RNA–Protein interactions for RNA: ENST00000484958.5

FXR1-219, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 3

Gene FXR1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-219ENST00000484958 TPRXLQ17RH7 258 aa2.55□□□□□ -2
FXR1-219ENST00000484958 MYO18BQ8IUG5 2567 aa2.55□□□□□ -2
FXR1-219ENST00000484958 UBR5O95071 2799 aaPredicted RBP2.55□□□□□ -2
FXR1-219ENST00000484958 ANK2Q01484 3957 aa2.54□□□□□ -2
FXR1-219ENST00000484958 DNAH8Q96JB1 4490 aa2.54□□□□□ -2
FXR1-219ENST00000484958 NBDYA0A0U1RRE5 68 aa2.54□□□□□ -2
FXR1-219ENST00000484958 CRIPTQ9P021 101 aa2.54□□□□□ -2
FXR1-219ENST00000484958 USP24Q9UPU5 2620 aa2.54□□□□□ -2
FXR1-219ENST00000484958 VPS13DQ5THJ4 4388 aa2.53□□□□□ -2
FXR1-219ENST00000484958 KRTAP6-3Q3LI67 103 aa2.53□□□□□ -2
FXR1-219ENST00000484958 UBE2DNLQ8IWF7 75 aa2.53□□□□□ -2
FXR1-219ENST00000484958 TRRAPQ9Y4A5 3859 aa2.52□□□□□ -2.01
FXR1-219ENST00000484958 SRRM2Q9UQ35 2752 aaKnown RBP2.52□□□□□ -2.01
FXR1-219ENST00000484958 HECTD1Q9ULT8 2610 aa2.52□□□□□ -2.01
FXR1-219ENST00000484958 TENM3Q9P273 2699 aa2.52□□□□□ -2.01
FXR1-219ENST00000484958 HELZ2Q9BYK8 2649 aaKnown RBP2.52□□□□□ -2.01
FXR1-219ENST00000484958 FBN1P35555 2871 aaKnown RBP2.51□□□□□ -2.01
FXR1-219ENST00000484958 Q6ZRN7 208 aaPredicted RBP2.51□□□□□ -2.01
FXR1-219ENST00000484958 DNAH10Q8IVF4 4471 aa2.51□□□□□ -2.01
FXR1-219ENST00000484958 DYNC2H1Q8NCM8 4307 aaKnown RBP2.51□□□□□ -2.01
FXR1-219ENST00000484958 VWFP04275 2813 aa2.5□□□□□ -2.01
FXR1-219ENST00000484958 TENM4Q6N022 2769 aa2.5□□□□□ -2.01
FXR1-219ENST00000484958 PDZD2O15018 2839 aa2.5□□□□□ -2.01
FXR1-219ENST00000484958 FLG2Q5D862 2391 aaPredicted RBP2.49□□□□□ -2.01
FXR1-219ENST00000484958 DNAH17Q9UFH2 4485 aa2.49□□□□□ -2.01
FXR1-219ENST00000484958 APLNQ9ULZ1 77 aa2.49□□□□□ -2.01
FXR1-219ENST00000484958 PKD1L1Q8TDX9 2849 aa2.48□□□□□ -2.01
FXR1-219ENST00000484958 PRKDCP78527 4128 aaKnown RBP2.48□□□□□ -2.01
FXR1-219ENST00000484958 ACANP16112 2415 aa2.47□□□□□ -2.01
FXR1-219ENST00000484958 RPS29P62273 56 aaKnown RBP2.47□□□□□ -2.01
FXR1-219ENST00000484958 HUWE1Q7Z6Z7 4374 aaKnown RBP2.47□□□□□ -2.01
FXR1-219ENST00000484958 FRAS1Q86XX4 4008 aa2.46□□□□□ -2.01
FXR1-219ENST00000484958 FASNP49327 2511 aaKnown RBP2.46□□□□□ -2.01
FXR1-219ENST00000484958 DNAH9Q9NYC9 4486 aa2.46□□□□□ -2.02
FXR1-219ENST00000484958 J3QKU1 62 aa2.46□□□□□ -2.02
FXR1-219ENST00000484958 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.02
FXR1-219ENST00000484958 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
FXR1-219ENST00000484958 TEP1Q99973 2627 aaKnown RBP2.45□□□□□ -2.02
FXR1-219ENST00000484958 LYSTQ99698 3801 aa2.45□□□□□ -2.02
FXR1-219ENST00000484958 MEGF8Q7Z7M0 2845 aa2.45□□□□□ -2.02
FXR1-219ENST00000484958 DNAH7Q8WXX0 4024 aa2.44□□□□□ -2.02
FXR1-219ENST00000484958 S4R3F8 94 aa2.44□□□□□ -2.02
FXR1-219ENST00000484958 DNAH6Q9C0G6 4158 aa2.43□□□□□ -2.02
FXR1-219ENST00000484958 SMR3AQ99954 134 aa2.43□□□□□ -2.02
FXR1-219ENST00000484958 MAST4O15021 2626 aa2.43□□□□□ -2.02
FXR1-219ENST00000484958 NBEAL1Q6ZS30 2694 aa2.43□□□□□ -2.02
FXR1-219ENST00000484958 ITPR2Q14571 2701 aa2.42□□□□□ -2.02
FXR1-219ENST00000484958 PLECQ15149 4684 aaKnown RBP2.42□□□□□ -2.02
FXR1-219ENST00000484958 KRTAP13-4Q3LI77 160 aa2.42□□□□□ -2.02
FXR1-219ENST00000484958 TENM1Q9UKZ4 2725 aa2.42□□□□□ -2.02
FXR1-219ENST00000484958 ATRQ13535 2644 aa2.42□□□□□ -2.02
FXR1-219ENST00000484958 NSD1Q96L73 2696 aaPredicted RBP2.42□□□□□ -2.02
FXR1-219ENST00000484958 TGP01266 2768 aa2.41□□□□□ -2.02
FXR1-219ENST00000484958 HECTD4Q9Y4D8 3996 aa2.41□□□□□ -2.02
FXR1-219ENST00000484958 NOTCH1P46531 2555 aa2.4□□□□□ -2.02
FXR1-219ENST00000484958 A0A0D9SG42 100 aa2.4□□□□□ -2.03
FXR1-219ENST00000484958 FLNBO75369 2602 aaKnown RBP2.4□□□□□ -2.03
FXR1-219ENST00000484958 DNAH2Q9P225 4427 aa2.39□□□□□ -2.03
FXR1-219ENST00000484958 DNAH11Q96DT5 4516 aa2.39□□□□□ -2.03
FXR1-219ENST00000484958 CSMD3Q7Z407 3707 aa2.39□□□□□ -2.03
FXR1-219ENST00000484958 STAB2Q8WWQ8 2551 aa2.38□□□□□ -2.03
FXR1-219ENST00000484958 KRTAP12-1P59990 96 aa2.38□□□□□ -2.03
FXR1-219ENST00000484958 SACSQ9NZJ4 4579 aa2.38□□□□□ -2.03
FXR1-219ENST00000484958 PLAC4Q8WY50 150 aa2.37□□□□□ -2.03
FXR1-219ENST00000484958 DNHD1Q96M86 4753 aa2.36□□□□□ -2.03
FXR1-219ENST00000484958 M0QZ58 72 aa2.34□□□□□ -2.03
FXR1-219ENST00000484958 COL7A1Q02388 2944 aa2.34□□□□□ -2.04
FXR1-219ENST00000484958 COL6A5A8TX70 2615 aa2.34□□□□□ -2.04
FXR1-219ENST00000484958 STARD9Q9P2P6 4700 aa2.33□□□□□ -2.04
FXR1-219ENST00000484958 DNAH5Q8TE73 4624 aa2.33□□□□□ -2.04
FXR1-219ENST00000484958 PKHD1L1Q86WI1 4243 aa2.31□□□□□ -2.04
FXR1-219ENST00000484958 C9orf92A6NGG3 77 aa2.3□□□□□ -2.04
FXR1-219ENST00000484958 MGAM2Q2M2H8 2515 aa2.3□□□□□ -2.04
FXR1-219ENST00000484958 PRO2289Q9P1D8 64 aa2.28□□□□□ -2.04
FXR1-219ENST00000484958 KMT2AQ03164 3969 aa2.27□□□□□ -2.05
FXR1-219ENST00000484958 FBN3Q75N90 2809 aa2.27□□□□□ -2.05
FXR1-219ENST00000484958 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
FXR1-219ENST00000484958 FAT2Q9NYQ8 4349 aa2.27□□□□□ -2.05
FXR1-219ENST00000484958 KRTAP21-3Q3LHN1 58 aa2.26□□□□□ -2.05
FXR1-219ENST00000484958 STAB1Q9NY15 2570 aa2.26□□□□□ -2.05
FXR1-219ENST00000484958 DMBT1Q9UGM3 2413 aaPredicted RBP2.25□□□□□ -2.05
FXR1-219ENST00000484958 LRP1BQ9NZR2 4599 aa2.24□□□□□ -2.05
FXR1-219ENST00000484958 HYDINQ4G0P3 5121 aa2.23□□□□□ -2.05
FXR1-219ENST00000484958 PKD1P98161 4303 aa2.23□□□□□ -2.05
FXR1-219ENST00000484958 INE1O15225 51 aa2.22□□□□□ -2.05
FXR1-219ENST00000484958 VPS13BQ7Z7G8 4022 aa2.21□□□□□ -2.06
FXR1-219ENST00000484958 PKHD1P08F94 4074 aa2.21□□□□□ -2.06
FXR1-219ENST00000484958 MYCBP2O75592 4640 aa2.2□□□□□ -2.06
FXR1-219ENST00000484958 APOBP04114 4563 aaKnown RBP2.2□□□□□ -2.06
FXR1-219ENST00000484958 LRP1Q07954 4544 aaKnown RBP2.19□□□□□ -2.06
FXR1-219ENST00000484958 DYNC1H1Q14204 4646 aaKnown RBP2.19□□□□□ -2.06
FXR1-219ENST00000484958 TNXBP22105 4242 aa2.19□□□□□ -2.06
FXR1-219ENST00000484958 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
FXR1-219ENST00000484958 HSPG2P98160 4391 aa2.16□□□□□ -2.06
FXR1-219ENST00000484958 FAT3Q8TDW7 4589 aa2.13□□□□□ -2.07
FXR1-219ENST00000484958 RYR2Q92736 4967 aa2.12□□□□□ -2.07
FXR1-219ENST00000484958 FAT1Q14517 4588 aa2.12□□□□□ -2.07
FXR1-219ENST00000484958 KRTAP10-4P60372 401 aaPredicted RBP2.12□□□□□ -2.07
FXR1-219ENST00000484958 Q5VSD8 79 aa2.12□□□□□ -2.07
FXR1-219ENST00000484958 TNP1P09430 55 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms