RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 KRTAP13-4Q3LI77 160 aa5.52□□□□□ -1.53
PDLIM5-210ENST00000508216 TRRAPQ9Y4A5 3859 aa5.49□□□□□ -1.53
PDLIM5-210ENST00000508216 EPPK1P58107 5090 aaKnown RBP5.48□□□□□ -1.53
PDLIM5-210ENST00000508216 SRRM2Q9UQ35 2752 aaKnown RBP5.47□□□□□ -1.53
PDLIM5-210ENST00000508216 APLNQ9ULZ1 77 aa5.46□□□□□ -1.54
PDLIM5-210ENST00000508216 MAPK1IP1LQ8NDC0 245 aa5.45□□□□□ -1.54
PDLIM5-210ENST00000508216 R4GN34 69 aa5.44□□□□□ -1.54
PDLIM5-210ENST00000508216 TENM1Q9UKZ4 2725 aa5.43□□□□□ -1.54
PDLIM5-210ENST00000508216 KRTAP12-2P59991 146 aa5.43□□□□□ -1.54
PDLIM5-210ENST00000508216 UBE2DNLQ8IWF7 75 aa5.43□□□□□ -1.54
PDLIM5-210ENST00000508216 A0A0D9SG42 100 aa5.42□□□□□ -1.54
PDLIM5-210ENST00000508216 KRTAP12-1P59990 96 aa5.42□□□□□ -1.54
PDLIM5-210ENST00000508216 VPS13DQ5THJ4 4388 aa5.41□□□□□ -1.54
PDLIM5-210ENST00000508216 CSMD3Q7Z407 3707 aa5.38□□□□□ -1.55
PDLIM5-210ENST00000508216 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
PDLIM5-210ENST00000508216 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
PDLIM5-210ENST00000508216 FRAS1Q86XX4 4008 aa5.35□□□□□ -1.55
PDLIM5-210ENST00000508216 HYDINQ4G0P3 5121 aa5.35□□□□□ -1.55
PDLIM5-210ENST00000508216 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
PDLIM5-210ENST00000508216 CMYA5Q8N3K9 4069 aa5.29□□□□□ -1.56
PDLIM5-210ENST00000508216 DNAH8Q96JB1 4490 aa5.28□□□□□ -1.56
PDLIM5-210ENST00000508216 KRTAP10-3P60369 221 aa5.28□□□□□ -1.56
PDLIM5-210ENST00000508216 RYR2Q92736 4967 aa5.27□□□□□ -1.57
PDLIM5-210ENST00000508216 KRTAP1-5Q9BYS1 174 aa5.26□□□□□ -1.57
PDLIM5-210ENST00000508216 M0QZ58 72 aa5.25□□□□□ -1.57
PDLIM5-210ENST00000508216 KRTAP10-8P60410 259 aa5.24□□□□□ -1.57
PDLIM5-210ENST00000508216 RYR1P21817 5038 aa5.23□□□□□ -1.57
PDLIM5-210ENST00000508216 HERC2O95714 4834 aa5.22□□□□□ -1.57
PDLIM5-210ENST00000508216 RPS29P62273 56 aaKnown RBP5.22□□□□□ -1.57
PDLIM5-210ENST00000508216 TENM3Q9P273 2699 aa5.21□□□□□ -1.58
PDLIM5-210ENST00000508216 KRTAP13-2Q52LG2 175 aa5.19□□□□□ -1.58
PDLIM5-210ENST00000508216 DYNC2H1Q8NCM8 4307 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-210ENST00000508216 KRTAP10-11P60412 298 aa5.18□□□□□ -1.58
PDLIM5-210ENST00000508216 SACSQ9NZJ4 4579 aa5.16□□□□□ -1.58
PDLIM5-210ENST00000508216 DNAH17Q9UFH2 4485 aa5.15□□□□□ -1.58
PDLIM5-210ENST00000508216 DNAH11Q96DT5 4516 aa5.12□□□□□ -1.59
PDLIM5-210ENST00000508216 COL7A1Q02388 2944 aa5.12□□□□□ -1.59
PDLIM5-210ENST00000508216 DMBT1Q9UGM3 2413 aaPredicted RBP5.1□□□□□ -1.59
PDLIM5-210ENST00000508216 DNAH10Q8IVF4 4471 aa5.1□□□□□ -1.59
PDLIM5-210ENST00000508216 LYSTQ99698 3801 aa5.09□□□□□ -1.59
PDLIM5-210ENST00000508216 LCE1AQ5T7P2 110 aa5.04□□□□□ -1.6
PDLIM5-210ENST00000508216 DNAH9Q9NYC9 4486 aa5.03□□□□□ -1.6
PDLIM5-210ENST00000508216 UBR4Q5T4S7 5183 aa5.01□□□□□ -1.61
PDLIM5-210ENST00000508216 DNAH3Q8TD57 4116 aa5□□□□□ -1.61
PDLIM5-210ENST00000508216 KRTAP1-4P0C5Y4 121 aa5□□□□□ -1.61
PDLIM5-210ENST00000508216 Q5VSD8 79 aa5□□□□□ -1.61
PDLIM5-210ENST00000508216 MYCBP2O75592 4640 aa4.99□□□□□ -1.61
PDLIM5-210ENST00000508216 DNAH6Q9C0G6 4158 aa4.97□□□□□ -1.61
PDLIM5-210ENST00000508216 KIAA1109Q2LD37 5005 aa4.96□□□□□ -1.62
PDLIM5-210ENST00000508216 STAB2Q8WWQ8 2551 aa4.96□□□□□ -1.62
PDLIM5-210ENST00000508216 ABCA13Q86UQ4 5058 aa4.95□□□□□ -1.62
PDLIM5-210ENST00000508216 DNAH7Q8WXX0 4024 aa4.95□□□□□ -1.62
PDLIM5-210ENST00000508216 HECTD4Q9Y4D8 3996 aa4.89□□□□□ -1.63
PDLIM5-210ENST00000508216 DNAH2Q9P225 4427 aa4.88□□□□□ -1.63
PDLIM5-210ENST00000508216 STARD9Q9P2P6 4700 aa4.87□□□□□ -1.63
PDLIM5-210ENST00000508216 HERC1Q15751 4861 aa4.87□□□□□ -1.63
PDLIM5-210ENST00000508216 A0A1B0GVY2 172 aa4.85□□□□□ -1.63
PDLIM5-210ENST00000508216 HUWE1Q7Z6Z7 4374 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-210ENST00000508216 C9orf92A6NGG3 77 aa4.8□□□□□ -1.64
PDLIM5-210ENST00000508216 KMT2AQ03164 3969 aa4.8□□□□□ -1.64
PDLIM5-210ENST00000508216 PLECQ15149 4684 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-210ENST00000508216 APOBP04114 4563 aaKnown RBP4.7□□□□□ -1.66
PDLIM5-210ENST00000508216 PKHD1P08F94 4074 aa4.65□□□□□ -1.67
PDLIM5-210ENST00000508216 TNP1P09430 55 aa4.65□□□□□ -1.67
PDLIM5-210ENST00000508216 KRTAP2-2Q9BYT5 123 aa4.64□□□□□ -1.67
PDLIM5-210ENST00000508216 DYNC1H1Q14204 4646 aaKnown RBP4.64□□□□□ -1.67
PDLIM5-210ENST00000508216 HSPG2P98160 4391 aa4.64□□□□□ -1.67
PDLIM5-210ENST00000508216 MT3P25713 68 aa4.61□□□□□ -1.67
PDLIM5-210ENST00000508216 PKHD1L1Q86WI1 4243 aa4.57□□□□□ -1.68
PDLIM5-210ENST00000508216 LRP1Q07954 4544 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-210ENST00000508216 FAT2Q9NYQ8 4349 aa4.55□□□□□ -1.68
PDLIM5-210ENST00000508216 PKD1P98161 4303 aa4.52□□□□□ -1.69
PDLIM5-210ENST00000508216 KRTAP10-10P60014 251 aa4.52□□□□□ -1.69
PDLIM5-210ENST00000508216 LRP1BQ9NZR2 4599 aa4.49□□□□□ -1.69
PDLIM5-210ENST00000508216 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
PDLIM5-210ENST00000508216 DNAH5Q8TE73 4624 aa4.48□□□□□ -1.69
PDLIM5-210ENST00000508216 RNF213Q63HN8 5207 aa4.43□□□□□ -1.7
PDLIM5-210ENST00000508216 KRTAP10-1P60331 282 aa4.42□□□□□ -1.7
PDLIM5-210ENST00000508216 TNXBP22105 4242 aa4.4□□□□□ -1.7
PDLIM5-210ENST00000508216 VPS13BQ7Z7G8 4022 aa4.39□□□□□ -1.71
PDLIM5-210ENST00000508216 FAT3Q8TDW7 4589 aa4.36□□□□□ -1.71
PDLIM5-210ENST00000508216 FLGP20930 4061 aaPredicted RBP4.32□□□□□ -1.72
PDLIM5-210ENST00000508216 FAT1Q14517 4588 aa4.3□□□□□ -1.72
PDLIM5-210ENST00000508216 MUC2Q02817 5179 aa4.3□□□□□ -1.72
PDLIM5-210ENST00000508216 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
PDLIM5-210ENST00000508216 FAT4Q6V0I7 4981 aa4.26□□□□□ -1.73
PDLIM5-210ENST00000508216 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
PDLIM5-210ENST00000508216 LRP2P98164 4655 aa4.23□□□□□ -1.73
PDLIM5-210ENST00000508216 KRTAP10-7P60409 375 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-210ENST00000508216 KRTAP10-4P60372 401 aaPredicted RBP4.19□□□□□ -1.74
PDLIM5-210ENST00000508216 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-210ENST00000508216 SMR3BP02814 79 aaPredicted RBP4.17□□□□□ -1.74
PDLIM5-210ENST00000508216 CRCT1Q9UGL9 99 aa4.17□□□□□ -1.74
PDLIM5-210ENST00000508216 LCE1EQ5T753 118 aa4.15□□□□□ -1.74
PDLIM5-210ENST00000508216 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
PDLIM5-210ENST00000508216 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
PDLIM5-210ENST00000508216 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
PDLIM5-210ENST00000508216 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
PDLIM5-210ENST00000508216 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
PDLIM5-210ENST00000508216 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms