RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 PDCD5O14737 125 aa-0.45□□□□□ -2.48
HMGB1P30-201ENST00000492455 DEFB136Q30KP8 78 aa-0.45□□□□□ -2.48
HMGB1P30-201ENST00000492455 KRTAP19-2Q3LHN2 52 aa-0.45□□□□□ -2.48
HMGB1P30-201ENST00000492455 RANBP2P49792 3224 aaKnown RBP-0.45□□□□□ -2.48
HMGB1P30-201ENST00000492455 SPTAN1Q13813 2472 aaKnown RBP-0.45□□□□□ -2.48
HMGB1P30-201ENST00000492455 DNMBPQ6XZF7 1577 aa-0.45□□□□□ -2.48
HMGB1P30-201ENST00000492455 ITPR2Q14571 2701 aa-0.45□□□□□ -2.48
HMGB1P30-201ENST00000492455 RELNP78509 3460 aa-0.45□□□□□ -2.48
HMGB1P30-201ENST00000492455 DMXL2Q8TDJ6 3036 aa-0.46□□□□□ -2.48
HMGB1P30-201ENST00000492455 PARP4Q9UKK3 1724 aaKnown RBP-0.46□□□□□ -2.48
HMGB1P30-201ENST00000492455 ABCC6O95255 1503 aa-0.46□□□□□ -2.48
HMGB1P30-201ENST00000492455 CEP295Q9C0D2 2601 aa-0.46□□□□□ -2.48
HMGB1P30-201ENST00000492455 C5orf42Q9H799 3197 aa-0.46□□□□□ -2.48
HMGB1P30-201ENST00000492455 CENPEQ02224 2701 aa-0.46□□□□□ -2.48
HMGB1P30-201ENST00000492455 ADGRG4Q8IZF6 3080 aa-0.46□□□□□ -2.48
HMGB1P30-201ENST00000492455 TOGARAM1Q9Y4F4 1720 aa-0.47□□□□□ -2.48
HMGB1P30-201ENST00000492455 DNAH10Q8IVF4 4471 aa-0.47□□□□□ -2.48
HMGB1P30-201ENST00000492455 DCAF1Q9Y4B6 1507 aa-0.47□□□□□ -2.48
HMGB1P30-201ENST00000492455 SMCO4Q9NRQ5 59 aa-0.47□□□□□ -2.48
HMGB1P30-201ENST00000492455 KAAG1Q9UBP8 84 aa-0.47□□□□□ -2.48
HMGB1P30-201ENST00000492455 CFAP46Q8IYW2 2715 aa-0.47□□□□□ -2.49
HMGB1P30-201ENST00000492455 TJP1Q07157 1748 aa-0.47□□□□□ -2.49
HMGB1P30-201ENST00000492455 CDC42BPAQ5VT25 1732 aa-0.47□□□□□ -2.49
HMGB1P30-201ENST00000492455 RICTORQ6R327 1708 aa-0.47□□□□□ -2.49
HMGB1P30-201ENST00000492455 NRAPQ86VF7 1730 aa-0.47□□□□□ -2.49
HMGB1P30-201ENST00000492455 RNF17Q9BXT8 1623 aaKnown RBP-0.48□□□□□ -2.49
HMGB1P30-201ENST00000492455 ITSN2Q9NZM3 1697 aa-0.48□□□□□ -2.49
HMGB1P30-201ENST00000492455 HILPDAQ9Y5L2 63 aa-0.48□□□□□ -2.49
HMGB1P30-201ENST00000492455 ERVK-7P63135 1459 aa-0.48□□□□□ -2.49
HMGB1P30-201ENST00000492455 CD163L1Q9NR16 1453 aa-0.48□□□□□ -2.49
HMGB1P30-201ENST00000492455 INO80Q9ULG1 1556 aaPredicted RBP-0.49□□□□□ -2.49
HMGB1P30-201ENST00000492455 KIF1AQ12756 1690 aa-0.49□□□□□ -2.49
HMGB1P30-201ENST00000492455 BOD1L1Q8NFC6 3051 aa-0.49□□□□□ -2.49
HMGB1P30-201ENST00000492455 RB1CC1Q8TDY2 1594 aa-0.49□□□□□ -2.49
HMGB1P30-201ENST00000492455 NHSQ6T4R5 1651 aa-0.49□□□□□ -2.49
HMGB1P30-201ENST00000492455 LINC01549A6NIU2 74 aa-0.5□□□□□ -2.49
HMGB1P30-201ENST00000492455 WFDC10BQ8IUB3 73 aa-0.5□□□□□ -2.49
HMGB1P30-201ENST00000492455 LEAP2Q969E1 77 aa-0.5□□□□□ -2.49
HMGB1P30-201ENST00000492455 TTTY10Q9BZA0 68 aa-0.5□□□□□ -2.49
HMGB1P30-201ENST00000492455 MED14O60244 1454 aa-0.5□□□□□ -2.49
HMGB1P30-201ENST00000492455 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.5□□□□□ -2.49
HMGB1P30-201ENST00000492455 LRRIQ1Q96JM4 1722 aa-0.5□□□□□ -2.49
HMGB1P30-201ENST00000492455 H0YGX0 51 aa-0.51□□□□□ -2.49
HMGB1P30-201ENST00000492455 M0R1W7 72 aa-0.51□□□□□ -2.49
HMGB1P30-201ENST00000492455 LY75O60449 1722 aa-0.51□□□□□ -2.49
HMGB1P30-201ENST00000492455 SMARCA2P51531 1590 aa-0.51□□□□□ -2.49
HMGB1P30-201ENST00000492455 VPS13CQ709C8 3753 aa-0.51□□□□□ -2.49
HMGB1P30-201ENST00000492455 LINC00308Q8TCZ7 52 aa-0.51□□□□□ -2.49
HMGB1P30-201ENST00000492455 DUOX2Q9NRD8 1548 aa-0.51□□□□□ -2.49
HMGB1P30-201ENST00000492455 DMDP11532 3685 aa-0.51□□□□□ -2.49
HMGB1P30-201ENST00000492455 MUC3AQ02505 3323 aa-0.51□□□□□ -2.49
HMGB1P30-201ENST00000492455 ATMQ13315 3056 aa-0.51□□□□□ -2.49
HMGB1P30-201ENST00000492455 FREM2Q5SZK8 3169 aa-0.52□□□□□ -2.49
HMGB1P30-201ENST00000492455 CFAP74Q9C0B2 1584 aa-0.52□□□□□ -2.49
HMGB1P30-201ENST00000492455 EEA1Q15075 1411 aa-0.52□□□□□ -2.49
HMGB1P30-201ENST00000492455 SPEGQ15772 3267 aa-0.52□□□□□ -2.49
HMGB1P30-201ENST00000492455 MGAQ8IWI9 3026 aa-0.52□□□□□ -2.49
HMGB1P30-201ENST00000492455 MYO5CQ9NQX4 1742 aa-0.52□□□□□ -2.49
HMGB1P30-201ENST00000492455 CEP250Q9BV73 2442 aa-0.53□□□□□ -2.49
HMGB1P30-201ENST00000492455 WDFY4Q6ZS81 3184 aa-0.53□□□□□ -2.49
HMGB1P30-201ENST00000492455 MAST1Q9Y2H9 1570 aa-0.53□□□□□ -2.49
HMGB1P30-201ENST00000492455 CEP350Q5VT06 3117 aa-0.53□□□□□ -2.49
HMGB1P30-201ENST00000492455 PRUNE2Q8WUY3 3088 aa-0.53□□□□□ -2.49
HMGB1P30-201ENST00000492455 DEFB131AP59861 70 aa-0.53□□□□□ -2.49
HMGB1P30-201ENST00000492455 DEFB104AQ8WTQ1 72 aa-0.53□□□□□ -2.49
HMGB1P30-201ENST00000492455 MROH1Q8NDA8 1641 aa-0.53□□□□□ -2.49
HMGB1P30-201ENST00000492455 LOC400499M0QZD8 3231 aa-0.53□□□□□ -2.49
HMGB1P30-201ENST00000492455 EP400Q96L91 3159 aa-0.53□□□□□ -2.49
HMGB1P30-201ENST00000492455 SMIM5Q71RC9 77 aa-0.54□□□□□ -2.5
HMGB1P30-201ENST00000492455 MADDQ8WXG6 1647 aa-0.54□□□□□ -2.5
HMGB1P30-201ENST00000492455 SPTBN5Q9NRC6 3674 aaKnown RBP-0.54□□□□□ -2.5
HMGB1P30-201ENST00000492455 DCHS1Q96JQ0 3298 aa-0.55□□□□□ -2.5
HMGB1P30-201ENST00000492455 WDFY3Q8IZQ1 3526 aa-0.55□□□□□ -2.5
HMGB1P30-201ENST00000492455 C3P01024 1663 aa-0.55□□□□□ -2.5
HMGB1P30-201ENST00000492455 NRXN3Q9Y4C0 1643 aa-0.55□□□□□ -2.5
HMGB1P30-201ENST00000492455 DIP2AQ14689 1571 aa-0.55□□□□□ -2.5
HMGB1P30-201ENST00000492455 CLASP1Q7Z460 1538 aa-0.55□□□□□ -2.5
HMGB1P30-201ENST00000492455 CROCC2H7BZ55 1655 aa-0.56□□□□□ -2.5
HMGB1P30-201ENST00000492455 CRYBG3Q68DQ2 2970 aa-0.56□□□□□ -2.5
HMGB1P30-201ENST00000492455 GLI2P10070 1586 aa-0.56□□□□□ -2.5
HMGB1P30-201ENST00000492455 CFAP54Q96N23 3096 aa-0.56□□□□□ -2.5
HMGB1P30-201ENST00000492455 PREX2Q70Z35 1606 aa-0.56□□□□□ -2.5
HMGB1P30-201ENST00000492455 A0A1B0GUL6 1792 aa-0.57□□□□□ -2.5
HMGB1P30-201ENST00000492455 PCNTO95613 3336 aa-0.57□□□□□ -2.5
HMGB1P30-201ENST00000492455 PLNP26678 52 aa-0.57□□□□□ -2.5
HMGB1P30-201ENST00000492455 CD52P31358 61 aa-0.57□□□□□ -2.5
HMGB1P30-201ENST00000492455 USP34Q70CQ2 3546 aa-0.57□□□□□ -2.5
HMGB1P30-201ENST00000492455 KIF21BO75037 1637 aa-0.57□□□□□ -2.5
HMGB1P30-201ENST00000492455 SZT2Q5T011 3432 aa-0.57□□□□□ -2.5
HMGB1P30-201ENST00000492455 VCANP13611 3396 aa-0.57□□□□□ -2.5
HMGB1P30-201ENST00000492455 DEFB133Q30KQ1 61 aa-0.58□□□□□ -2.5
HMGB1P30-201ENST00000492455 TIAM1Q13009 1591 aa-0.58□□□□□ -2.5
HMGB1P30-201ENST00000492455 MKI67P46013 3256 aaKnown RBP-0.59□□□□□ -2.5
HMGB1P30-201ENST00000492455 POLR2KP53803 58 aaKnown RBP-0.59□□□□□ -2.5
HMGB1P30-201ENST00000492455 FRYLO94915 3013 aa-0.59□□□□□ -2.5
HMGB1P30-201ENST00000492455 UGGT2Q9NYU1 1516 aa-0.59□□□□□ -2.5
HMGB1P30-201ENST00000492455 UNC80Q8N2C7 3258 aa-0.6□□□□□ -2.5
HMGB1P30-201ENST00000492455 ABCA8O94911 1581 aa-0.6□□□□□ -2.51
HMGB1P30-201ENST00000492455 CFAP47Q6ZTR5 3102 aa-0.6□□□□□ -2.51
HMGB1P30-201ENST00000492455 A0A087WWC5 75 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms