RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 VPS13BQ7Z7G8 4022 aa5.74□□□□□ -1.49
COL2A1-208ENST00000493991 M0R2T5 61 aa5.73□□□□□ -1.49
COL2A1-208ENST00000493991 PKHD1P08F94 4074 aa5.72□□□□□ -1.49
COL2A1-208ENST00000493991 SEC61BP60468 96 aaKnown RBP5.72□□□□□ -1.49
COL2A1-208ENST00000493991 R4GN34 69 aa5.72□□□□□ -1.49
COL2A1-208ENST00000493991 FAT3Q8TDW7 4589 aa5.71□□□□□ -1.5
COL2A1-208ENST00000493991 M0QZ58 72 aa5.7□□□□□ -1.5
COL2A1-208ENST00000493991 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
COL2A1-208ENST00000493991 DYNC2H1Q8NCM8 4307 aaKnown RBP5.69□□□□□ -1.5
COL2A1-208ENST00000493991 RYR1P21817 5038 aa5.68□□□□□ -1.5
COL2A1-208ENST00000493991 KRTAP3-1Q9BYR8 98 aa5.68□□□□□ -1.5
COL2A1-208ENST00000493991 KRTAP4-5Q9BYR2 181 aa5.68□□□□□ -1.5
COL2A1-208ENST00000493991 KRTAP10-4P60372 401 aaPredicted RBP5.67□□□□□ -1.5
COL2A1-208ENST00000493991 KMT2CQ8NEZ4 4911 aaKnown RBP5.65□□□□□ -1.51
COL2A1-208ENST00000493991 P0C880 135 aa5.64□□□□□ -1.51
COL2A1-208ENST00000493991 CAMK2N1Q7Z7J9 78 aa5.64□□□□□ -1.51
COL2A1-208ENST00000493991 LUZP6Q538Z0 58 aa5.64□□□□□ -1.51
COL2A1-208ENST00000493991 ALMS1Q8TCU4 4167 aa5.64□□□□□ -1.51
COL2A1-208ENST00000493991 FAT2Q9NYQ8 4349 aa5.62□□□□□ -1.51
COL2A1-208ENST00000493991 SACSQ9NZJ4 4579 aa5.61□□□□□ -1.51
COL2A1-208ENST00000493991 RYR3Q15413 4870 aa5.61□□□□□ -1.51
COL2A1-208ENST00000493991 APOBP04114 4563 aaKnown RBP5.6□□□□□ -1.51
COL2A1-208ENST00000493991 MT1HL1P0DM35 61 aa5.57□□□□□ -1.52
COL2A1-208ENST00000493991 TPRXLQ17RH7 258 aa5.56□□□□□ -1.52
COL2A1-208ENST00000493991 KRTAP13-4Q3LI77 160 aa5.53□□□□□ -1.52
COL2A1-208ENST00000493991 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
COL2A1-208ENST00000493991 KRTAP17-1Q9BYP8 105 aa5.49□□□□□ -1.53
COL2A1-208ENST00000493991 KRTAP12-2P59991 146 aa5.46□□□□□ -1.54
COL2A1-208ENST00000493991 PKD1P98161 4303 aa5.46□□□□□ -1.54
COL2A1-208ENST00000493991 RYR2Q92736 4967 aa5.42□□□□□ -1.54
COL2A1-208ENST00000493991 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.54
COL2A1-208ENST00000493991 LRP2P98164 4655 aa5.4□□□□□ -1.55
COL2A1-208ENST00000493991 KRTAP3-3Q9BYR6 98 aa5.36□□□□□ -1.55
COL2A1-208ENST00000493991 PLAC4Q8WY50 150 aa5.36□□□□□ -1.55
COL2A1-208ENST00000493991 KRTAP12-1P59990 96 aa5.32□□□□□ -1.56
COL2A1-208ENST00000493991 HSPG2P98160 4391 aa5.28□□□□□ -1.56
COL2A1-208ENST00000493991 KRTAP3-2Q9BYR7 98 aa5.28□□□□□ -1.56
COL2A1-208ENST00000493991 EPPK1P58107 5090 aaKnown RBP5.28□□□□□ -1.56
COL2A1-208ENST00000493991 HERC2O95714 4834 aa5.27□□□□□ -1.57
COL2A1-208ENST00000493991 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
COL2A1-208ENST00000493991 LPAP08519 4548 aa5.22□□□□□ -1.57
COL2A1-208ENST00000493991 KRTAP10-10P60014 251 aa5.2□□□□□ -1.58
COL2A1-208ENST00000493991 KRTAP4-1Q9BYQ7 146 aa5.19□□□□□ -1.58
COL2A1-208ENST00000493991 LORP23490 312 aaPredicted RBP5.17□□□□□ -1.58
COL2A1-208ENST00000493991 PKHD1L1Q86WI1 4243 aa5.16□□□□□ -1.58
COL2A1-208ENST00000493991 MUC2Q02817 5179 aa5.11□□□□□ -1.59
COL2A1-208ENST00000493991 ABCA13Q86UQ4 5058 aa5.09□□□□□ -1.59
COL2A1-208ENST00000493991 TNP1P09430 55 aa5.07□□□□□ -1.6
COL2A1-208ENST00000493991 PCLOQ9Y6V0 5065 aa5.03□□□□□ -1.6
COL2A1-208ENST00000493991 TNXBP22105 4242 aa5.03□□□□□ -1.6
COL2A1-208ENST00000493991 HERC1Q15751 4861 aa5.01□□□□□ -1.61
COL2A1-208ENST00000493991 RNF213Q63HN8 5207 aa5.01□□□□□ -1.61
COL2A1-208ENST00000493991 FAT4Q6V0I7 4981 aa4.92□□□□□ -1.62
COL2A1-208ENST00000493991 PP632Q6XCG6 107 aa4.91□□□□□ -1.62
COL2A1-208ENST00000493991 BIRC6Q9NR09 4857 aa4.88□□□□□ -1.63
COL2A1-208ENST00000493991 UBR4Q5T4S7 5183 aa4.84□□□□□ -1.64
COL2A1-208ENST00000493991 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
COL2A1-208ENST00000493991 MT1HP80294 61 aa4.72□□□□□ -1.65
COL2A1-208ENST00000493991 MT1FP04733 61 aa4.66□□□□□ -1.66
COL2A1-208ENST00000493991 PRO2289Q9P1D8 64 aa4.65□□□□□ -1.66
COL2A1-208ENST00000493991 MT2AP02795 61 aa4.65□□□□□ -1.67
COL2A1-208ENST00000493991 LCE3AQ5TA76 89 aa4.6□□□□□ -1.67
COL2A1-208ENST00000493991 HMCN2Q8NDA2 5059 aa4.6□□□□□ -1.67
COL2A1-208ENST00000493991 MUC17Q685J3 4493 aa4.59□□□□□ -1.67
COL2A1-208ENST00000493991 LCE2CQ5TA81 110 aa4.57□□□□□ -1.68
COL2A1-208ENST00000493991 KRTAP19-2Q3LHN2 52 aa4.56□□□□□ -1.68
COL2A1-208ENST00000493991 KRTAP19-1Q8IUB9 90 aa4.54□□□□□ -1.68
COL2A1-208ENST00000493991 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
COL2A1-208ENST00000493991 FLGP20930 4061 aaPredicted RBP4.51□□□□□ -1.69
COL2A1-208ENST00000493991 SPRR2GQ9BYE4 73 aa4.5□□□□□ -1.69
COL2A1-208ENST00000493991 USH2AO75445 5202 aa4.44□□□□□ -1.7
COL2A1-208ENST00000493991 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
COL2A1-208ENST00000493991 KRTAP9-8Q9BYQ0 159 aa4.43□□□□□ -1.7
COL2A1-208ENST00000493991 CRCT1Q9UGL9 99 aa4.35□□□□□ -1.71
COL2A1-208ENST00000493991 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.72
COL2A1-208ENST00000493991 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
COL2A1-208ENST00000493991 MT1BP07438 61 aa4.32□□□□□ -1.72
COL2A1-208ENST00000493991 INE1O15225 51 aa4.31□□□□□ -1.72
COL2A1-208ENST00000493991 MT1XP80297 61 aa4.28□□□□□ -1.72
COL2A1-208ENST00000493991 KMT2DO14686 5537 aa4.27□□□□□ -1.73
COL2A1-208ENST00000493991 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
COL2A1-208ENST00000493991 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
COL2A1-208ENST00000493991 KRTAP10-5P60370 271 aa4.26□□□□□ -1.73
COL2A1-208ENST00000493991 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
COL2A1-208ENST00000493991 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
COL2A1-208ENST00000493991 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
COL2A1-208ENST00000493991 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
COL2A1-208ENST00000493991 LCE2BO14633 110 aa4.21□□□□□ -1.74
COL2A1-208ENST00000493991 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
COL2A1-208ENST00000493991 DSTQ03001 7570 aaKnown RBP4.18□□□□□ -1.74
COL2A1-208ENST00000493991 KRTAP8-1Q8IUC2 63 aa4.16□□□□□ -1.74
COL2A1-208ENST00000493991 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
COL2A1-208ENST00000493991 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
COL2A1-208ENST00000493991 KRTAP4-7Q9BYR0 210 aa4.05□□□□□ -1.76
COL2A1-208ENST00000493991 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
COL2A1-208ENST00000493991 LCE2AQ5TA79 106 aaPredicted RBP3.98□□□□□ -1.77
COL2A1-208ENST00000493991 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
COL2A1-208ENST00000493991 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
COL2A1-208ENST00000493991 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
COL2A1-208ENST00000493991 MT1GP13640 62 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 208.7 ms