RNA–Protein interactions for RNA: ENST00000497236.1

CRIM1-208, Transcript of cysteine rich transmembrane BMP regulator 1, human

TSL 3

Gene CRIM1, Length 240 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRIM1-208	ENST00000497236	AEBP2	Q6ZN18	517 aa	Predicted RBP	7.37	□□□□□ -1.23
CRIM1-208	ENST00000497236	CHIC1	Q5VXU3	224 aa		7.19	□□□□□ -1.26
CRIM1-208	ENST00000497236	SENP3	Q9H4L4	574 aa	Predicted RBP	6.34	□□□□□ -1.39
CRIM1-208	ENST00000497236	PHF23	Q9BUL5	403 aa	Predicted RBP	6.28	□□□□□ -1.4
CRIM1-208	ENST00000497236	PLPPR3	Q6T4P5	718 aa		5.86	□□□□□ -1.47
CRIM1-208	ENST00000497236	FOXD1	Q16676	465 aa		5.84	□□□□□ -1.47
CRIM1-208	ENST00000497236	ADRA2B	P18089	450 aa		5.56	□□□□□ -1.52
CRIM1-208	ENST00000497236	PPP6R1	Q9UPN7	881 aa		5.55	□□□□□ -1.52
CRIM1-208	ENST00000497236	PIAS4	Q8N2W9	510 aa	Predicted RBP	5.53	□□□□□ -1.52
CRIM1-208	ENST00000497236	MSH5	O43196	834 aa		5.47	□□□□□ -1.53
CRIM1-208	ENST00000497236	SCAF1	Q9H7N4	1312 aa	Known RBP	5.19	□□□□□ -1.58
CRIM1-208	ENST00000497236	PPP4R3CP	Q6ZMV5	832 aa		5.13	□□□□□ -1.59
CRIM1-208	ENST00000497236	MAPK8IP2	Q13387	824 aa	Predicted RBP	5.05	□□□□□ -1.6
CRIM1-208	ENST00000497236	NCBP3	Q53F19	620 aa	Known RBP	5.04	□□□□□ -1.6
CRIM1-208	ENST00000497236	DMRT2	Q9Y5R5	561 aa		5.03	□□□□□ -1.6
CRIM1-208	ENST00000497236	PELP1	Q8IZL8	1130 aa	Known RBP	5.02	□□□□□ -1.61
CRIM1-208	ENST00000497236	CNKSR2	Q8WXI2	1034 aa		5.02	□□□□□ -1.61
CRIM1-208	ENST00000497236	POTED	Q86YR6	584 aa		5.01	□□□□□ -1.61
CRIM1-208	ENST00000497236	MYT1	Q01538	1121 aa		4.98	□□□□□ -1.61
CRIM1-208	ENST00000497236	KCNA4	P22459	653 aa		4.93	□□□□□ -1.62
CRIM1-208	ENST00000497236	RNF216	Q9NWF9	866 aa	Predicted RBP	4.93	□□□□□ -1.62
CRIM1-208	ENST00000497236	HOXD11	P31277	338 aa	Predicted RBP	4.9	□□□□□ -1.63
CRIM1-208	ENST00000497236	NPM3	O75607	178 aa	Known RBP	4.89	□□□□□ -1.63
CRIM1-208	ENST00000497236	NISCH	Q9Y2I1	1504 aa		4.87	□□□□□ -1.63
CRIM1-208	ENST00000497236	DCAF8L1	A6NGE4	600 aa		4.85	□□□□□ -1.63
CRIM1-208	ENST00000497236	DNAJC5B	Q9UF47	199 aa		4.78	□□□□□ -1.64
CRIM1-208	ENST00000497236	TTBK1	Q5TCY1	1321 aa	Predicted RBP	4.75	□□□□□ -1.65
CRIM1-208	ENST00000497236	SLC4A1AP	Q9BWU0	796 aa	Known RBP	4.72	□□□□□ -1.65
CRIM1-208	ENST00000497236	HRC	P23327	699 aa		4.71	□□□□□ -1.66
CRIM1-208	ENST00000497236	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	4.71	□□□□□ -1.66
CRIM1-208	ENST00000497236	RNF39	Q9H2S5	420 aa		4.64	□□□□□ -1.67
CRIM1-208	ENST00000497236	ZEB1	P37275	1124 aa	Predicted RBP	4.62	□□□□□ -1.67
CRIM1-208	ENST00000497236	SLC4A2	P04920	1241 aa		4.61	□□□□□ -1.67
CRIM1-208	ENST00000497236	C1QBP	Q07021	282 aa	Known RBP	4.61	□□□□□ -1.67
CRIM1-208	ENST00000497236	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	4.59	□□□□□ -1.67
CRIM1-208	ENST00000497236	CACNB1	Q02641	598 aa	Predicted RBP	4.59	□□□□□ -1.67
CRIM1-208	ENST00000497236	HNRNPUL2	Q1KMD3	747 aa	Known RBP	4.59	□□□□□ -1.67
CRIM1-208	ENST00000497236	FOXD4L1	Q9NU39	408 aa		4.58	□□□□□ -1.68
CRIM1-208	ENST00000497236		U3KPZ7	1027 aa	Predicted RBP	4.58	□□□□□ -1.68
CRIM1-208	ENST00000497236	APLP2	Q06481	763 aa		4.57	□□□□□ -1.68
CRIM1-208	ENST00000497236	MYCN	P04198	464 aa	Predicted RBP	4.56	□□□□□ -1.68
CRIM1-208	ENST00000497236	SAMD1	Q6SPF0	538 aa	Predicted RBP	4.55	□□□□□ -1.68
CRIM1-208	ENST00000497236	EHMT2	Q96KQ7	1210 aa		4.52	□□□□□ -1.69
CRIM1-208	ENST00000497236	ZBTB22	O15209	634 aa		4.5	□□□□□ -1.69
CRIM1-208	ENST00000497236	CAPN15	O75808	1086 aa		4.49	□□□□□ -1.69
CRIM1-208	ENST00000497236	DCAF1	Q9Y4B6	1507 aa		4.47	□□□□□ -1.69
CRIM1-208	ENST00000497236	ZNF219	Q9P2Y4	722 aa	Predicted RBP	4.47	□□□□□ -1.69
CRIM1-208	ENST00000497236	CSRNP3	Q8WYN3	585 aa		4.46	□□□□□ -1.7
CRIM1-208	ENST00000497236	SPINK5	Q9NQ38	1064 aa	Predicted RBP	4.46	□□□□□ -1.7
CRIM1-208	ENST00000497236	CENPB	P07199	599 aa	Predicted RBP	4.45	□□□□□ -1.7
CRIM1-208	ENST00000497236	ATXN8OS	P0DMR3	200 aa		4.45	□□□□□ -1.7
CRIM1-208	ENST00000497236	TRH	P20396	242 aa	Predicted RBP	4.45	□□□□□ -1.7
CRIM1-208	ENST00000497236	TRIM26	Q12899	539 aa	Predicted RBP	4.45	□□□□□ -1.7
CRIM1-208	ENST00000497236	PCGF6	Q9BYE7	350 aa		4.44	□□□□□ -1.7
CRIM1-208	ENST00000497236	CLSPN	Q9HAW4	1339 aa		4.42	□□□□□ -1.7
CRIM1-208	ENST00000497236	DSG3	P32926	999 aa		4.39	□□□□□ -1.71
CRIM1-208	ENST00000497236	ERICH6	Q7L0X2	663 aa		4.38	□□□□□ -1.71
CRIM1-208	ENST00000497236	ACIN1	Q9UKV3	1341 aa	Known RBP	4.38	□□□□□ -1.71
CRIM1-208	ENST00000497236	ABCB7	O75027	752 aa		4.37	□□□□□ -1.71
CRIM1-208	ENST00000497236	ATF5	Q9Y2D1	282 aa	Predicted RBP	4.37	□□□□□ -1.71
CRIM1-208	ENST00000497236	CCDC180	Q9P1Z9	1646 aa		4.36	□□□□□ -1.71
CRIM1-208	ENST00000497236	POLA2	Q14181	598 aa		4.36	□□□□□ -1.71
CRIM1-208	ENST00000497236	ZBTB12	Q9Y330	459 aa	Predicted RBP	4.34	□□□□□ -1.71
CRIM1-208	ENST00000497236	PPARGC1B	Q86YN6	1023 aa	Known RBP	4.33	□□□□□ -1.72
CRIM1-208	ENST00000497236	FBLN2	P98095	1184 aa		4.29	□□□□□ -1.72
CRIM1-208	ENST00000497236	MYT1L	Q9UL68	1186 aa		4.29	□□□□□ -1.72
CRIM1-208	ENST00000497236	GTF3C3	Q9Y5Q9	886 aa		4.28	□□□□□ -1.72
CRIM1-208	ENST00000497236	SUPT5H	O00267	1087 aa	Known RBP	4.27	□□□□□ -1.73
CRIM1-208	ENST00000497236	RBM42	Q9BTD8	480 aa	Known RBP	4.25	□□□□□ -1.73
CRIM1-208	ENST00000497236	NEUROD1	Q13562	356 aa		4.24	□□□□□ -1.73
CRIM1-208	ENST00000497236	DIEXF	Q68CQ4	756 aa	Known RBP	4.23	□□□□□ -1.73
CRIM1-208	ENST00000497236	ANP32E	Q9BTT0	268 aa		4.23	□□□□□ -1.73
CRIM1-208	ENST00000497236	BCL11A	Q9H165	835 aa		4.21	□□□□□ -1.74
CRIM1-208	ENST00000497236	MYO15B	Q96JP2	1530 aa		4.21	□□□□□ -1.74
CRIM1-208	ENST00000497236	OSCAR	Q8IYS5	282 aa		4.2	□□□□□ -1.74
CRIM1-208	ENST00000497236	MKRN4P	Q13434	485 aa	Predicted RBP	4.19	□□□□□ -1.74
CRIM1-208	ENST00000497236	SPDYE2B	A6NHP3	402 aa		4.18	□□□□□ -1.74
CRIM1-208	ENST00000497236	SPDYE6	P0CI01	402 aa		4.18	□□□□□ -1.74
CRIM1-208	ENST00000497236	SPDYE2	Q495Y8	402 aa		4.18	□□□□□ -1.74
CRIM1-208	ENST00000497236	TRIM41	Q8WV44	630 aa		4.18	□□□□□ -1.74
CRIM1-208	ENST00000497236	ZNF316	A6NFI3	1004 aa	Predicted RBP	4.17	□□□□□ -1.74
CRIM1-208	ENST00000497236	CCER1	Q8TC90	406 aa	Predicted RBP	4.16	□□□□□ -1.74
CRIM1-208	ENST00000497236	AKT1S1	Q96B36	256 aa		4.16	□□□□□ -1.74
CRIM1-208	ENST00000497236	ZNF692	Q9BU19	519 aa	Predicted RBP	4.16	□□□□□ -1.74
CRIM1-208	ENST00000497236	ZCCHC6	Q5VYS8	1495 aa	Known RBP	4.16	□□□□□ -1.74
CRIM1-208	ENST00000497236	ERICH6B	Q5W0A0	696 aa		4.14	□□□□□ -1.75
CRIM1-208	ENST00000497236	SHROOM4	Q9ULL8	1493 aa		4.13	□□□□□ -1.75
CRIM1-208	ENST00000497236	LOC105371045	A0A1W2PR82	267 aa		4.13	□□□□□ -1.75
CRIM1-208	ENST00000497236	SPDYE4	A6NLX3	237 aa		4.13	□□□□□ -1.75
CRIM1-208	ENST00000497236	SSUH2	Q9Y2M2	353 aa		4.12	□□□□□ -1.75
CRIM1-208	ENST00000497236	REM2	Q8IYK8	340 aa	Predicted RBP	4.1	□□□□□ -1.75
CRIM1-208	ENST00000497236	PRKCSH	P14314	528 aa	Predicted RBP	4.09	□□□□□ -1.75
CRIM1-208	ENST00000497236	PABPN1	Q86U42	306 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
CRIM1-208	ENST00000497236	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.09	□□□□□ -1.75
CRIM1-208	ENST00000497236	WRN	Q14191	1432 aa	Predicted RBP eCLIP	4.08	□□□□□ -1.76
CRIM1-208	ENST00000497236	SPDYE1	Q8NFV5	336 aa	Predicted RBP	4.08	□□□□□ -1.76
CRIM1-208	ENST00000497236	FANCI	Q9NVI1	1328 aa		4.07	□□□□□ -1.76
CRIM1-208	ENST00000497236	FKBP8	Q14318	412 aa		4.07	□□□□□ -1.76
CRIM1-208	ENST00000497236	TSHZ2	Q9NRE2	1034 aa		4.07	□□□□□ -1.76
CRIM1-208	ENST00000497236	SUPT16H	Q9Y5B9	1047 aa	Known RBP	4.07	□□□□□ -1.76

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