RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 CCDC18Q5T9S5 1454 aa-0.85□□□□□ -2.55
R3HDM1-219ENST00000488035 SRCAPQ6ZRS2 3230 aa-0.85□□□□□ -2.55
R3HDM1-219ENST00000488035 LINC00308Q8TCZ7 52 aa-0.85□□□□□ -2.55
R3HDM1-219ENST00000488035 CFAP46Q8IYW2 2715 aa-0.85□□□□□ -2.55
R3HDM1-219ENST00000488035 RELNP78509 3460 aa-0.85□□□□□ -2.55
R3HDM1-219ENST00000488035 RNF17Q9BXT8 1623 aaKnown RBP-0.86□□□□□ -2.55
R3HDM1-219ENST00000488035 DNAH8Q96JB1 4490 aa-0.86□□□□□ -2.55
R3HDM1-219ENST00000488035 PPLO60437 1756 aa-0.86□□□□□ -2.55
R3HDM1-219ENST00000488035 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.87□□□□□ -2.55
R3HDM1-219ENST00000488035 K7EMI3 77 aa-0.87□□□□□ -2.55
R3HDM1-219ENST00000488035 DYNC1H1Q14204 4646 aaKnown RBP-0.87□□□□□ -2.55
R3HDM1-219ENST00000488035 EYSQ5T1H1 3165 aa-0.87□□□□□ -2.55
R3HDM1-219ENST00000488035 ADGRG4Q8IZF6 3080 aa-0.87□□□□□ -2.55
R3HDM1-219ENST00000488035 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.88□□□□□ -2.55
R3HDM1-219ENST00000488035 MYO5CQ9NQX4 1742 aa-0.88□□□□□ -2.55
R3HDM1-219ENST00000488035 TMEM167BQ9NRX6 74 aa-0.88□□□□□ -2.55
R3HDM1-219ENST00000488035 LEAP2Q969E1 77 aa-0.89□□□□□ -2.55
R3HDM1-219ENST00000488035 NMES1Q9C002 83 aa-0.89□□□□□ -2.55
R3HDM1-219ENST00000488035 GLI2P10070 1586 aa-0.89□□□□□ -2.55
R3HDM1-219ENST00000488035 SMARCA2P51531 1590 aa-0.89□□□□□ -2.55
R3HDM1-219ENST00000488035 CLASP1Q7Z460 1538 aa-0.89□□□□□ -2.55
R3HDM1-219ENST00000488035 EEA1Q15075 1411 aa-0.89□□□□□ -2.55
R3HDM1-219ENST00000488035 CMYA5Q8N3K9 4069 aa-0.89□□□□□ -2.55
R3HDM1-219ENST00000488035 A0A1B0GUL6 1792 aa-0.9□□□□□ -2.55
R3HDM1-219ENST00000488035 MT1BP07438 61 aa-0.9□□□□□ -2.55
R3HDM1-219ENST00000488035 POLR2KP53803 58 aaKnown RBP-0.9□□□□□ -2.55
R3HDM1-219ENST00000488035 SMCO4Q9NRQ5 59 aa-0.9□□□□□ -2.55
R3HDM1-219ENST00000488035 CSMD1Q96PZ7 3565 aa-0.91□□□□□ -2.55
R3HDM1-219ENST00000488035 MGAQ8IWI9 3026 aa-0.91□□□□□ -2.55
R3HDM1-219ENST00000488035 CFAP74Q9C0B2 1584 aa-0.91□□□□□ -2.55
R3HDM1-219ENST00000488035 NHSQ6T4R5 1651 aa-0.91□□□□□ -2.56
R3HDM1-219ENST00000488035 DUOX2Q9NRD8 1548 aa-0.92□□□□□ -2.56
R3HDM1-219ENST00000488035 PDCD5O14737 125 aa-0.92□□□□□ -2.56
R3HDM1-219ENST00000488035 SERF2P84101 59 aa-0.92□□□□□ -2.56
R3HDM1-219ENST00000488035 TIAM1Q13009 1591 aa-0.92□□□□□ -2.56
R3HDM1-219ENST00000488035 MROH1Q8NDA8 1641 aa-0.93□□□□□ -2.56
R3HDM1-219ENST00000488035 EFCAB6Q5THR3 1501 aa-0.93□□□□□ -2.56
R3HDM1-219ENST00000488035 C3P01024 1663 aa-0.93□□□□□ -2.56
R3HDM1-219ENST00000488035 DEFB136Q30KP8 78 aa-0.93□□□□□ -2.56
R3HDM1-219ENST00000488035 ITPR2Q14571 2701 aa-0.93□□□□□ -2.56
R3HDM1-219ENST00000488035 TLN1Q9Y490 2541 aaKnown RBP-0.93□□□□□ -2.56
R3HDM1-219ENST00000488035 ABCA8O94911 1581 aa-0.94□□□□□ -2.56
R3HDM1-219ENST00000488035 PREX2Q70Z35 1606 aa-0.94□□□□□ -2.56
R3HDM1-219ENST00000488035 DNAH17Q9UFH2 4485 aa-0.95□□□□□ -2.56
R3HDM1-219ENST00000488035 TRRAPQ9Y4A5 3859 aa-0.95□□□□□ -2.56
R3HDM1-219ENST00000488035 IGIPA6NJ69 53 aa-0.95□□□□□ -2.56
R3HDM1-219ENST00000488035 TFF3Q07654 80 aa-0.95□□□□□ -2.56
R3HDM1-219ENST00000488035 UGGT2Q9NYU1 1516 aa-0.95□□□□□ -2.56
R3HDM1-219ENST00000488035 DNAH7Q8WXX0 4024 aa-0.95□□□□□ -2.56
R3HDM1-219ENST00000488035 SPTBN5Q9NRC6 3674 aaKnown RBP-0.95□□□□□ -2.56
R3HDM1-219ENST00000488035 RB1CC1Q8TDY2 1594 aa-0.96□□□□□ -2.56
R3HDM1-219ENST00000488035 ABCA9Q8IUA7 1624 aa-0.96□□□□□ -2.56
R3HDM1-219ENST00000488035 CROCC2H7BZ55 1655 aa-0.96□□□□□ -2.56
R3HDM1-219ENST00000488035 S100ZQ8WXG8 99 aa-0.96□□□□□ -2.56
R3HDM1-219ENST00000488035 DMXL2Q8TDJ6 3036 aa-0.96□□□□□ -2.56
R3HDM1-219ENST00000488035 MADDQ8WXG6 1647 aa-0.97□□□□□ -2.56
R3HDM1-219ENST00000488035 FAM208AQ9UK61 1670 aaKnown RBP-0.97□□□□□ -2.56
R3HDM1-219ENST00000488035 H0YGX0 51 aa-0.97□□□□□ -2.56
R3HDM1-219ENST00000488035 RPS29P62273 56 aaKnown RBP-0.97□□□□□ -2.56
R3HDM1-219ENST00000488035 IQGAP3Q86VI3 1631 aa-0.97□□□□□ -2.57
R3HDM1-219ENST00000488035 SPENQ96T58 3664 aaKnown RBP-0.98□□□□□ -2.57
R3HDM1-219ENST00000488035 DEFB131AP59861 70 aa-0.98□□□□□ -2.57
R3HDM1-219ENST00000488035 ATMQ13315 3056 aa-1□□□□□ -2.57
R3HDM1-219ENST00000488035 KIF21BO75037 1637 aa-1□□□□□ -2.57
R3HDM1-219ENST00000488035 KRTAP20-1Q3LI63 56 aa-1.01□□□□□ -2.57
R3HDM1-219ENST00000488035 CPS1P31327 1500 aa-1.01□□□□□ -2.57
R3HDM1-219ENST00000488035 PLNP26678 52 aa-1.02□□□□□ -2.57
R3HDM1-219ENST00000488035 ALS2Q96Q42 1657 aa-1.02□□□□□ -2.57
R3HDM1-219ENST00000488035 ABCA6Q8N139 1617 aa-1.03□□□□□ -2.57
R3HDM1-219ENST00000488035 UGGT1Q9NYU2 1555 aa-1.03□□□□□ -2.57
R3HDM1-219ENST00000488035 DNAH10Q8IVF4 4471 aa-1.04□□□□□ -2.58
R3HDM1-219ENST00000488035 SMIM2Q9BVW6 85 aa-1.04□□□□□ -2.58
R3HDM1-219ENST00000488035 SMG1Q96Q15 3661 aaKnown RBP-1.04□□□□□ -2.58
R3HDM1-219ENST00000488035 DNAH5Q8TE73 4624 aa-1.04□□□□□ -2.58
R3HDM1-219ENST00000488035 A0A087WWC5 75 aa-1.05□□□□□ -2.58
R3HDM1-219ENST00000488035 MT1FP04733 61 aa-1.06□□□□□ -2.58
R3HDM1-219ENST00000488035 SMIM5Q71RC9 77 aa-1.06□□□□□ -2.58
R3HDM1-219ENST00000488035 CSMD2Q7Z408 3487 aa-1.06□□□□□ -2.58
R3HDM1-219ENST00000488035 SYCP2Q9BX26 1530 aa-1.06□□□□□ -2.58
R3HDM1-219ENST00000488035 EFCAB5A4FU69 1503 aa-1.07□□□□□ -2.58
R3HDM1-219ENST00000488035 CFAP54Q96N23 3096 aa-1.08□□□□□ -2.58
R3HDM1-219ENST00000488035 CRYBG3Q68DQ2 2970 aa-1.09□□□□□ -2.58
R3HDM1-219ENST00000488035 AGLP35573 1532 aa-1.1□□□□□ -2.58
R3HDM1-219ENST00000488035 LMO7Q8WWI1 1683 aa-1.1□□□□□ -2.58
R3HDM1-219ENST00000488035 ZFHX4Q86UP3 3567 aa-1.1□□□□□ -2.59
R3HDM1-219ENST00000488035 PRUNE2Q8WUY3 3088 aa-1.1□□□□□ -2.59
R3HDM1-219ENST00000488035 SCRIBQ14160 1630 aa-1.11□□□□□ -2.59
R3HDM1-219ENST00000488035 TTTY10Q9BZA0 68 aa-1.11□□□□□ -2.59
R3HDM1-219ENST00000488035 BOD1L1Q8NFC6 3051 aa-1.11□□□□□ -2.59
R3HDM1-219ENST00000488035 TOMM7Q9P0U1 55 aa-1.12□□□□□ -2.59
R3HDM1-219ENST00000488035 MYO15AQ9UKN7 3530 aa-1.13□□□□□ -2.59
R3HDM1-219ENST00000488035 ABCA10Q8WWZ4 1543 aa-1.13□□□□□ -2.59
R3HDM1-219ENST00000488035 KRTAP19-6Q3LI70 58 aa-1.13□□□□□ -2.59
R3HDM1-219ENST00000488035 FREM2Q5SZK8 3169 aa-1.13□□□□□ -2.59
R3HDM1-219ENST00000488035 PRXQ9BXM0 1461 aa-1.14□□□□□ -2.59
R3HDM1-219ENST00000488035 CCDC180Q9P1Z9 1646 aa-1.15□□□□□ -2.59
R3HDM1-219ENST00000488035 MROH2AA6NES4 1674 aa-1.16□□□□□ -2.59
R3HDM1-219ENST00000488035 NDUFA1O15239 70 aa-1.16□□□□□ -2.6
R3HDM1-219ENST00000488035 CEP250Q9BV73 2442 aa-1.17□□□□□ -2.6
R3HDM1-219ENST00000488035 A0A096LNI7 61 aa-1.17□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms