RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 M0R1W7 72 aa-0.27□□□□□ -2.45
CD46-215ENST00000488596 CELSR3Q9NYQ7 3312 aa-0.27□□□□□ -2.45
CD46-215ENST00000488596 ABCA10Q8WWZ4 1543 aa-0.28□□□□□ -2.45
CD46-215ENST00000488596 A0A087WWC5 75 aa-0.28□□□□□ -2.45
CD46-215ENST00000488596 NOP10Q9NPE3 64 aaKnown RBP-0.28□□□□□ -2.45
CD46-215ENST00000488596 NIPBLQ6KC79 2804 aaeCLIP-0.28□□□□□ -2.45
CD46-215ENST00000488596 FAM208AQ9UK61 1670 aaKnown RBP-0.29□□□□□ -2.46
CD46-215ENST00000488596 MMP24-AS1A0A0U1RRL7 71 aa-0.29□□□□□ -2.46
CD46-215ENST00000488596 SERF2P84101 59 aa-0.29□□□□□ -2.46
CD46-215ENST00000488596 KRTAP20-2Q3LI61 65 aa-0.29□□□□□ -2.46
CD46-215ENST00000488596 UGGT1Q9NYU2 1555 aa-0.29□□□□□ -2.46
CD46-215ENST00000488596 LRBAP50851 2863 aa-0.29□□□□□ -2.46
CD46-215ENST00000488596 ADGRG4Q8IZF6 3080 aa-0.29□□□□□ -2.46
CD46-215ENST00000488596 EEA1Q15075 1411 aa-0.3□□□□□ -2.46
CD46-215ENST00000488596 TNP1P09430 55 aa-0.3□□□□□ -2.46
CD46-215ENST00000488596 MT4P47944 62 aa-0.3□□□□□ -2.46
CD46-215ENST00000488596 COL6A5A8TX70 2615 aa-0.3□□□□□ -2.46
CD46-215ENST00000488596 MYO9AB2RTY4 2548 aa-0.3□□□□□ -2.46
CD46-215ENST00000488596 DNAH5Q8TE73 4624 aa-0.3□□□□□ -2.46
CD46-215ENST00000488596 MGAQ8IWI9 3026 aa-0.3□□□□□ -2.46
CD46-215ENST00000488596 CHD7Q9P2D1 2997 aa-0.3□□□□□ -2.46
CD46-215ENST00000488596 SRCAPQ6ZRS2 3230 aa-0.31□□□□□ -2.46
CD46-215ENST00000488596 KIAA1109Q2LD37 5005 aa-0.31□□□□□ -2.46
CD46-215ENST00000488596 NMES1Q9C002 83 aa-0.31□□□□□ -2.46
CD46-215ENST00000488596 MAST1Q9Y2H9 1570 aa-0.32□□□□□ -2.46
CD46-215ENST00000488596 CPS1P31327 1500 aa-0.32□□□□□ -2.46
CD46-215ENST00000488596 EFCAB6Q5THR3 1501 aa-0.32□□□□□ -2.46
CD46-215ENST00000488596 LAMA3Q16787 3333 aa-0.32□□□□□ -2.46
CD46-215ENST00000488596 S100ZQ8WXG8 99 aa-0.32□□□□□ -2.46
CD46-215ENST00000488596 TMEM167BQ9NRX6 74 aa-0.32□□□□□ -2.46
CD46-215ENST00000488596 ABRACLQ9P1F3 81 aa-0.32□□□□□ -2.46
CD46-215ENST00000488596 LAMA2P24043 3122 aaKnown RBP-0.33□□□□□ -2.46
CD46-215ENST00000488596 MROH2AA6NES4 1674 aa-0.33□□□□□ -2.46
CD46-215ENST00000488596 LMO7Q8WWI1 1683 aa-0.33□□□□□ -2.46
CD46-215ENST00000488596 PRXQ9BXM0 1461 aa-0.33□□□□□ -2.46
CD46-215ENST00000488596 PREX2Q70Z35 1606 aa-0.33□□□□□ -2.46
CD46-215ENST00000488596 IGIPA6NJ69 53 aa-0.33□□□□□ -2.46
CD46-215ENST00000488596 M0QY20 66 aa-0.33□□□□□ -2.46
CD46-215ENST00000488596 KRTAP19-5Q3LI72 72 aa-0.33□□□□□ -2.46
CD46-215ENST00000488596 KIF21BO75037 1637 aa-0.34□□□□□ -2.46
CD46-215ENST00000488596 DEFB1P60022 68 aa-0.34□□□□□ -2.46
CD46-215ENST00000488596 CLPSL2Q6UWE3 100 aa-0.34□□□□□ -2.46
CD46-215ENST00000488596 SMIM5Q71RC9 77 aa-0.34□□□□□ -2.46
CD46-215ENST00000488596 LINC00308Q8TCZ7 52 aa-0.34□□□□□ -2.46
CD46-215ENST00000488596 CSMD1Q96PZ7 3565 aa-0.35□□□□□ -2.46
CD46-215ENST00000488596 CEP295Q9C0D2 2601 aa-0.35□□□□□ -2.47
CD46-215ENST00000488596 SMIM31A0A1B0GVY4 71 aa-0.35□□□□□ -2.47
CD46-215ENST00000488596 KAAG1Q9UBP8 84 aa-0.35□□□□□ -2.47
CD46-215ENST00000488596 ERICH3Q5RHP9 1530 aa-0.35□□□□□ -2.47
CD46-215ENST00000488596 SYCP2Q9BX26 1530 aa-0.35□□□□□ -2.47
CD46-215ENST00000488596 ABCA5Q8WWZ7 1642 aa-0.35□□□□□ -2.47
CD46-215ENST00000488596 CFAP46Q8IYW2 2715 aa-0.36□□□□□ -2.47
CD46-215ENST00000488596 MT1HP80294 61 aa-0.36□□□□□ -2.47
CD46-215ENST00000488596 NRXN3Q9Y4C0 1643 aa-0.37□□□□□ -2.47
CD46-215ENST00000488596 SMIM27A0A1W2PRY6 76 aa-0.37□□□□□ -2.47
CD46-215ENST00000488596 KRTAP8-1Q8IUC2 63 aa-0.37□□□□□ -2.47
CD46-215ENST00000488596 AGLP35573 1532 aa-0.38□□□□□ -2.47
CD46-215ENST00000488596 A8MTW9 85 aa-0.38□□□□□ -2.47
CD46-215ENST00000488596 H0YGX0 51 aa-0.38□□□□□ -2.47
CD46-215ENST00000488596 M0QZ58 72 aa-0.38□□□□□ -2.47
CD46-215ENST00000488596 SMR3BP02814 79 aaPredicted RBP-0.38□□□□□ -2.47
CD46-215ENST00000488596 WFDC10BQ8IUB3 73 aa-0.38□□□□□ -2.47
CD46-215ENST00000488596 CRYBG3Q68DQ2 2970 aa-0.38□□□□□ -2.47
CD46-215ENST00000488596 DDX60Q8IY21 1712 aaKnown RBP-0.38□□□□□ -2.47
CD46-215ENST00000488596 ADCY10Q96PN6 1610 aa-0.38□□□□□ -2.47
CD46-215ENST00000488596 ABCA13Q86UQ4 5058 aa-0.39□□□□□ -2.47
CD46-215ENST00000488596 IQGAP1P46940 1657 aa-0.4□□□□□ -2.47
CD46-215ENST00000488596 EYSQ5T1H1 3165 aa-0.4□□□□□ -2.47
CD46-215ENST00000488596 ZFHX4Q86UP3 3567 aa-0.4□□□□□ -2.47
CD46-215ENST00000488596 ABCC8Q09428 1581 aa-0.4□□□□□ -2.47
CD46-215ENST00000488596 SMG1Q96Q15 3661 aaKnown RBP-0.41□□□□□ -2.47
CD46-215ENST00000488596 PLNP26678 52 aa-0.41□□□□□ -2.48
CD46-215ENST00000488596 DMXL2Q8TDJ6 3036 aa-0.41□□□□□ -2.48
CD46-215ENST00000488596 LINC01546A6NGU7 62 aa-0.42□□□□□ -2.48
CD46-215ENST00000488596 VPS13CQ709C8 3753 aa-0.43□□□□□ -2.48
CD46-215ENST00000488596 CSMD2Q7Z408 3487 aa-0.43□□□□□ -2.48
CD46-215ENST00000488596 TLN1Q9Y490 2541 aaKnown RBP-0.43□□□□□ -2.48
CD46-215ENST00000488596 ITPR2Q14571 2701 aa-0.44□□□□□ -2.48
CD46-215ENST00000488596 PRUNE2Q8WUY3 3088 aa-0.44□□□□□ -2.48
CD46-215ENST00000488596 DEFB131AP59861 70 aa-0.44□□□□□ -2.48
CD46-215ENST00000488596 FANCD2Q9BXW9 1451 aa-0.44□□□□□ -2.48
CD46-215ENST00000488596 CLTCL1P53675 1640 aa-0.45□□□□□ -2.48
CD46-215ENST00000488596 SPART-AS1P0CW21 52 aa-0.45□□□□□ -2.48
CD46-215ENST00000488596 MT1XP80297 61 aa-0.45□□□□□ -2.48
CD46-215ENST00000488596 TFF3Q07654 80 aa-0.45□□□□□ -2.48
CD46-215ENST00000488596 KRTAP20-1Q3LI63 56 aa-0.45□□□□□ -2.48
CD46-215ENST00000488596 CFAP54Q96N23 3096 aa-0.46□□□□□ -2.48
CD46-215ENST00000488596 NFAT5O94916 1531 aa-0.46□□□□□ -2.48
CD46-215ENST00000488596 MT1EP04732 61 aa-0.46□□□□□ -2.48
CD46-215ENST00000488596 POLR2KP53803 58 aaKnown RBP-0.47□□□□□ -2.48
CD46-215ENST00000488596 CMC2Q9NRP2 79 aa-0.47□□□□□ -2.48
CD46-215ENST00000488596 FRYLO94915 3013 aa-0.47□□□□□ -2.49
CD46-215ENST00000488596 SMIM2Q9BVW6 85 aa-0.48□□□□□ -2.49
CD46-215ENST00000488596 ATMQ13315 3056 aa-0.48□□□□□ -2.49
CD46-215ENST00000488596 TRPM2O94759 1503 aa-0.48□□□□□ -2.49
CD46-215ENST00000488596 MT1LQ93083 61 aa-0.49□□□□□ -2.49
CD46-215ENST00000488596 FREM2Q5SZK8 3169 aa-0.51□□□□□ -2.49
CD46-215ENST00000488596 CEP250Q9BV73 2442 aa-0.51□□□□□ -2.49
CD46-215ENST00000488596 LEAP2Q969E1 77 aa-0.53□□□□□ -2.49
CD46-215ENST00000488596 MT1HL1P0DM35 61 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms