RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 DNAH17Q9UFH2 4485 aa9.66□□□□□ -0.86
CHKB-CPT1B-203ENST00000492556 ALMS1Q8TCU4 4167 aa9.63□□□□□ -0.87
CHKB-CPT1B-203ENST00000492556 VPS13DQ5THJ4 4388 aa9.61□□□□□ -0.87
CHKB-CPT1B-203ENST00000492556 DNAH11Q96DT5 4516 aa9.58□□□□□ -0.88
CHKB-CPT1B-203ENST00000492556 DNAH8Q96JB1 4490 aa9.54□□□□□ -0.88
CHKB-CPT1B-203ENST00000492556 DNAH5Q8TE73 4624 aa9.49□□□□□ -0.89
CHKB-CPT1B-203ENST00000492556 DNAH3Q8TD57 4116 aa9.49□□□□□ -0.89
CHKB-CPT1B-203ENST00000492556 STARD9Q9P2P6 4700 aa9.42□□□□□ -0.9
CHKB-CPT1B-203ENST00000492556 DNAH2Q9P225 4427 aa9.4□□□□□ -0.9
CHKB-CPT1B-203ENST00000492556 LORP23490 312 aaPredicted RBP9.32□□□□□ -0.92
CHKB-CPT1B-203ENST00000492556 ANK2Q01484 3957 aa9.31□□□□□ -0.92
CHKB-CPT1B-203ENST00000492556 LRP1BQ9NZR2 4599 aa9.26□□□□□ -0.93
CHKB-CPT1B-203ENST00000492556 KRTAP23-1A1A580 65 aa9.26□□□□□ -0.93
CHKB-CPT1B-203ENST00000492556 CMYA5Q8N3K9 4069 aa9.2□□□□□ -0.94
CHKB-CPT1B-203ENST00000492556 PRKDCP78527 4128 aaKnown RBP9.15□□□□□ -0.94
CHKB-CPT1B-203ENST00000492556 INE1O15225 51 aa9.14□□□□□ -0.95
CHKB-CPT1B-203ENST00000492556 KMT2AQ03164 3969 aa9.14□□□□□ -0.95
CHKB-CPT1B-203ENST00000492556 DYNC2H1Q8NCM8 4307 aaKnown RBP9.13□□□□□ -0.95
CHKB-CPT1B-203ENST00000492556 SACSQ9NZJ4 4579 aa9.12□□□□□ -0.95
CHKB-CPT1B-203ENST00000492556 DYNC1H1Q14204 4646 aaKnown RBP9.12□□□□□ -0.95
CHKB-CPT1B-203ENST00000492556 DNHD1Q96M86 4753 aa9.11□□□□□ -0.95
CHKB-CPT1B-203ENST00000492556 KRTAP4-5Q9BYR2 181 aa9.09□□□□□ -0.95
CHKB-CPT1B-203ENST00000492556 FAT1Q14517 4588 aa9.06□□□□□ -0.96
CHKB-CPT1B-203ENST00000492556 LYSTQ99698 3801 aa9.05□□□□□ -0.96
CHKB-CPT1B-203ENST00000492556 FRAS1Q86XX4 4008 aa9.04□□□□□ -0.96
CHKB-CPT1B-203ENST00000492556 VPS13BQ7Z7G8 4022 aa8.98□□□□□ -0.97
CHKB-CPT1B-203ENST00000492556 HECTD4Q9Y4D8 3996 aa8.96□□□□□ -0.98
CHKB-CPT1B-203ENST00000492556 LCE3AQ5TA76 89 aa8.93□□□□□ -0.98
CHKB-CPT1B-203ENST00000492556 KRTAP10-12P60413 245 aa8.93□□□□□ -0.98
CHKB-CPT1B-203ENST00000492556 DNAH7Q8WXX0 4024 aa8.91□□□□□ -0.98
CHKB-CPT1B-203ENST00000492556 FAT2Q9NYQ8 4349 aa8.88□□□□□ -0.99
CHKB-CPT1B-203ENST00000492556 KRTAP12-3P60328 96 aa8.84□□□□□ -0.99
CHKB-CPT1B-203ENST00000492556 KRTAP4-1Q9BYQ7 146 aa8.84□□□□□ -0.99
CHKB-CPT1B-203ENST00000492556 DNAH6Q9C0G6 4158 aa8.82□□□□□ -1
CHKB-CPT1B-203ENST00000492556 APOBP04114 4563 aaKnown RBP8.74□□□□□ -1.01
CHKB-CPT1B-203ENST00000492556 MYCBP2O75592 4640 aa8.58□□□□□ -1.04
CHKB-CPT1B-203ENST00000492556 RYR1P21817 5038 aa8.54□□□□□ -1.04
CHKB-CPT1B-203ENST00000492556 FAT3Q8TDW7 4589 aa8.53□□□□□ -1.04
CHKB-CPT1B-203ENST00000492556 SPRR2GQ9BYE4 73 aa8.51□□□□□ -1.05
CHKB-CPT1B-203ENST00000492556 CRCT1Q9UGL9 99 aa8.5□□□□□ -1.05
CHKB-CPT1B-203ENST00000492556 HYDINQ4G0P3 5121 aa8.5□□□□□ -1.05
CHKB-CPT1B-203ENST00000492556 LRP1Q07954 4544 aaKnown RBP8.47□□□□□ -1.05
CHKB-CPT1B-203ENST00000492556 KIAA1109Q2LD37 5005 aa8.38□□□□□ -1.07
CHKB-CPT1B-203ENST00000492556 KRTAP17-1Q9BYP8 105 aa8.37□□□□□ -1.07
CHKB-CPT1B-203ENST00000492556 PKHD1P08F94 4074 aa8.33□□□□□ -1.08
CHKB-CPT1B-203ENST00000492556 PKD1P98161 4303 aa8.3□□□□□ -1.08
CHKB-CPT1B-203ENST00000492556 MT1HP80294 61 aa8.3□□□□□ -1.08
CHKB-CPT1B-203ENST00000492556 MT2AP02795 61 aa8.29□□□□□ -1.08
CHKB-CPT1B-203ENST00000492556 RYR3Q15413 4870 aa8.28□□□□□ -1.08
CHKB-CPT1B-203ENST00000492556 KRTAP8-1Q8IUC2 63 aa8.26□□□□□ -1.09
CHKB-CPT1B-203ENST00000492556 RYR2Q92736 4967 aa8.25□□□□□ -1.09
CHKB-CPT1B-203ENST00000492556 MT1FP04733 61 aa8.19□□□□□ -1.1
CHKB-CPT1B-203ENST00000492556 SPRR5A0A1B0GTR4 108 aa8.16□□□□□ -1.1
CHKB-CPT1B-203ENST00000492556 KRTAP19-1Q8IUB9 90 aa8.1□□□□□ -1.11
CHKB-CPT1B-203ENST00000492556 PKHD1L1Q86WI1 4243 aa8.1□□□□□ -1.11
CHKB-CPT1B-203ENST00000492556 LRP2P98164 4655 aa8.09□□□□□ -1.11
CHKB-CPT1B-203ENST00000492556 HSPG2P98160 4391 aa8.06□□□□□ -1.12
CHKB-CPT1B-203ENST00000492556 KRTAP19-5Q3LI72 72 aa7.96□□□□□ -1.14
CHKB-CPT1B-203ENST00000492556 LCE3CQ5T5A8 94 aa7.96□□□□□ -1.14
CHKB-CPT1B-203ENST00000492556 KRTAP19-8Q3LI54 63 aa7.94□□□□□ -1.14
CHKB-CPT1B-203ENST00000492556 KMT2CQ8NEZ4 4911 aaKnown RBP7.91□□□□□ -1.14
CHKB-CPT1B-203ENST00000492556 TNXBP22105 4242 aa7.89□□□□□ -1.15
CHKB-CPT1B-203ENST00000492556 KRTAP10-5P60370 271 aa7.84□□□□□ -1.15
CHKB-CPT1B-203ENST00000492556 KRTAP10-7P60409 375 aaPredicted RBP7.82□□□□□ -1.16
CHKB-CPT1B-203ENST00000492556 MT1XP80297 61 aa7.8□□□□□ -1.16
CHKB-CPT1B-203ENST00000492556 LPAP08519 4548 aa7.77□□□□□ -1.17
CHKB-CPT1B-203ENST00000492556 HERC2O95714 4834 aa7.75□□□□□ -1.17
CHKB-CPT1B-203ENST00000492556 KRTAP19-2Q3LHN2 52 aa7.74□□□□□ -1.17
CHKB-CPT1B-203ENST00000492556 MT1BP07438 61 aa7.71□□□□□ -1.18
CHKB-CPT1B-203ENST00000492556 LCE2CQ5TA81 110 aa7.69□□□□□ -1.18
CHKB-CPT1B-203ENST00000492556 KRTAP19-4Q3LI73 84 aa7.67□□□□□ -1.18
CHKB-CPT1B-203ENST00000492556 KRTAP9-8Q9BYQ0 159 aa7.64□□□□□ -1.19
CHKB-CPT1B-203ENST00000492556 MUC17Q685J3 4493 aa7.54□□□□□ -1.2
CHKB-CPT1B-203ENST00000492556 SPRR2FQ96RM1 72 aa7.51□□□□□ -1.21
CHKB-CPT1B-203ENST00000492556 FLGP20930 4061 aaPredicted RBP7.46□□□□□ -1.22
CHKB-CPT1B-203ENST00000492556 HERC1Q15751 4861 aa7.41□□□□□ -1.22
CHKB-CPT1B-203ENST00000492556 KRTAP9-3Q9BYQ3 159 aa7.4□□□□□ -1.22
CHKB-CPT1B-203ENST00000492556 BIRC6Q9NR09 4857 aa7.39□□□□□ -1.23
CHKB-CPT1B-203ENST00000492556 EPPK1P58107 5090 aaKnown RBP7.38□□□□□ -1.23
CHKB-CPT1B-203ENST00000492556 ABCA13Q86UQ4 5058 aa7.32□□□□□ -1.24
CHKB-CPT1B-203ENST00000492556 KRTAP4-8A0A0G2JLE6 195 aa7.29□□□□□ -1.24
CHKB-CPT1B-203ENST00000492556 KRTAP4-8Q9BYQ9 185 aa7.29□□□□□ -1.24
CHKB-CPT1B-203ENST00000492556 PCLOQ9Y6V0 5065 aa7.18□□□□□ -1.26
CHKB-CPT1B-203ENST00000492556 KRTAP12-4P60329 112 aa7.14□□□□□ -1.27
CHKB-CPT1B-203ENST00000492556 MT1GP13640 62 aa7.08□□□□□ -1.28
CHKB-CPT1B-203ENST00000492556 KRTAP4-7Q9BYR0 210 aa7.03□□□□□ -1.28
CHKB-CPT1B-203ENST00000492556 LCE2BO14633 110 aa7.01□□□□□ -1.29
CHKB-CPT1B-203ENST00000492556 SPRR2EP22531 72 aa7.01□□□□□ -1.29
CHKB-CPT1B-203ENST00000492556 SPRR2BP35325 72 aa7.01□□□□□ -1.29
CHKB-CPT1B-203ENST00000492556 SPRR2AP35326 72 aa7.01□□□□□ -1.29
CHKB-CPT1B-203ENST00000492556 MT1LQ93083 61 aa6.98□□□□□ -1.29
CHKB-CPT1B-203ENST00000492556 LCE3BQ5TA77 95 aa6.97□□□□□ -1.29
CHKB-CPT1B-203ENST00000492556 HMCN2Q8NDA2 5059 aa6.9□□□□□ -1.3
CHKB-CPT1B-203ENST00000492556 MT1EP04732 61 aa6.9□□□□□ -1.3
CHKB-CPT1B-203ENST00000492556 MUC2Q02817 5179 aa6.86□□□□□ -1.31
CHKB-CPT1B-203ENST00000492556 SYNE1Q8NF91 8797 aaKnown RBP6.85□□□□□ -1.31
CHKB-CPT1B-203ENST00000492556 RNF213Q63HN8 5207 aa6.85□□□□□ -1.31
CHKB-CPT1B-203ENST00000492556 FAT4Q6V0I7 4981 aa6.84□□□□□ -1.31
CHKB-CPT1B-203ENST00000492556 SPRR2DP22532 72 aa6.79□□□□□ -1.32
CHKB-CPT1B-203ENST00000492556 KRTAP19-3Q7Z4W3 81 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms