RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 KRTAP1-4P0C5Y4 121 aa2.16□□□□□ -2.06
NIPBL-206ENST00000509429 PRLHP81277 87 aa2.16□□□□□ -2.06
NIPBL-206ENST00000509429 NSD1Q96L73 2696 aaPredicted RBP2.16□□□□□ -2.06
NIPBL-206ENST00000509429 A0A096LNI7 61 aa2.15□□□□□ -2.07
NIPBL-206ENST00000509429 SMR3AQ99954 134 aa2.15□□□□□ -2.07
NIPBL-206ENST00000509429 NBEAL2Q6ZNJ1 2754 aa2.15□□□□□ -2.07
NIPBL-206ENST00000509429 DNAH3Q8TD57 4116 aa2.15□□□□□ -2.07
NIPBL-206ENST00000509429 CUBNO60494 3623 aa2.14□□□□□ -2.07
NIPBL-206ENST00000509429 TENM4Q6N022 2769 aa2.14□□□□□ -2.07
NIPBL-206ENST00000509429 VWFP04275 2813 aa2.13□□□□□ -2.07
NIPBL-206ENST00000509429 KRTAP13-1Q8IUC0 172 aa2.12□□□□□ -2.07
NIPBL-206ENST00000509429 ACANP16112 2415 aa2.11□□□□□ -2.07
NIPBL-206ENST00000509429 TEP1Q99973 2627 aaKnown RBP2.11□□□□□ -2.07
NIPBL-206ENST00000509429 ANK2Q01484 3957 aa2.1□□□□□ -2.07
NIPBL-206ENST00000509429 FASNP49327 2511 aaKnown RBP2.1□□□□□ -2.07
NIPBL-206ENST00000509429 K7EIL1 84 aa2.1□□□□□ -2.07
NIPBL-206ENST00000509429 KRTAP4-1Q9BYQ7 146 aa2.1□□□□□ -2.07
NIPBL-206ENST00000509429 CRCT1Q9UGL9 99 aa2.1□□□□□ -2.07
NIPBL-206ENST00000509429 TENM1Q9UKZ4 2725 aa2.1□□□□□ -2.07
NIPBL-206ENST00000509429 DYNC2H1Q8NCM8 4307 aaKnown RBP2.1□□□□□ -2.07
NIPBL-206ENST00000509429 SPRR5A0A1B0GTR4 108 aa2.09□□□□□ -2.07
NIPBL-206ENST00000509429 ATRQ13535 2644 aa2.09□□□□□ -2.08
NIPBL-206ENST00000509429 OTOGQ6ZRI0 2925 aa2.09□□□□□ -2.08
NIPBL-206ENST00000509429 CMYA5Q8N3K9 4069 aa2.09□□□□□ -2.08
NIPBL-206ENST00000509429 ITPR2Q14571 2701 aa2.09□□□□□ -2.08
NIPBL-206ENST00000509429 HUWE1Q7Z6Z7 4374 aaKnown RBP2.08□□□□□ -2.08
NIPBL-206ENST00000509429 HELZ2Q9BYK8 2649 aaKnown RBP2.07□□□□□ -2.08
NIPBL-206ENST00000509429 TENM3Q9P273 2699 aa2.07□□□□□ -2.08
NIPBL-206ENST00000509429 TRRAPQ9Y4A5 3859 aa2.07□□□□□ -2.08
NIPBL-206ENST00000509429 KRTAP13-4Q3LI77 160 aa2.07□□□□□ -2.08
NIPBL-206ENST00000509429 APLNQ9ULZ1 77 aa2.07□□□□□ -2.08
NIPBL-206ENST00000509429 MAST4O15021 2626 aa2.05□□□□□ -2.08
NIPBL-206ENST00000509429 BAHCC1Q9P281 2608 aa2.05□□□□□ -2.08
NIPBL-206ENST00000509429 DNAH10Q8IVF4 4471 aa2.05□□□□□ -2.08
NIPBL-206ENST00000509429 DNAH9Q9NYC9 4486 aa2.03□□□□□ -2.08
NIPBL-206ENST00000509429 HECTD1Q9ULT8 2610 aa2.03□□□□□ -2.09
NIPBL-206ENST00000509429 PKD1L1Q8TDX9 2849 aa2.02□□□□□ -2.09
NIPBL-206ENST00000509429 DNAH17Q9UFH2 4485 aa2.02□□□□□ -2.09
NIPBL-206ENST00000509429 SPINK6Q6UWN8 80 aa2.02□□□□□ -2.09
NIPBL-206ENST00000509429 VPS13DQ5THJ4 4388 aa2.01□□□□□ -2.09
NIPBL-206ENST00000509429 LYSTQ99698 3801 aa2.01□□□□□ -2.09
NIPBL-206ENST00000509429 NBEAL1Q6ZS30 2694 aa2.01□□□□□ -2.09
NIPBL-206ENST00000509429 FLNBO75369 2602 aaKnown RBP2.01□□□□□ -2.09
NIPBL-206ENST00000509429 S4R3F8 94 aa2.01□□□□□ -2.09
NIPBL-206ENST00000509429 TENM2Q9NT68 2774 aa2.01□□□□□ -2.09
NIPBL-206ENST00000509429 DNAH6Q9C0G6 4158 aa2□□□□□ -2.09
NIPBL-206ENST00000509429 DNAH8Q96JB1 4490 aa2□□□□□ -2.09
NIPBL-206ENST00000509429 STAB2Q8WWQ8 2551 aa2□□□□□ -2.09
NIPBL-206ENST00000509429 PRKDCP78527 4128 aaKnown RBP1.99□□□□□ -2.09
NIPBL-206ENST00000509429 PLECQ15149 4684 aaKnown RBP1.99□□□□□ -2.09
NIPBL-206ENST00000509429 F8P00451 2351 aa1.98□□□□□ -2.09
NIPBL-206ENST00000509429 STAB1Q9NY15 2570 aa1.98□□□□□ -2.09
NIPBL-206ENST00000509429 RPS29P62273 56 aaKnown RBP1.98□□□□□ -2.09
NIPBL-206ENST00000509429 DNAH7Q8WXX0 4024 aa1.98□□□□□ -2.09
NIPBL-206ENST00000509429 HECTD4Q9Y4D8 3996 aa1.98□□□□□ -2.09
NIPBL-206ENST00000509429 NOTCH1P46531 2555 aa1.98□□□□□ -2.09
NIPBL-206ENST00000509429 Q5VSD8 79 aa1.97□□□□□ -2.09
NIPBL-206ENST00000509429 SPINK1P00995 79 aa1.96□□□□□ -2.1
NIPBL-206ENST00000509429 DNAH2Q9P225 4427 aa1.96□□□□□ -2.1
NIPBL-206ENST00000509429 STARD9Q9P2P6 4700 aa1.95□□□□□ -2.1
NIPBL-206ENST00000509429 SRRM2Q9UQ35 2752 aaKnown RBP1.94□□□□□ -2.1
NIPBL-206ENST00000509429 FRAS1Q86XX4 4008 aa1.94□□□□□ -2.1
NIPBL-206ENST00000509429 CSMD3Q7Z407 3707 aa1.93□□□□□ -2.1
NIPBL-206ENST00000509429 FBN1P35555 2871 aaKnown RBP1.93□□□□□ -2.1
NIPBL-206ENST00000509429 COL6A5A8TX70 2615 aa1.93□□□□□ -2.1
NIPBL-206ENST00000509429 DNAH11Q96DT5 4516 aa1.93□□□□□ -2.1
NIPBL-206ENST00000509429 DNAH5Q8TE73 4624 aa1.93□□□□□ -2.1
NIPBL-206ENST00000509429 COL7A1Q02388 2944 aa1.93□□□□□ -2.1
NIPBL-206ENST00000509429 MGAM2Q2M2H8 2515 aa1.92□□□□□ -2.1
NIPBL-206ENST00000509429 FBN3Q75N90 2809 aa1.9□□□□□ -2.11
NIPBL-206ENST00000509429 MEGF8Q7Z7M0 2845 aa1.9□□□□□ -2.11
NIPBL-206ENST00000509429 KRTAP12-1P59990 96 aa1.89□□□□□ -2.11
NIPBL-206ENST00000509429 SACSQ9NZJ4 4579 aa1.89□□□□□ -2.11
NIPBL-206ENST00000509429 A0A0D9SG42 100 aa1.88□□□□□ -2.11
NIPBL-206ENST00000509429 PKHD1L1Q86WI1 4243 aa1.86□□□□□ -2.11
NIPBL-206ENST00000509429 FAT2Q9NYQ8 4349 aa1.86□□□□□ -2.11
NIPBL-206ENST00000509429 PKD1P98161 4303 aa1.86□□□□□ -2.11
NIPBL-206ENST00000509429 TGP01266 2768 aa1.86□□□□□ -2.11
NIPBL-206ENST00000509429 KMT2AQ03164 3969 aa1.85□□□□□ -2.11
NIPBL-206ENST00000509429 LRP1BQ9NZR2 4599 aa1.84□□□□□ -2.11
NIPBL-206ENST00000509429 APOBP04114 4563 aaKnown RBP1.84□□□□□ -2.11
NIPBL-206ENST00000509429 VPS13BQ7Z7G8 4022 aa1.83□□□□□ -2.12
NIPBL-206ENST00000509429 KRTAP10-10P60014 251 aa1.83□□□□□ -2.12
NIPBL-206ENST00000509429 C9orf92A6NGG3 77 aa1.82□□□□□ -2.12
NIPBL-206ENST00000509429 PKHD1P08F94 4074 aa1.81□□□□□ -2.12
NIPBL-206ENST00000509429 FCGBPQ9Y6R7 5405 aaPredicted RBP1.81□□□□□ -2.12
NIPBL-206ENST00000509429 DYNC1H1Q14204 4646 aaKnown RBP1.8□□□□□ -2.12
NIPBL-206ENST00000509429 M0QZ58 72 aa1.79□□□□□ -2.12
NIPBL-206ENST00000509429 TNXBP22105 4242 aa1.78□□□□□ -2.12
NIPBL-206ENST00000509429 KRTAP6-3Q3LI67 103 aa1.78□□□□□ -2.12
NIPBL-206ENST00000509429 KRTAP10-4P60372 401 aaPredicted RBP1.77□□□□□ -2.13
NIPBL-206ENST00000509429 HSPG2P98160 4391 aa1.76□□□□□ -2.13
NIPBL-206ENST00000509429 HYDINQ4G0P3 5121 aa1.76□□□□□ -2.13
NIPBL-206ENST00000509429 FAT3Q8TDW7 4589 aa1.76□□□□□ -2.13
NIPBL-206ENST00000509429 DNHD1Q96M86 4753 aa1.75□□□□□ -2.13
NIPBL-206ENST00000509429 KRTAP21-3Q3LHN1 58 aa1.75□□□□□ -2.13
NIPBL-206ENST00000509429 FAT1Q14517 4588 aa1.75□□□□□ -2.13
NIPBL-206ENST00000509429 SMR3BP02814 79 aaPredicted RBP1.74□□□□□ -2.13
NIPBL-206ENST00000509429 MYCBP2O75592 4640 aa1.74□□□□□ -2.13
NIPBL-206ENST00000509429 DMBT1Q9UGM3 2413 aaPredicted RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms