RNA–Protein interactions for RNA: ENST00000497236.1

CRIM1-208, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 240 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-208ENST00000497236 ANK3Q12955 4377 aaKnown RBP1.45□□□□□ -2.18
CRIM1-208ENST00000497236 VPS13CQ709C8 3753 aa1.44□□□□□ -2.18
CRIM1-208ENST00000497236 KRTAP12-1P59990 96 aa1.44□□□□□ -2.18
CRIM1-208ENST00000497236 CSMD2Q7Z408 3487 aa1.44□□□□□ -2.18
CRIM1-208ENST00000497236 INE1O15225 51 aa1.43□□□□□ -2.18
CRIM1-208ENST00000497236 PRO2289Q9P1D8 64 aa1.43□□□□□ -2.18
CRIM1-208ENST00000497236 MGAM2Q2M2H8 2515 aa1.43□□□□□ -2.18
CRIM1-208ENST00000497236 KRTAP12-2P59991 146 aa1.42□□□□□ -2.18
CRIM1-208ENST00000497236 KRTAP9-8Q9BYQ0 159 aa1.42□□□□□ -2.18
CRIM1-208ENST00000497236 C10orf95Q9H7T3 257 aa1.42□□□□□ -2.18
CRIM1-208ENST00000497236 KRTAP13-4Q3LI77 160 aa1.41□□□□□ -2.18
CRIM1-208ENST00000497236 DMBT1Q9UGM3 2413 aaPredicted RBP1.4□□□□□ -2.18
CRIM1-208ENST00000497236 DNAH8Q96JB1 4490 aa1.4□□□□□ -2.19
CRIM1-208ENST00000497236 LCE1AQ5T7P2 110 aa1.4□□□□□ -2.19
CRIM1-208ENST00000497236 C9orf92A6NGG3 77 aa1.39□□□□□ -2.19
CRIM1-208ENST00000497236 VPS13DQ5THJ4 4388 aa1.39□□□□□ -2.19
CRIM1-208ENST00000497236 DNAH3Q8TD57 4116 aa1.38□□□□□ -2.19
CRIM1-208ENST00000497236 KRTAP10-1P60331 282 aa1.38□□□□□ -2.19
CRIM1-208ENST00000497236 R4GN34 69 aa1.38□□□□□ -2.19
CRIM1-208ENST00000497236 DYNC2H1Q8NCM8 4307 aaKnown RBP1.38□□□□□ -2.19
CRIM1-208ENST00000497236 DNAH17Q9UFH2 4485 aa1.38□□□□□ -2.19
CRIM1-208ENST00000497236 DNAH10Q8IVF4 4471 aa1.38□□□□□ -2.19
CRIM1-208ENST00000497236 CUBNO60494 3623 aa1.38□□□□□ -2.19
CRIM1-208ENST00000497236 SPRR5A0A1B0GTR4 108 aa1.37□□□□□ -2.19
CRIM1-208ENST00000497236 Q5VSD8 79 aa1.37□□□□□ -2.19
CRIM1-208ENST00000497236 FBN3Q75N90 2809 aa1.35□□□□□ -2.19
CRIM1-208ENST00000497236 TNP1P09430 55 aa1.35□□□□□ -2.19
CRIM1-208ENST00000497236 TRRAPQ9Y4A5 3859 aa1.35□□□□□ -2.19
CRIM1-208ENST00000497236 HUWE1Q7Z6Z7 4374 aaKnown RBP1.35□□□□□ -2.19
CRIM1-208ENST00000497236 DNAH11Q96DT5 4516 aa1.34□□□□□ -2.19
CRIM1-208ENST00000497236 DNAH2Q9P225 4427 aa1.34□□□□□ -2.19
CRIM1-208ENST00000497236 MT3P25713 68 aa1.34□□□□□ -2.19
CRIM1-208ENST00000497236 DNAH9Q9NYC9 4486 aa1.34□□□□□ -2.2
CRIM1-208ENST00000497236 ZNF469Q96JG9 3925 aaPredicted RBP1.33□□□□□ -2.2
CRIM1-208ENST00000497236 HECTD4Q9Y4D8 3996 aa1.32□□□□□ -2.2
CRIM1-208ENST00000497236 FRAS1Q86XX4 4008 aa1.32□□□□□ -2.2
CRIM1-208ENST00000497236 KRTAP10-8P60410 259 aa1.32□□□□□ -2.2
CRIM1-208ENST00000497236 LYSTQ99698 3801 aa1.32□□□□□ -2.2
CRIM1-208ENST00000497236 DNAH6Q9C0G6 4158 aa1.32□□□□□ -2.2
CRIM1-208ENST00000497236 LRP1BQ9NZR2 4599 aa1.3□□□□□ -2.2
CRIM1-208ENST00000497236 PRKDCP78527 4128 aaKnown RBP1.3□□□□□ -2.2
CRIM1-208ENST00000497236 PLECQ15149 4684 aaKnown RBP1.3□□□□□ -2.2
CRIM1-208ENST00000497236 KRTAP2-2Q9BYT5 123 aa1.3□□□□□ -2.2
CRIM1-208ENST00000497236 ANK2Q01484 3957 aa1.29□□□□□ -2.2
CRIM1-208ENST00000497236 CMYA5Q8N3K9 4069 aa1.29□□□□□ -2.2
CRIM1-208ENST00000497236 KRTAP10-4P60372 401 aaPredicted RBP1.29□□□□□ -2.2
CRIM1-208ENST00000497236 SACSQ9NZJ4 4579 aa1.28□□□□□ -2.2
CRIM1-208ENST00000497236 DNAH7Q8WXX0 4024 aa1.27□□□□□ -2.21
CRIM1-208ENST00000497236 KRTAP10-7P60409 375 aaPredicted RBP1.25□□□□□ -2.21
CRIM1-208ENST00000497236 CSMD3Q7Z407 3707 aa1.25□□□□□ -2.21
CRIM1-208ENST00000497236 STARD9Q9P2P6 4700 aa1.24□□□□□ -2.21
CRIM1-208ENST00000497236 VPS13BQ7Z7G8 4022 aa1.24□□□□□ -2.21
CRIM1-208ENST00000497236 A0A1B0GVY2 172 aa1.24□□□□□ -2.21
CRIM1-208ENST00000497236 SMR3BP02814 79 aaPredicted RBP1.24□□□□□ -2.21
CRIM1-208ENST00000497236 DYNC1H1Q14204 4646 aaKnown RBP1.24□□□□□ -2.21
CRIM1-208ENST00000497236 PKHD1L1Q86WI1 4243 aa1.23□□□□□ -2.21
CRIM1-208ENST00000497236 DNAH5Q8TE73 4624 aa1.23□□□□□ -2.21
CRIM1-208ENST00000497236 APOBP04114 4563 aaKnown RBP1.22□□□□□ -2.21
CRIM1-208ENST00000497236 LRP1Q07954 4544 aaKnown RBP1.22□□□□□ -2.21
CRIM1-208ENST00000497236 LCE1EQ5T753 118 aa1.21□□□□□ -2.22
CRIM1-208ENST00000497236 GPR98Q8WXG9 6306 aa1.21□□□□□ -2.22
CRIM1-208ENST00000497236 PKD1P98161 4303 aa1.21□□□□□ -2.22
CRIM1-208ENST00000497236 PKHD1P08F94 4074 aa1.2□□□□□ -2.22
CRIM1-208ENST00000497236 KRTAP8-1Q8IUC2 63 aa1.2□□□□□ -2.22
CRIM1-208ENST00000497236 FAT3Q8TDW7 4589 aa1.2□□□□□ -2.22
CRIM1-208ENST00000497236 FAT2Q9NYQ8 4349 aa1.19□□□□□ -2.22
CRIM1-208ENST00000497236 KMT2AQ03164 3969 aa1.18□□□□□ -2.22
CRIM1-208ENST00000497236 KRTAP21-3Q3LHN1 58 aa1.18□□□□□ -2.22
CRIM1-208ENST00000497236 TNXBP22105 4242 aa1.18□□□□□ -2.22
CRIM1-208ENST00000497236 FAT1Q14517 4588 aa1.17□□□□□ -2.22
CRIM1-208ENST00000497236 KRTAP5-11Q6L8G4 156 aa1.17□□□□□ -2.22
CRIM1-208ENST00000497236 MYCBP2O75592 4640 aa1.17□□□□□ -2.22
CRIM1-208ENST00000497236 MT1HL1P0DM35 61 aa1.16□□□□□ -2.22
CRIM1-208ENST00000497236 SPRR2GQ9BYE4 73 aa1.16□□□□□ -2.22
CRIM1-208ENST00000497236 HSPG2P98160 4391 aa1.16□□□□□ -2.22
CRIM1-208ENST00000497236 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.15□□□□□ -2.23
CRIM1-208ENST00000497236 KRTAP10-10P60014 251 aa1.13□□□□□ -2.23
CRIM1-208ENST00000497236 KRTAP12-3P60328 96 aa1.13□□□□□ -2.23
CRIM1-208ENST00000497236 KRTAP10-5P60370 271 aa1.13□□□□□ -2.23
CRIM1-208ENST00000497236 DNHD1Q96M86 4753 aa1.12□□□□□ -2.23
CRIM1-208ENST00000497236 KRTAP10-12P60413 245 aa1.12□□□□□ -2.23
CRIM1-208ENST00000497236 LCE3AQ5TA76 89 aa1.12□□□□□ -2.23
CRIM1-208ENST00000497236 FLGP20930 4061 aaPredicted RBP1.11□□□□□ -2.23
CRIM1-208ENST00000497236 KRTAP19-2Q3LHN2 52 aa1.11□□□□□ -2.23
CRIM1-208ENST00000497236 LCE1FQ5T754 118 aa1.11□□□□□ -2.23
CRIM1-208ENST00000497236 MUC17Q685J3 4493 aa1.09□□□□□ -2.23
CRIM1-208ENST00000497236 KRTAP19-8Q3LI54 63 aa1.09□□□□□ -2.23
CRIM1-208ENST00000497236 HERC1Q15751 4861 aa1.09□□□□□ -2.24
CRIM1-208ENST00000497236 M0R2T5 61 aa1.08□□□□□ -2.24
CRIM1-208ENST00000497236 KRTAP2-3P0C7H8 128 aa1.08□□□□□ -2.24
CRIM1-208ENST00000497236 LCE3CQ5T5A8 94 aa1.08□□□□□ -2.24
CRIM1-208ENST00000497236 KRTAP2-4Q9BYR9 128 aa1.08□□□□□ -2.24
CRIM1-208ENST00000497236 KRTAP2-1Q9BYU5 128 aa1.08□□□□□ -2.24
CRIM1-208ENST00000497236 LRP2P98164 4655 aa1.07□□□□□ -2.24
CRIM1-208ENST00000497236 KRTAP9-6A8MVA2 160 aa1.06□□□□□ -2.24
CRIM1-208ENST00000497236 RYR2Q92736 4967 aa1.05□□□□□ -2.24
CRIM1-208ENST00000497236 LPAP08519 4548 aa1.04□□□□□ -2.24
CRIM1-208ENST00000497236 KRTAP4-1Q9BYQ7 146 aa1.04□□□□□ -2.24
CRIM1-208ENST00000497236 RYR1P21817 5038 aa1.02□□□□□ -2.25
CRIM1-208ENST00000497236 HYDINQ4G0P3 5121 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms