RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 USP34Q70CQ2 3546 aa0.59□□□□□ -2.31
SPCS3-202ENST00000507001 VPS13BQ7Z7G8 4022 aa0.59□□□□□ -2.31
SPCS3-202ENST00000507001 PDZD2O15018 2839 aa0.59□□□□□ -2.31
SPCS3-202ENST00000507001 PIEZO1Q92508 2521 aa0.59□□□□□ -2.31
SPCS3-202ENST00000507001 KMT2AQ03164 3969 aa0.59□□□□□ -2.31
SPCS3-202ENST00000507001 A0A096LNI7 61 aa0.59□□□□□ -2.31
SPCS3-202ENST00000507001 M0R2T5 61 aa0.59□□□□□ -2.31
SPCS3-202ENST00000507001 KRTAP8-1Q8IUC2 63 aa0.59□□□□□ -2.31
SPCS3-202ENST00000507001 FLNCQ14315 2725 aa0.59□□□□□ -2.32
SPCS3-202ENST00000507001 SONP18583 2426 aaKnown RBP0.59□□□□□ -2.32
SPCS3-202ENST00000507001 SPG11Q96JI7 2443 aa0.59□□□□□ -2.32
SPCS3-202ENST00000507001 ATRQ13535 2644 aa0.59□□□□□ -2.32
SPCS3-202ENST00000507001 LAMA3Q16787 3333 aa0.59□□□□□ -2.32
SPCS3-202ENST00000507001 NSD1Q96L73 2696 aaPredicted RBP0.59□□□□□ -2.32
SPCS3-202ENST00000507001 LAMA1P25391 3075 aa0.58□□□□□ -2.32
SPCS3-202ENST00000507001 COL7A1Q02388 2944 aa0.58□□□□□ -2.32
SPCS3-202ENST00000507001 DCHS2Q6V1P9 2916 aa0.58□□□□□ -2.32
SPCS3-202ENST00000507001 CSMD1Q96PZ7 3565 aa0.58□□□□□ -2.32
SPCS3-202ENST00000507001 SPART-AS1P0CW21 52 aa0.58□□□□□ -2.32
SPCS3-202ENST00000507001 ASPMQ8IZT6 3477 aa0.58□□□□□ -2.32
SPCS3-202ENST00000507001 UTP20O75691 2785 aaKnown RBP0.57□□□□□ -2.32
SPCS3-202ENST00000507001 ACANP16112 2415 aa0.57□□□□□ -2.32
SPCS3-202ENST00000507001 ANK2Q01484 3957 aa0.57□□□□□ -2.32
SPCS3-202ENST00000507001 CENPEQ02224 2701 aa0.57□□□□□ -2.32
SPCS3-202ENST00000507001 EP400Q96L91 3159 aa0.57□□□□□ -2.32
SPCS3-202ENST00000507001 KALRNO60229 2985 aa0.57□□□□□ -2.32
SPCS3-202ENST00000507001 DNAH3Q8TD57 4116 aa0.57□□□□□ -2.32
SPCS3-202ENST00000507001 TRRAPQ9Y4A5 3859 aa0.57□□□□□ -2.32
SPCS3-202ENST00000507001 UNC80Q8N2C7 3258 aa0.56□□□□□ -2.32
SPCS3-202ENST00000507001 CFAP46Q8IYW2 2715 aa0.56□□□□□ -2.32
SPCS3-202ENST00000507001 DNAH10Q8IVF4 4471 aa0.56□□□□□ -2.32
SPCS3-202ENST00000507001 TLN1Q9Y490 2541 aaKnown RBP0.56□□□□□ -2.32
SPCS3-202ENST00000507001 LYSTQ99698 3801 aa0.56□□□□□ -2.32
SPCS3-202ENST00000507001 SETXQ7Z333 2677 aaKnown RBP0.56□□□□□ -2.32
SPCS3-202ENST00000507001 DNAH7Q8WXX0 4024 aa0.56□□□□□ -2.32
SPCS3-202ENST00000507001 DYNC2H1Q8NCM8 4307 aaKnown RBP0.56□□□□□ -2.32
SPCS3-202ENST00000507001 CMYA5Q8N3K9 4069 aa0.56□□□□□ -2.32
SPCS3-202ENST00000507001 PRKDCP78527 4128 aaKnown RBP0.56□□□□□ -2.32
SPCS3-202ENST00000507001 PKHD1L1Q86WI1 4243 aa0.56□□□□□ -2.32
SPCS3-202ENST00000507001 LAMA2P24043 3122 aaKnown RBP0.55□□□□□ -2.32
SPCS3-202ENST00000507001 TACC2O95359 2948 aa0.55□□□□□ -2.32
SPCS3-202ENST00000507001 TGP01266 2768 aa0.55□□□□□ -2.32
SPCS3-202ENST00000507001 DEFB133Q30KQ1 61 aa0.55□□□□□ -2.32
SPCS3-202ENST00000507001 CHD8Q9HCK8 2581 aa0.55□□□□□ -2.32
SPCS3-202ENST00000507001 GCN1Q92616 2671 aaKnown RBP0.55□□□□□ -2.32
SPCS3-202ENST00000507001 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
SPCS3-202ENST00000507001 TNXBP22105 4242 aa0.55□□□□□ -2.32
SPCS3-202ENST00000507001 DNAH2Q9P225 4427 aa0.54□□□□□ -2.32
SPCS3-202ENST00000507001 U3KQA8 63 aa0.54□□□□□ -2.32
SPCS3-202ENST00000507001 BRCA2P51587 3418 aa0.54□□□□□ -2.32
SPCS3-202ENST00000507001 USP9XQ93008 2570 aaPredicted RBP0.54□□□□□ -2.32
SPCS3-202ENST00000507001 STAB1Q9NY15 2570 aa0.54□□□□□ -2.32
SPCS3-202ENST00000507001 TEP1Q99973 2627 aaKnown RBP0.54□□□□□ -2.32
SPCS3-202ENST00000507001 FLGP20930 4061 aaPredicted RBP0.54□□□□□ -2.32
SPCS3-202ENST00000507001 HIVEP1P15822 2718 aa0.54□□□□□ -2.32
SPCS3-202ENST00000507001 DOPEY1Q5JWR5 2465 aa0.54□□□□□ -2.32
SPCS3-202ENST00000507001 MTORP42345 2549 aa0.54□□□□□ -2.32
SPCS3-202ENST00000507001 DNAH1Q9P2D7 4330 aa0.53□□□□□ -2.32
SPCS3-202ENST00000507001 ITPR2Q14571 2701 aa0.53□□□□□ -2.32
SPCS3-202ENST00000507001 ANK3Q12955 4377 aaKnown RBP0.53□□□□□ -2.32
SPCS3-202ENST00000507001 FAT3Q8TDW7 4589 aa0.53□□□□□ -2.32
SPCS3-202ENST00000507001 UNC79Q9P2D8 2635 aa0.53□□□□□ -2.32
SPCS3-202ENST00000507001 TEX15Q9BXT5 2789 aa0.53□□□□□ -2.32
SPCS3-202ENST00000507001 CSMD2Q7Z408 3487 aa0.53□□□□□ -2.32
SPCS3-202ENST00000507001 HUWE1Q7Z6Z7 4374 aaKnown RBP0.53□□□□□ -2.32
SPCS3-202ENST00000507001 MYO15AQ9UKN7 3530 aa0.52□□□□□ -2.33
SPCS3-202ENST00000507001 DNAH9Q9NYC9 4486 aa0.52□□□□□ -2.33
SPCS3-202ENST00000507001 VCANP13611 3396 aa0.52□□□□□ -2.33
SPCS3-202ENST00000507001 APOBP04114 4563 aaKnown RBP0.52□□□□□ -2.33
SPCS3-202ENST00000507001 WDFY3Q8IZQ1 3526 aa0.52□□□□□ -2.33
SPCS3-202ENST00000507001 ZFYVE26Q68DK2 2539 aa0.52□□□□□ -2.33
SPCS3-202ENST00000507001 TLN2Q9Y4G6 2542 aa0.52□□□□□ -2.33
SPCS3-202ENST00000507001 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
SPCS3-202ENST00000507001 ANKRD11Q6UB99 2663 aaPredicted RBP0.52□□□□□ -2.33
SPCS3-202ENST00000507001 PKD1L1Q8TDX9 2849 aa0.52□□□□□ -2.33
SPCS3-202ENST00000507001 ZANQ9Y493 2812 aa0.52□□□□□ -2.33
SPCS3-202ENST00000507001 PKD1P98161 4303 aa0.52□□□□□ -2.33
SPCS3-202ENST00000507001 ACACBO00763 2458 aa0.52□□□□□ -2.33
SPCS3-202ENST00000507001 CUBNO60494 3623 aa0.51□□□□□ -2.33
SPCS3-202ENST00000507001 HECTD4Q9Y4D8 3996 aa0.51□□□□□ -2.33
SPCS3-202ENST00000507001 HSPG2P98160 4391 aa0.51□□□□□ -2.33
SPCS3-202ENST00000507001 PLECQ15149 4684 aaKnown RBP0.51□□□□□ -2.33
SPCS3-202ENST00000507001 NBEAL2Q6ZNJ1 2754 aa0.51□□□□□ -2.33
SPCS3-202ENST00000507001 MXRA5Q9NR99 2828 aa0.51□□□□□ -2.33
SPCS3-202ENST00000507001 DNAH17Q9UFH2 4485 aa0.51□□□□□ -2.33
SPCS3-202ENST00000507001 FAT2Q9NYQ8 4349 aa0.51□□□□□ -2.33
SPCS3-202ENST00000507001 NBEAL1Q6ZS30 2694 aa0.51□□□□□ -2.33
SPCS3-202ENST00000507001 MYO18BQ8IUG5 2567 aa0.51□□□□□ -2.33
SPCS3-202ENST00000507001 DNAH6Q9C0G6 4158 aa0.5□□□□□ -2.33
SPCS3-202ENST00000507001 STAB2Q8WWQ8 2551 aa0.5□□□□□ -2.33
SPCS3-202ENST00000507001 SVEP1Q4LDE5 3571 aa0.5□□□□□ -2.33
SPCS3-202ENST00000507001 DNAH14Q0VDD8 3507 aa0.5□□□□□ -2.33
SPCS3-202ENST00000507001 ADGRG4Q8IZF6 3080 aa0.5□□□□□ -2.33
SPCS3-202ENST00000507001 LRP1Q07954 4544 aaKnown RBP0.5□□□□□ -2.33
SPCS3-202ENST00000507001 FLNAP21333 2647 aaKnown RBP0.5□□□□□ -2.33
SPCS3-202ENST00000507001 DNAH5Q8TE73 4624 aa0.49□□□□□ -2.33
SPCS3-202ENST00000507001 HRNRQ86YZ3 2850 aaPredicted RBP0.49□□□□□ -2.33
SPCS3-202ENST00000507001 CEP295Q9C0D2 2601 aa0.49□□□□□ -2.33
SPCS3-202ENST00000507001 KRTAP19-5Q3LI72 72 aa0.49□□□□□ -2.33
SPCS3-202ENST00000507001 PKHD1P08F94 4074 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms