RNA–Protein interactions for RNA: ENST00000487159.5

TRAK1-209, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-209ENST00000487159 KRTAP10-4P60372 401 aaPredicted RBP7.16□□□□□ -1.26
TRAK1-209ENST00000487159 ZNF469Q96JG9 3925 aaPredicted RBP7.13□□□□□ -1.27
TRAK1-209ENST00000487159 HUWE1Q7Z6Z7 4374 aaKnown RBP7.04□□□□□ -1.28
TRAK1-209ENST00000487159 KRTAP8-1Q8IUC2 63 aa6.95□□□□□ -1.3
TRAK1-209ENST00000487159 ALMS1Q8TCU4 4167 aa6.87□□□□□ -1.31
TRAK1-209ENST00000487159 AKAP9Q99996 3911 aa6.83□□□□□ -1.32
TRAK1-209ENST00000487159 LCE3CQ5T5A8 94 aa6.73□□□□□ -1.33
TRAK1-209ENST00000487159 DNAH9Q9NYC9 4486 aa6.72□□□□□ -1.33
TRAK1-209ENST00000487159 DNAH5Q8TE73 4624 aa6.72□□□□□ -1.33
TRAK1-209ENST00000487159 DNHD1Q96M86 4753 aa6.67□□□□□ -1.34
TRAK1-209ENST00000487159 MT1HP80294 61 aa6.66□□□□□ -1.34
TRAK1-209ENST00000487159 PLECQ15149 4684 aaKnown RBP6.66□□□□□ -1.34
TRAK1-209ENST00000487159 DNAH11Q96DT5 4516 aa6.63□□□□□ -1.35
TRAK1-209ENST00000487159 KRTAP19-5Q3LI72 72 aa6.62□□□□□ -1.35
TRAK1-209ENST00000487159 KRTAP4-1Q9BYQ7 146 aa6.61□□□□□ -1.35
TRAK1-209ENST00000487159 DNAH10Q8IVF4 4471 aa6.61□□□□□ -1.35
TRAK1-209ENST00000487159 DNAH1Q9P2D7 4330 aa6.6□□□□□ -1.35
TRAK1-209ENST00000487159 SPRR2GQ9BYE4 73 aa6.54□□□□□ -1.36
TRAK1-209ENST00000487159 KRTAP10-7P60409 375 aaPredicted RBP6.54□□□□□ -1.36
TRAK1-209ENST00000487159 SPRR2FQ96RM1 72 aa6.52□□□□□ -1.37
TRAK1-209ENST00000487159 KRTAP12-4P60329 112 aa6.51□□□□□ -1.37
TRAK1-209ENST00000487159 MT2AP02795 61 aa6.51□□□□□ -1.37
TRAK1-209ENST00000487159 KRTAP19-4Q3LI73 84 aa6.5□□□□□ -1.37
TRAK1-209ENST00000487159 FAT1Q14517 4588 aa6.45□□□□□ -1.38
TRAK1-209ENST00000487159 RYR1P21817 5038 aa6.42□□□□□ -1.38
TRAK1-209ENST00000487159 STARD9Q9P2P6 4700 aa6.4□□□□□ -1.38
TRAK1-209ENST00000487159 VPS13DQ5THJ4 4388 aa6.38□□□□□ -1.39
TRAK1-209ENST00000487159 DNAH17Q9UFH2 4485 aa6.37□□□□□ -1.39
TRAK1-209ENST00000487159 MT1FP04733 61 aa6.36□□□□□ -1.39
TRAK1-209ENST00000487159 DYNC1H1Q14204 4646 aaKnown RBP6.35□□□□□ -1.39
TRAK1-209ENST00000487159 DNAH8Q96JB1 4490 aa6.34□□□□□ -1.4
TRAK1-209ENST00000487159 LRP1BQ9NZR2 4599 aa6.31□□□□□ -1.4
TRAK1-209ENST00000487159 LCE3BQ5TA77 95 aa6.31□□□□□ -1.4
TRAK1-209ENST00000487159 SPRR5A0A1B0GTR4 108 aa6.28□□□□□ -1.4
TRAK1-209ENST00000487159 DNAH2Q9P225 4427 aa6.28□□□□□ -1.4
TRAK1-209ENST00000487159 PRKDCP78527 4128 aaKnown RBP6.26□□□□□ -1.41
TRAK1-209ENST00000487159 KMT2AQ03164 3969 aa6.2□□□□□ -1.42
TRAK1-209ENST00000487159 SPRR2EP22531 72 aa6.18□□□□□ -1.42
TRAK1-209ENST00000487159 SPRR2BP35325 72 aa6.18□□□□□ -1.42
TRAK1-209ENST00000487159 SPRR2AP35326 72 aa6.18□□□□□ -1.42
TRAK1-209ENST00000487159 MYCBP2O75592 4640 aa6.17□□□□□ -1.42
TRAK1-209ENST00000487159 LYSTQ99698 3801 aa6.17□□□□□ -1.42
TRAK1-209ENST00000487159 ANK2Q01484 3957 aa6.17□□□□□ -1.42
TRAK1-209ENST00000487159 SACSQ9NZJ4 4579 aa6.17□□□□□ -1.42
TRAK1-209ENST00000487159 FRAS1Q86XX4 4008 aa6.13□□□□□ -1.43
TRAK1-209ENST00000487159 LCE3DQ9BYE3 92 aa6.11□□□□□ -1.43
TRAK1-209ENST00000487159 FAT2Q9NYQ8 4349 aa6.11□□□□□ -1.43
TRAK1-209ENST00000487159 DNAH3Q8TD57 4116 aa6.08□□□□□ -1.44
TRAK1-209ENST00000487159 KIAA1109Q2LD37 5005 aa6.07□□□□□ -1.44
TRAK1-209ENST00000487159 RYR3Q15413 4870 aa6.07□□□□□ -1.44
TRAK1-209ENST00000487159 VPS13BQ7Z7G8 4022 aa6.07□□□□□ -1.44
TRAK1-209ENST00000487159 LCE3EQ5T5B0 92 aa6.06□□□□□ -1.44
TRAK1-209ENST00000487159 DYNC2H1Q8NCM8 4307 aaKnown RBP6.06□□□□□ -1.44
TRAK1-209ENST00000487159 APOBP04114 4563 aaKnown RBP6.06□□□□□ -1.44
TRAK1-209ENST00000487159 MT1GP13640 62 aa6.05□□□□□ -1.44
TRAK1-209ENST00000487159 KRTAP17-1Q9BYP8 105 aa5.98□□□□□ -1.45
TRAK1-209ENST00000487159 SPRR2DP22532 72 aa5.98□□□□□ -1.45
TRAK1-209ENST00000487159 FAT3Q8TDW7 4589 aa5.96□□□□□ -1.46
TRAK1-209ENST00000487159 LRP1Q07954 4544 aaKnown RBP5.96□□□□□ -1.46
TRAK1-209ENST00000487159 KRTAP19-8Q3LI54 63 aa5.93□□□□□ -1.46
TRAK1-209ENST00000487159 DNAH6Q9C0G6 4158 aa5.91□□□□□ -1.46
TRAK1-209ENST00000487159 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.46
TRAK1-209ENST00000487159 CMYA5Q8N3K9 4069 aa5.9□□□□□ -1.47
TRAK1-209ENST00000487159 MT1XP80297 61 aa5.87□□□□□ -1.47
TRAK1-209ENST00000487159 LCE2BO14633 110 aa5.86□□□□□ -1.47
TRAK1-209ENST00000487159 DNAH7Q8WXX0 4024 aa5.82□□□□□ -1.48
TRAK1-209ENST00000487159 HECTD4Q9Y4D8 3996 aa5.78□□□□□ -1.48
TRAK1-209ENST00000487159 BIRC6Q9NR09 4857 aa5.77□□□□□ -1.49
TRAK1-209ENST00000487159 PRM1P04553 51 aa5.76□□□□□ -1.49
TRAK1-209ENST00000487159 HYDINQ4G0P3 5121 aa5.75□□□□□ -1.49
TRAK1-209ENST00000487159 HERC2O95714 4834 aa5.74□□□□□ -1.49
TRAK1-209ENST00000487159 PCLOQ9Y6V0 5065 aa5.71□□□□□ -1.5
TRAK1-209ENST00000487159 LRP2P98164 4655 aa5.71□□□□□ -1.5
TRAK1-209ENST00000487159 RYR2Q92736 4967 aa5.69□□□□□ -1.5
TRAK1-209ENST00000487159 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
TRAK1-209ENST00000487159 KRTAP4-8A0A0G2JLE6 195 aa5.66□□□□□ -1.5
TRAK1-209ENST00000487159 KRTAP4-8Q9BYQ9 185 aa5.66□□□□□ -1.5
TRAK1-209ENST00000487159 MT1BP07438 61 aa5.66□□□□□ -1.5
TRAK1-209ENST00000487159 PKHD1P08F94 4074 aa5.64□□□□□ -1.51
TRAK1-209ENST00000487159 HERC1Q15751 4861 aa5.59□□□□□ -1.51
TRAK1-209ENST00000487159 KRTAP9-3Q9BYQ3 159 aa5.58□□□□□ -1.52
TRAK1-209ENST00000487159 EPPK1P58107 5090 aaKnown RBP5.55□□□□□ -1.52
TRAK1-209ENST00000487159 KRTAP9-2Q9BYQ4 174 aa5.55□□□□□ -1.52
TRAK1-209ENST00000487159 MT1LQ93083 61 aa5.54□□□□□ -1.52
TRAK1-209ENST00000487159 LCE2CQ5TA81 110 aa5.54□□□□□ -1.52
TRAK1-209ENST00000487159 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
TRAK1-209ENST00000487159 PKD1P98161 4303 aa5.5□□□□□ -1.53
TRAK1-209ENST00000487159 HSPG2P98160 4391 aa5.49□□□□□ -1.53
TRAK1-209ENST00000487159 MT3P25713 68 aa5.49□□□□□ -1.53
TRAK1-209ENST00000487159 LCE2DQ5TA82 110 aaPredicted RBP5.49□□□□□ -1.53
TRAK1-209ENST00000487159 LPAP08519 4548 aa5.46□□□□□ -1.53
TRAK1-209ENST00000487159 KMT2CQ8NEZ4 4911 aaKnown RBP5.46□□□□□ -1.54
TRAK1-209ENST00000487159 KRTAP19-3Q7Z4W3 81 aa5.43□□□□□ -1.54
TRAK1-209ENST00000487159 PKHD1L1Q86WI1 4243 aa5.42□□□□□ -1.54
TRAK1-209ENST00000487159 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
TRAK1-209ENST00000487159 MT4P47944 62 aa5.36□□□□□ -1.55
TRAK1-209ENST00000487159 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
TRAK1-209ENST00000487159 MT1EP04732 61 aa5.32□□□□□ -1.56
TRAK1-209ENST00000487159 FSIP2Q5CZC0 6907 aa5.26□□□□□ -1.57
TRAK1-209ENST00000487159 LCE1BQ5T7P3 118 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms