RNA–Protein interactions for RNA: ENST00000484958.5

FXR1-219, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 3

Gene FXR1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-219ENST00000484958 AEBP2Q6ZN18 517 aaPredicted RBP29.18■■■□□ 2.26
FXR1-219ENST00000484958 CHIC1Q5VXU3 224 aa28.92■■■□□ 2.22
FXR1-219ENST00000484958 PHF23Q9BUL5 403 aaPredicted RBP25.3■■□□□ 1.64
FXR1-219ENST00000484958 SENP3Q9H4L4 574 aaPredicted RBP24.99■■□□□ 1.59
FXR1-219ENST00000484958 PLPPR3Q6T4P5 718 aa23.7■■□□□ 1.38
FXR1-219ENST00000484958 FOXD1Q16676 465 aa22.98■■□□□ 1.27
FXR1-219ENST00000484958 ADRA2BP18089 450 aa22.27■■□□□ 1.16
FXR1-219ENST00000484958 PPP6R1Q9UPN7 881 aa22.23■■□□□ 1.15
FXR1-219ENST00000484958 PIAS4Q8N2W9 510 aaPredicted RBP21.82■■□□□ 1.08
FXR1-219ENST00000484958 MSH5O43196 834 aa21.31■■□□□ 1
FXR1-219ENST00000484958 PPP4R3CPQ6ZMV5 832 aa20.82■□□□□ 0.92
FXR1-219ENST00000484958 SCAF1Q9H7N4 1312 aaKnown RBP20.7■□□□□ 0.9
FXR1-219ENST00000484958 NCBP3Q53F19 620 aaKnown RBP20.54■□□□□ 0.88
FXR1-219ENST00000484958 KCNA4P22459 653 aa20.53■□□□□ 0.88
FXR1-219ENST00000484958 CNKSR2Q8WXI2 1034 aa20.27■□□□□ 0.84
FXR1-219ENST00000484958 MAPK8IP2Q13387 824 aaPredicted RBP20.08■□□□□ 0.81
FXR1-219ENST00000484958 NPM3O75607 178 aaKnown RBP20■□□□□ 0.79
FXR1-219ENST00000484958 DMRT2Q9Y5R5 561 aa19.91■□□□□ 0.78
FXR1-219ENST00000484958 RNF216Q9NWF9 866 aaPredicted RBP19.8■□□□□ 0.76
FXR1-219ENST00000484958 SLC4A1APQ9BWU0 796 aaKnown RBP19.72■□□□□ 0.75
FXR1-219ENST00000484958 HOXD11P31277 338 aaPredicted RBP19.61■□□□□ 0.73
FXR1-219ENST00000484958 DNAJC5BQ9UF47 199 aa19.54■□□□□ 0.72
FXR1-219ENST00000484958 EHMT2Q96KQ7 1210 aa19.35■□□□□ 0.69
FXR1-219ENST00000484958 DCAF8L1A6NGE4 600 aa19.06■□□□□ 0.64
FXR1-219ENST00000484958 CSRNP3Q8WYN3 585 aa18.99■□□□□ 0.63
FXR1-219ENST00000484958 FOXD4L1Q9NU39 408 aa18.96■□□□□ 0.63
FXR1-219ENST00000484958 ZBTB22O15209 634 aa18.8■□□□□ 0.6
FXR1-219ENST00000484958 SLC4A2P04920 1241 aa18.77■□□□□ 0.6
FXR1-219ENST00000484958 POTEDQ86YR6 584 aa18.77■□□□□ 0.6
FXR1-219ENST00000484958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.74■□□□□ 0.597e-6■□□□□ 10.8
FXR1-219ENST00000484958 MYCNP04198 464 aaPredicted RBP18.61■□□□□ 0.57
FXR1-219ENST00000484958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.49■□□□□ 0.55
FXR1-219ENST00000484958 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
FXR1-219ENST00000484958 ATXN8OSP0DMR3 200 aa18.37■□□□□ 0.53
FXR1-219ENST00000484958 SAMD1Q6SPF0 538 aaPredicted RBP18.36■□□□□ 0.53
FXR1-219ENST00000484958 U3KPZ7 1027 aaPredicted RBP18.33■□□□□ 0.52
FXR1-219ENST00000484958 APLP2Q06481 763 aa18.29■□□□□ 0.52
FXR1-219ENST00000484958 RNF39Q9H2S5 420 aa18.16■□□□□ 0.5
FXR1-219ENST00000484958 C1QBPQ07021 282 aaKnown RBP18.08■□□□□ 0.48
FXR1-219ENST00000484958 ZNF219Q9P2Y4 722 aaPredicted RBP17.85■□□□□ 0.45
FXR1-219ENST00000484958 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
FXR1-219ENST00000484958 CAPN15O75808 1086 aa17.76■□□□□ 0.43
FXR1-219ENST00000484958 TRHP20396 242 aaPredicted RBP17.71■□□□□ 0.43
FXR1-219ENST00000484958 SPINK5Q9NQ38 1064 aaPredicted RBP17.7■□□□□ 0.42
FXR1-219ENST00000484958 CACNB1Q02641 598 aaPredicted RBP17.56■□□□□ 0.4
FXR1-219ENST00000484958 POLA2Q14181 598 aa17.47■□□□□ 0.39
FXR1-219ENST00000484958 ZBTB12Q9Y330 459 aaPredicted RBP17.42■□□□□ 0.38
FXR1-219ENST00000484958 FBLN2P98095 1184 aa17.4■□□□□ 0.38
FXR1-219ENST00000484958 ABCB7O75027 752 aa17.34■□□□□ 0.37
FXR1-219ENST00000484958 DSG3P32926 999 aa17.34■□□□□ 0.37
FXR1-219ENST00000484958 FKBP8Q14318 412 aa17.23■□□□□ 0.35
FXR1-219ENST00000484958 MKRN4PQ13434 485 aaPredicted RBP17.12■□□□□ 0.33
FXR1-219ENST00000484958 SPDYE4A6NLX3 237 aa17.02■□□□□ 0.32
FXR1-219ENST00000484958 SPDYE2BA6NHP3 402 aa16.88■□□□□ 0.29
FXR1-219ENST00000484958 SPDYE6P0CI01 402 aa16.88■□□□□ 0.29
FXR1-219ENST00000484958 SPDYE2Q495Y8 402 aa16.88■□□□□ 0.29
FXR1-219ENST00000484958 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
FXR1-219ENST00000484958 ZNF692Q9BU19 519 aaPredicted RBP16.8■□□□□ 0.28
FXR1-219ENST00000484958 FBXO3Q9UK99 471 aa16.75■□□□□ 0.27
FXR1-219ENST00000484958 RBM42Q9BTD8 480 aaKnown RBP16.73■□□□□ 0.27
FXR1-219ENST00000484958 PROM2Q8N271 834 aa16.72■□□□□ 0.27
FXR1-219ENST00000484958 SSUH2Q9Y2M2 353 aa16.67■□□□□ 0.26
FXR1-219ENST00000484958 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
FXR1-219ENST00000484958 STAG3Q9UJ98 1225 aa16.51■□□□□ 0.23
FXR1-219ENST00000484958 AKT1S1Q96B36 256 aa16.5■□□□□ 0.23
FXR1-219ENST00000484958 VASPP50552 380 aaPredicted RBP16.35■□□□□ 0.21
FXR1-219ENST00000484958 SPDYE1Q8NFV5 336 aaPredicted RBP16.33■□□□□ 0.2
FXR1-219ENST00000484958 AMER1Q5JTC6 1135 aaPredicted RBP16.27■□□□□ 0.2
FXR1-219ENST00000484958 REM2Q8IYK8 340 aaPredicted RBP16.25■□□□□ 0.19
FXR1-219ENST00000484958 PLEKHG5O94827 1062 aa16.24■□□□□ 0.19
FXR1-219ENST00000484958 PLCD3Q8N3E9 789 aa16.19■□□□□ 0.18
FXR1-219ENST00000484958 CLEC11AQ9Y240 323 aa16.16■□□□□ 0.18
FXR1-219ENST00000484958 MIER1Q8N108 512 aa16.15■□□□□ 0.18
FXR1-219ENST00000484958 ZBTB47Q9UFB7 747 aaPredicted RBP16.13■□□□□ 0.17
FXR1-219ENST00000484958 PRR29P0C7W0 189 aa16.11■□□□□ 0.17
FXR1-219ENST00000484958 KLHL34Q8N239 644 aa16.09■□□□□ 0.17
FXR1-219ENST00000484958 IFNLR1Q8IU57 520 aaPredicted RBP16.07■□□□□ 0.16
FXR1-219ENST00000484958 PITPNM1O00562 1244 aa16.01■□□□□ 0.15
FXR1-219ENST00000484958 RTN4Q9NQC3 1192 aaKnown RBP16.01■□□□□ 0.15
FXR1-219ENST00000484958 SPOCK2Q92563 424 aa15.97■□□□□ 0.15
FXR1-219ENST00000484958 CREBZFQ9NS37 354 aa15.83■□□□□ 0.12
FXR1-219ENST00000484958 NPM1P06748 294 aaKnown RBP eCLIP15.79■□□□□ 0.12
FXR1-219ENST00000484958 CHRDL2Q6WN34 429 aa15.79■□□□□ 0.12
FXR1-219ENST00000484958 FXR2P51116 673 aaKnown RBP eCLIP15.71■□□□□ 0.11
FXR1-219ENST00000484958 GSE1Q14687 1217 aa15.68■□□□□ 0.1
FXR1-219ENST00000484958 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
FXR1-219ENST00000484958 PRKAR2AP13861 404 aaKnown RBP15.66■□□□□ 0.1
FXR1-219ENST00000484958 MNX1P50219 401 aaPredicted RBP15.66■□□□□ 0.1
FXR1-219ENST00000484958 CIZ1Q9ULV3 898 aaPredicted RBP15.65■□□□□ 0.1
FXR1-219ENST00000484958 FAM212AQ96EL1 285 aa15.63■□□□□ 0.09
FXR1-219ENST00000484958 CHADLQ6NUI6 762 aa15.62■□□□□ 0.09
FXR1-219ENST00000484958 NUBP1P53384 320 aa15.61■□□□□ 0.09
FXR1-219ENST00000484958 PKD2Q13563 968 aa15.61■□□□□ 0.09
FXR1-219ENST00000484958 FARP1Q9Y4F1 1045 aaPredicted RBP15.61■□□□□ 0.09
FXR1-219ENST00000484958 ECM2O94769 699 aaPredicted RBP15.58■□□□□ 0.08
FXR1-219ENST00000484958 DCAF8Q5TAQ9 597 aa15.58■□□□□ 0.08
FXR1-219ENST00000484958 PIP4P2Q8N4L2 257 aa15.58■□□□□ 0.08
FXR1-219ENST00000484958 PAK3O75914 559 aaPredicted RBP15.48■□□□□ 0.07
FXR1-219ENST00000484958 DCAF8L2P0C7V8 631 aa15.46■□□□□ 0.07
FXR1-219ENST00000484958 RASEFQ8IZ41 740 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms