RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 A0A1B0GU33 70 aa5.58□□□□□ -1.52
BRD9-209ENST00000490814 J3QL48 77 aa5.57□□□□□ -1.52
BRD9-209ENST00000490814 KRTAP4-5Q9BYR2 181 aa5.55□□□□□ -1.52
BRD9-209ENST00000490814 FAT2Q9NYQ8 4349 aa5.54□□□□□ -1.52
BRD9-209ENST00000490814 TPRXLQ17RH7 258 aa5.51□□□□□ -1.53
BRD9-209ENST00000490814 H1FX-AS1Q4G0G2 97 aa5.51□□□□□ -1.53
BRD9-209ENST00000490814 PKD1P98161 4303 aa5.49□□□□□ -1.53
BRD9-209ENST00000490814 APOBP04114 4563 aaKnown RBP5.49□□□□□ -1.53
BRD9-209ENST00000490814 KRTAP17-1Q9BYP8 105 aa5.49□□□□□ -1.53
BRD9-209ENST00000490814 VPS13BQ7Z7G8 4022 aa5.47□□□□□ -1.53
BRD9-209ENST00000490814 RYR1P21817 5038 aa5.46□□□□□ -1.54
BRD9-209ENST00000490814 C10orf95Q9H7T3 257 aa5.45□□□□□ -1.54
BRD9-209ENST00000490814 SEC61BP60468 96 aaKnown RBP5.44□□□□□ -1.54
BRD9-209ENST00000490814 BIRC6Q9NR09 4857 aa5.43□□□□□ -1.54
BRD9-209ENST00000490814 MYCBP2O75592 4640 aa5.42□□□□□ -1.54
BRD9-209ENST00000490814 A0A0D9SG42 100 aa5.41□□□□□ -1.54
BRD9-209ENST00000490814 COX6B2Q6YFQ2 88 aa5.39□□□□□ -1.55
BRD9-209ENST00000490814 KRTAP3-1Q9BYR8 98 aa5.39□□□□□ -1.55
BRD9-209ENST00000490814 LRP1Q07954 4544 aaKnown RBP5.38□□□□□ -1.55
BRD9-209ENST00000490814 HERC2O95714 4834 aa5.38□□□□□ -1.55
BRD9-209ENST00000490814 HSPG2P98160 4391 aa5.36□□□□□ -1.55
BRD9-209ENST00000490814 RPL37P61927 97 aaKnown RBP5.36□□□□□ -1.55
BRD9-209ENST00000490814 FAT3Q8TDW7 4589 aa5.35□□□□□ -1.55
BRD9-209ENST00000490814 ABCA13Q86UQ4 5058 aa5.35□□□□□ -1.55
BRD9-209ENST00000490814 RPS29P62273 56 aaKnown RBP5.34□□□□□ -1.55
BRD9-209ENST00000490814 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
BRD9-209ENST00000490814 KRTAP10-4P60372 401 aaPredicted RBP5.29□□□□□ -1.56
BRD9-209ENST00000490814 HERC1Q15751 4861 aa5.23□□□□□ -1.57
BRD9-209ENST00000490814 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
BRD9-209ENST00000490814 KRTAP10-6P60371 365 aaPredicted RBP5.18□□□□□ -1.58
BRD9-209ENST00000490814 S4R3F8 94 aa5.18□□□□□ -1.58
BRD9-209ENST00000490814 MT1HL1P0DM35 61 aa5.17□□□□□ -1.58
BRD9-209ENST00000490814 KRTAP10-8P60410 259 aa5.15□□□□□ -1.58
BRD9-209ENST00000490814 XP32Q5T750 250 aa5.11□□□□□ -1.59
BRD9-209ENST00000490814 KRTAP3-3Q9BYR6 98 aa5.11□□□□□ -1.59
BRD9-209ENST00000490814 KRTAP3-2Q9BYR7 98 aa5.1□□□□□ -1.59
BRD9-209ENST00000490814 KRTAP12-2P59991 146 aa5.09□□□□□ -1.59
BRD9-209ENST00000490814 PLAC4Q8WY50 150 aa5.09□□□□□ -1.59
BRD9-209ENST00000490814 LRP2P98164 4655 aa5.09□□□□□ -1.6
BRD9-209ENST00000490814 RNF213Q63HN8 5207 aa5.08□□□□□ -1.6
BRD9-209ENST00000490814 CAMK2N1Q7Z7J9 78 aa5.04□□□□□ -1.6
BRD9-209ENST00000490814 PKHD1L1Q86WI1 4243 aa5.03□□□□□ -1.6
BRD9-209ENST00000490814 UBR4Q5T4S7 5183 aa5.01□□□□□ -1.61
BRD9-209ENST00000490814 LPAP08519 4548 aa5.01□□□□□ -1.61
BRD9-209ENST00000490814 KRTAP12-1P59990 96 aa5□□□□□ -1.61
BRD9-209ENST00000490814 MUC2Q02817 5179 aa4.98□□□□□ -1.61
BRD9-209ENST00000490814 TNXBP22105 4242 aa4.92□□□□□ -1.62
BRD9-209ENST00000490814 M0QZ58 72 aa4.92□□□□□ -1.62
BRD9-209ENST00000490814 M0R2T5 61 aa4.91□□□□□ -1.62
BRD9-209ENST00000490814 R4GN34 69 aa4.89□□□□□ -1.63
BRD9-209ENST00000490814 FSIP2Q5CZC0 6907 aa4.88□□□□□ -1.63
BRD9-209ENST00000490814 HMCN2Q8NDA2 5059 aa4.85□□□□□ -1.63
BRD9-209ENST00000490814 PRO2289Q9P1D8 64 aa4.84□□□□□ -1.64
BRD9-209ENST00000490814 FAT4Q6V0I7 4981 aa4.77□□□□□ -1.65
BRD9-209ENST00000490814 LORP23490 312 aaPredicted RBP4.73□□□□□ -1.65
BRD9-209ENST00000490814 KRTAP4-1Q9BYQ7 146 aa4.7□□□□□ -1.66
BRD9-209ENST00000490814 PP632Q6XCG6 107 aa4.67□□□□□ -1.66
BRD9-209ENST00000490814 INE1O15225 51 aa4.59□□□□□ -1.67
BRD9-209ENST00000490814 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
BRD9-209ENST00000490814 MUC17Q685J3 4493 aa4.47□□□□□ -1.69
BRD9-209ENST00000490814 TNP1P09430 55 aa4.47□□□□□ -1.69
BRD9-209ENST00000490814 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
BRD9-209ENST00000490814 MT1HP80294 61 aa4.39□□□□□ -1.71
BRD9-209ENST00000490814 KRTAP19-2Q3LHN2 52 aa4.38□□□□□ -1.71
BRD9-209ENST00000490814 LCE2CQ5TA81 110 aa4.37□□□□□ -1.71
BRD9-209ENST00000490814 USH2AO75445 5202 aa4.36□□□□□ -1.71
BRD9-209ENST00000490814 LCE2DQ5TA82 110 aaPredicted RBP4.3□□□□□ -1.72
BRD9-209ENST00000490814 KRTAP23-1A1A580 65 aa4.27□□□□□ -1.73
BRD9-209ENST00000490814 FLGP20930 4061 aaPredicted RBP4.27□□□□□ -1.73
BRD9-209ENST00000490814 LCE2AQ5TA79 106 aaPredicted RBP4.24□□□□□ -1.73
BRD9-209ENST00000490814 MT2AP02795 61 aa4.18□□□□□ -1.74
BRD9-209ENST00000490814 MT1FP04733 61 aa4.18□□□□□ -1.74
BRD9-209ENST00000490814 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
BRD9-209ENST00000490814 KRTAP19-1Q8IUB9 90 aa4.15□□□□□ -1.74
BRD9-209ENST00000490814 KRTAP9-8Q9BYQ0 159 aa4.14□□□□□ -1.75
BRD9-209ENST00000490814 SPRR2GQ9BYE4 73 aa4.13□□□□□ -1.75
BRD9-209ENST00000490814 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.76
BRD9-209ENST00000490814 LCE2BO14633 110 aa4□□□□□ -1.77
BRD9-209ENST00000490814 KRTAP9-3Q9BYQ3 159 aa3.98□□□□□ -1.77
BRD9-209ENST00000490814 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
BRD9-209ENST00000490814 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
BRD9-209ENST00000490814 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
BRD9-209ENST00000490814 SSPOA2VEC9 5147 aa3.94□□□□□ -1.78
BRD9-209ENST00000490814 KMT2DO14686 5537 aa3.93□□□□□ -1.78
BRD9-209ENST00000490814 KRTAP10-5P60370 271 aa3.93□□□□□ -1.78
BRD9-209ENST00000490814 MT1XP80297 61 aa3.93□□□□□ -1.78
BRD9-209ENST00000490814 MT1BP07438 61 aa3.92□□□□□ -1.78
BRD9-209ENST00000490814 CRCT1Q9UGL9 99 aa3.9□□□□□ -1.78
BRD9-209ENST00000490814 KRTAP10-7P60409 375 aaPredicted RBP3.9□□□□□ -1.79
BRD9-209ENST00000490814 KRTAP19-8Q3LI54 63 aa3.9□□□□□ -1.79
BRD9-209ENST00000490814 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
BRD9-209ENST00000490814 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
BRD9-209ENST00000490814 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
BRD9-209ENST00000490814 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
BRD9-209ENST00000490814 FCGBPQ9Y6R7 5405 aaPredicted RBP3.82□□□□□ -1.8
BRD9-209ENST00000490814 MACF1Q9UPN3 7388 aaKnown RBP3.79□□□□□ -1.8
BRD9-209ENST00000490814 KRTAP19-5Q3LI72 72 aa3.77□□□□□ -1.81
BRD9-209ENST00000490814 KRTAP4-8A0A0G2JLE6 195 aa3.7□□□□□ -1.82
BRD9-209ENST00000490814 KRTAP4-8Q9BYQ9 185 aa3.7□□□□□ -1.82
BRD9-209ENST00000490814 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms