5.54□□□□□ -1.52
PRDM16-206ENST00000511072 BIRC6Q9NR09 4857 aa5.52□□□□□ -1.53
PRDM16-206ENST00000511072 KRTAP19-1Q8IUB9 90 aa5.5□□□□□ -1.53
PRDM16-206ENST00000511072 SYNE1Q8NF91 8797 aaKnown RBP5.5□□□□□ -1.53
PRDM16-206ENST00000511072 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
PRDM16-206ENST00000511072 FSIP2Q5CZC0 6907 aa5.47□□□□□ -1.53
PRDM16-206ENST00000511072 KRTAP19-5Q3LI72 72 aa5.43□□□□□ -1.54
PRDM16-206ENST00000511072 KRTAP10-7P60409 375 aaPredicted RBP5.36□□□□□ -1.55
PRDM16-206ENST00000511072 UBR4Q5T4S7 5183 aa5.33□□□□□ -1.56
PRDM16-206ENST00000511072 HERC1Q15751 4861 aa5.32□□□□□ -1.56
PRDM16-206ENST00000511072 SPRR2FQ96RM1 72 aa5.31□□□□□ -1.56
PRDM16-206ENST00000511072 MUC2Q02817 5179 aa5.31□□□□□ -1.56
PRDM16-206ENST00000511072 KRTAP19-8Q3LI54 63 aa5.28□□□□□ -1.56
PRDM16-206ENST00000511072 LCE2CQ5TA81 110 aa5.27□□□□□ -1.57
PRDM16-206ENST00000511072 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
PRDM16-206ENST00000511072 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
PRDM16-206ENST00000511072 MT1XP80297 61 aa5.25□□□□□ -1.57
PRDM16-206ENST00000511072 MT1BP07438 61 aa5.24□□□□□ -1.57
PRDM16-206ENST00000511072 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
PRDM16-206ENST00000511072 RNF213Q63HN8 5207 aa5.21□□□□□ -1.58
PRDM16-206ENST00000511072 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
PRDM16-206ENST00000511072 KRTAP4-8Q9BYQ9 185 aa5.2□□□□□ -1.58
PRDM16-206ENST00000511072 MUC17Q685J3 4493 aa5.19□□□□□ -1.58
PRDM16-206ENST00000511072 KRTAP19-2Q3LHN2 52 aa5.1□□□□□ -1.59
PRDM16-206ENST00000511072 KRTAP9-3Q9BYQ3 159 aa5.1□□□□□ -1.59
PRDM16-206ENST00000511072 FAT4Q6V0I7 4981 aa5.09□□□□□ -1.6
PRDM16-206ENST00000511072 FLGP20930 4061 aaPredicted RBP5.03□□□□□ -1.6
PRDM16-206ENST00000511072 LCE2BO14633 110 aa4.97□□□□□ -1.61
PRDM16-206ENST00000511072 MT1GP13640 62 aa4.96□□□□□ -1.62
PRDM16-206ENST00000511072 HMCN2Q8NDA2 5059 aa4.93□□□□□ -1.62
PRDM16-206ENST00000511072 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
PRDM16-206ENST00000511072 LCE3BQ5TA77 95 aa4.9□□□□□ -1.62
PRDM16-206ENST00000511072 SPRR2EP22531 72 aa4.84□□□□□ -1.63
PRDM16-206ENST00000511072 SPRR2BP35325 72 aa4.84□□□□□ -1.63
PRDM16-206ENST00000511072 SPRR2AP35326 72 aa4.84□□□□□ -1.63
PRDM16-206ENST00000511072 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
PRDM16-206ENST00000511072 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
PRDM16-206ENST00000511072 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
PRDM16-206ENST00000511072 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms