RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 FBN3Q75N90 2809 aa4.07□□□□□ -1.76
GABRE-209ENST00000486255 KRTAP10-6P60371 365 aaPredicted RBP4.05□□□□□ -1.76
GABRE-209ENST00000486255 STARD9Q9P2P6 4700 aa4.04□□□□□ -1.76
GABRE-209ENST00000486255 MEGF8Q7Z7M0 2845 aa4.02□□□□□ -1.77
GABRE-209ENST00000486255 DNAH8Q96JB1 4490 aa4.02□□□□□ -1.77
GABRE-209ENST00000486255 CRCT1Q9UGL9 99 aa4.01□□□□□ -1.77
GABRE-209ENST00000486255 DNAH2Q9P225 4427 aa4.01□□□□□ -1.77
GABRE-209ENST00000486255 DNAH7Q8WXX0 4024 aa4□□□□□ -1.77
GABRE-209ENST00000486255 KRTAP4-5Q9BYR2 181 aa4□□□□□ -1.77
GABRE-209ENST00000486255 MT1HL1P0DM35 61 aa3.99□□□□□ -1.77
GABRE-209ENST00000486255 DNAH11Q96DT5 4516 aa3.98□□□□□ -1.77
GABRE-209ENST00000486255 PRKDCP78527 4128 aaKnown RBP3.97□□□□□ -1.77
GABRE-209ENST00000486255 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
GABRE-209ENST00000486255 DNAH5Q8TE73 4624 aa3.95□□□□□ -1.78
GABRE-209ENST00000486255 DYNC1H1Q14204 4646 aaKnown RBP3.94□□□□□ -1.78
GABRE-209ENST00000486255 LORP23490 312 aaPredicted RBP3.9□□□□□ -1.78
GABRE-209ENST00000486255 DNHD1Q96M86 4753 aa3.89□□□□□ -1.79
GABRE-209ENST00000486255 FAT2Q9NYQ8 4349 aa3.88□□□□□ -1.79
GABRE-209ENST00000486255 KRTAP3-2Q9BYR7 98 aa3.87□□□□□ -1.79
GABRE-209ENST00000486255 SACSQ9NZJ4 4579 aa3.87□□□□□ -1.79
GABRE-209ENST00000486255 LRP1BQ9NZR2 4599 aa3.86□□□□□ -1.79
GABRE-209ENST00000486255 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
GABRE-209ENST00000486255 HECTD4Q9Y4D8 3996 aa3.85□□□□□ -1.79
GABRE-209ENST00000486255 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
GABRE-209ENST00000486255 COL7A1Q02388 2944 aa3.85□□□□□ -1.79
GABRE-209ENST00000486255 KMT2AQ03164 3969 aa3.84□□□□□ -1.79
GABRE-209ENST00000486255 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
GABRE-209ENST00000486255 KRTAP3-3Q9BYR6 98 aa3.83□□□□□ -1.8
GABRE-209ENST00000486255 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
GABRE-209ENST00000486255 CSMD3Q7Z407 3707 aa3.76□□□□□ -1.81
GABRE-209ENST00000486255 RYR2Q92736 4967 aa3.76□□□□□ -1.81
GABRE-209ENST00000486255 LYSTQ99698 3801 aa3.76□□□□□ -1.81
GABRE-209ENST00000486255 SRRM2Q9UQ35 2752 aaKnown RBP3.76□□□□□ -1.81
GABRE-209ENST00000486255 APOBP04114 4563 aaKnown RBP3.74□□□□□ -1.81
GABRE-209ENST00000486255 FRAS1Q86XX4 4008 aa3.74□□□□□ -1.81
GABRE-209ENST00000486255 VPS13BQ7Z7G8 4022 aa3.72□□□□□ -1.81
GABRE-209ENST00000486255 PKD1P98161 4303 aa3.7□□□□□ -1.82
GABRE-209ENST00000486255 PKHD1L1Q86WI1 4243 aa3.69□□□□□ -1.82
GABRE-209ENST00000486255 HYDINQ4G0P3 5121 aa3.69□□□□□ -1.82
GABRE-209ENST00000486255 FAT1Q14517 4588 aa3.67□□□□□ -1.82
GABRE-209ENST00000486255 RYR1P21817 5038 aa3.66□□□□□ -1.82
GABRE-209ENST00000486255 KRTAP8-1Q8IUC2 63 aa3.63□□□□□ -1.83
GABRE-209ENST00000486255 KRTAP17-1Q9BYP8 105 aa3.59□□□□□ -1.83
GABRE-209ENST00000486255 FAT3Q8TDW7 4589 aa3.59□□□□□ -1.83
GABRE-209ENST00000486255 HSPG2P98160 4391 aa3.59□□□□□ -1.84
GABRE-209ENST00000486255 RYR3Q15413 4870 aa3.55□□□□□ -1.84
GABRE-209ENST00000486255 PKHD1P08F94 4074 aa3.55□□□□□ -1.84
GABRE-209ENST00000486255 KRTAP4-1Q9BYQ7 146 aa3.54□□□□□ -1.84
GABRE-209ENST00000486255 TNXBP22105 4242 aa3.5□□□□□ -1.85
GABRE-209ENST00000486255 BIRC6Q9NR09 4857 aa3.5□□□□□ -1.85
GABRE-209ENST00000486255 SPRR2FQ96RM1 72 aa3.48□□□□□ -1.85
GABRE-209ENST00000486255 MYCBP2O75592 4640 aa3.47□□□□□ -1.85
GABRE-209ENST00000486255 KRTAP10-7P60409 375 aaPredicted RBP3.46□□□□□ -1.86
GABRE-209ENST00000486255 KIAA1109Q2LD37 5005 aa3.46□□□□□ -1.86
GABRE-209ENST00000486255 SPRR2EP22531 72 aa3.44□□□□□ -1.86
GABRE-209ENST00000486255 SPRR2BP35325 72 aa3.44□□□□□ -1.86
GABRE-209ENST00000486255 SPRR2AP35326 72 aa3.44□□□□□ -1.86
GABRE-209ENST00000486255 LRP1Q07954 4544 aaKnown RBP3.43□□□□□ -1.86
GABRE-209ENST00000486255 MT1HP80294 61 aa3.42□□□□□ -1.86
GABRE-209ENST00000486255 KMT2CQ8NEZ4 4911 aaKnown RBP3.41□□□□□ -1.86
GABRE-209ENST00000486255 MUC17Q685J3 4493 aa3.41□□□□□ -1.86
GABRE-209ENST00000486255 HERC1Q15751 4861 aa3.4□□□□□ -1.87
GABRE-209ENST00000486255 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
GABRE-209ENST00000486255 KRTAP19-5Q3LI72 72 aa3.35□□□□□ -1.87
GABRE-209ENST00000486255 SPRR2GQ9BYE4 73 aa3.35□□□□□ -1.87
GABRE-209ENST00000486255 HERC2O95714 4834 aa3.34□□□□□ -1.87
GABRE-209ENST00000486255 SPRR2DP22532 72 aa3.33□□□□□ -1.88
GABRE-209ENST00000486255 MT2AP02795 61 aa3.33□□□□□ -1.88
GABRE-209ENST00000486255 EPPK1P58107 5090 aaKnown RBP3.3□□□□□ -1.88
GABRE-209ENST00000486255 MT1FP04733 61 aa3.27□□□□□ -1.89
GABRE-209ENST00000486255 LCE2CQ5TA81 110 aa3.24□□□□□ -1.89
GABRE-209ENST00000486255 KRTAP19-2Q3LHN2 52 aa3.23□□□□□ -1.89
GABRE-209ENST00000486255 KRTAP9-2Q9BYQ4 174 aa3.23□□□□□ -1.89
GABRE-209ENST00000486255 ABCA13Q86UQ4 5058 aa3.22□□□□□ -1.89
GABRE-209ENST00000486255 KRTAP9-6A0A140TA67 174 aa3.21□□□□□ -1.89
GABRE-209ENST00000486255 LPAP08519 4548 aa3.2□□□□□ -1.9
GABRE-209ENST00000486255 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
GABRE-209ENST00000486255 KRTAP19-8Q3LI54 63 aa3.2□□□□□ -1.9
GABRE-209ENST00000486255 KRTAP19-4Q3LI73 84 aa3.2□□□□□ -1.9
GABRE-209ENST00000486255 LCE3BQ5TA77 95 aa3.19□□□□□ -1.9
GABRE-209ENST00000486255 LRP2P98164 4655 aa3.19□□□□□ -1.9
GABRE-209ENST00000486255 LCE2BO14633 110 aa3.18□□□□□ -1.9
GABRE-209ENST00000486255 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
GABRE-209ENST00000486255 KRTAP19-1Q8IUB9 90 aa3.17□□□□□ -1.9
GABRE-209ENST00000486255 PCLOQ9Y6V0 5065 aa3.16□□□□□ -1.9
GABRE-209ENST00000486255 KRTAP9-8Q9BYQ0 159 aa3.15□□□□□ -1.9
GABRE-209ENST00000486255 FLGP20930 4061 aaPredicted RBP3.12□□□□□ -1.91
GABRE-209ENST00000486255 KRTAP9-3Q9BYQ3 159 aa3.08□□□□□ -1.92
GABRE-209ENST00000486255 MT1BP07438 61 aa3.07□□□□□ -1.92
GABRE-209ENST00000486255 MT1GP13640 62 aa3.06□□□□□ -1.92
GABRE-209ENST00000486255 HMCN2Q8NDA2 5059 aa3.05□□□□□ -1.92
GABRE-209ENST00000486255 MT1XP80297 61 aa3.04□□□□□ -1.92
GABRE-209ENST00000486255 LCE2DQ5TA82 110 aaPredicted RBP3.03□□□□□ -1.92
GABRE-209ENST00000486255 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
GABRE-209ENST00000486255 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
GABRE-209ENST00000486255 MT4P47944 62 aa2.99□□□□□ -1.93
GABRE-209ENST00000486255 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
GABRE-209ENST00000486255 RNF213Q63HN8 5207 aa2.96□□□□□ -1.94
GABRE-209ENST00000486255 KRTAP9-7A8MTY7 169 aa2.96□□□□□ -1.94
GABRE-209ENST00000486255 LCE2AQ5TA79 106 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms