RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 DYNC2H1Q8NCM8 4307 aaKnown RBP0.48□□□□□ -2.33
ITGB1-213ENST00000484088 TGP01266 2768 aa0.48□□□□□ -2.33
ITGB1-213ENST00000484088 SACSQ9NZJ4 4579 aa0.48□□□□□ -2.33
ITGB1-213ENST00000484088 ANKRD11Q6UB99 2663 aaPredicted RBP0.48□□□□□ -2.33
ITGB1-213ENST00000484088 MYO18BQ8IUG5 2567 aa0.48□□□□□ -2.33
ITGB1-213ENST00000484088 DOPEY1Q5JWR5 2465 aa0.48□□□□□ -2.33
ITGB1-213ENST00000484088 MKI67P46013 3256 aaKnown RBP0.48□□□□□ -2.33
ITGB1-213ENST00000484088 DNAH8Q96JB1 4490 aa0.48□□□□□ -2.33
ITGB1-213ENST00000484088 ZZEF1O43149 2961 aa0.48□□□□□ -2.33
ITGB1-213ENST00000484088 CELSR3Q9NYQ7 3312 aa0.48□□□□□ -2.33
ITGB1-213ENST00000484088 TLN2Q9Y4G6 2542 aa0.47□□□□□ -2.33
ITGB1-213ENST00000484088 HTTP42858 3142 aa0.47□□□□□ -2.33
ITGB1-213ENST00000484088 NBEAL2Q6ZNJ1 2754 aa0.47□□□□□ -2.33
ITGB1-213ENST00000484088 ATMQ13315 3056 aa0.47□□□□□ -2.33
ITGB1-213ENST00000484088 ITPR2Q14571 2701 aa0.47□□□□□ -2.33
ITGB1-213ENST00000484088 NBEAL1Q6ZS30 2694 aa0.47□□□□□ -2.33
ITGB1-213ENST00000484088 FAT2Q9NYQ8 4349 aa0.47□□□□□ -2.33
ITGB1-213ENST00000484088 DMXL2Q8TDJ6 3036 aa0.47□□□□□ -2.33
ITGB1-213ENST00000484088 VPS13AQ96RL7 3174 aa0.47□□□□□ -2.33
ITGB1-213ENST00000484088 PKD1L1Q8TDX9 2849 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 TLN1Q9Y490 2541 aaKnown RBP0.46□□□□□ -2.34
ITGB1-213ENST00000484088 ZNF469Q96JG9 3925 aaPredicted RBP0.46□□□□□ -2.34
ITGB1-213ENST00000484088 DNAH12Q6ZR08 3092 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 ACACBO00763 2458 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 ANK3Q12955 4377 aaKnown RBP0.46□□□□□ -2.34
ITGB1-213ENST00000484088 RELNP78509 3460 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 C5orf42Q9H799 3197 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 PKHD1L1Q86WI1 4243 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 FLNBO75369 2602 aaKnown RBP0.46□□□□□ -2.34
ITGB1-213ENST00000484088 CEP295Q9C0D2 2601 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 NOTCH1P46531 2555 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 USP9XQ93008 2570 aaPredicted RBP0.46□□□□□ -2.34
ITGB1-213ENST00000484088 STAB1Q9NY15 2570 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 CSMD1Q96PZ7 3565 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 PRM1P04553 51 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 DNAH7Q8WXX0 4024 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 TACC2O95359 2948 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 CUBNO60494 3623 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 TEP1Q99973 2627 aaKnown RBP0.46□□□□□ -2.34
ITGB1-213ENST00000484088 SVEP1Q4LDE5 3571 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 PDZD2O15018 2839 aa0.46□□□□□ -2.34
ITGB1-213ENST00000484088 GOLGB1Q14789 3259 aaKnown RBP0.46□□□□□ -2.34
ITGB1-213ENST00000484088 HIVEP1P15822 2718 aa0.45□□□□□ -2.34
ITGB1-213ENST00000484088 CFAP47Q6ZTR5 3102 aa0.45□□□□□ -2.34
ITGB1-213ENST00000484088 DNAH2Q9P225 4427 aa0.45□□□□□ -2.34
ITGB1-213ENST00000484088 BOD1L1Q8NFC6 3051 aa0.45□□□□□ -2.34
ITGB1-213ENST00000484088 DNAH1Q9P2D7 4330 aa0.45□□□□□ -2.34
ITGB1-213ENST00000484088 DMXL1Q9Y485 3027 aa0.45□□□□□ -2.34
ITGB1-213ENST00000484088 UTRNP46939 3433 aa0.45□□□□□ -2.34
ITGB1-213ENST00000484088 SMR3BP02814 79 aaPredicted RBP0.45□□□□□ -2.34
ITGB1-213ENST00000484088 MT1AP04731 61 aa0.45□□□□□ -2.34
ITGB1-213ENST00000484088 FRAS1Q86XX4 4008 aa0.45□□□□□ -2.34
ITGB1-213ENST00000484088 FREM2Q5SZK8 3169 aa0.45□□□□□ -2.34
ITGB1-213ENST00000484088 DNAH10Q8IVF4 4471 aa0.45□□□□□ -2.34
ITGB1-213ENST00000484088 FASNP49327 2511 aaKnown RBP0.44□□□□□ -2.34
ITGB1-213ENST00000484088 CMYA5Q8N3K9 4069 aa0.44□□□□□ -2.34
ITGB1-213ENST00000484088 SPTAN1Q13813 2472 aaKnown RBP0.44□□□□□ -2.34
ITGB1-213ENST00000484088 MXRA5Q9NR99 2828 aa0.44□□□□□ -2.34
ITGB1-213ENST00000484088 ZANQ9Y493 2812 aa0.44□□□□□ -2.34
ITGB1-213ENST00000484088 FLNAP21333 2647 aaKnown RBP0.44□□□□□ -2.34
ITGB1-213ENST00000484088 TNXBP22105 4242 aa0.44□□□□□ -2.34
ITGB1-213ENST00000484088 FBN2P35556 2912 aa0.44□□□□□ -2.34
ITGB1-213ENST00000484088 HECTD4Q9Y4D8 3996 aa0.44□□□□□ -2.34
ITGB1-213ENST00000484088 HRNRQ86YZ3 2850 aaPredicted RBP0.44□□□□□ -2.34
ITGB1-213ENST00000484088 WDFY4Q6ZS81 3184 aa0.44□□□□□ -2.34
ITGB1-213ENST00000484088 FLGP20930 4061 aaPredicted RBP0.43□□□□□ -2.34
ITGB1-213ENST00000484088 XIRP2A4UGR9 3374 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 MGAM2Q2M2H8 2515 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 HUWE1Q7Z6Z7 4374 aaKnown RBP0.43□□□□□ -2.34
ITGB1-213ENST00000484088 AHNAKQ09666 5890 aaKnown RBP0.43□□□□□ -2.34
ITGB1-213ENST00000484088 TENM3Q9P273 2699 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 DNAH9Q9NYC9 4486 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 KALRNO60229 2985 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 DCHS1Q96JQ0 3298 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 TRRAPQ9Y4A5 3859 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 DNAH6Q9C0G6 4158 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 USP34Q70CQ2 3546 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 PKD1P98161 4303 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 SYNE1Q8NF91 8797 aaKnown RBP0.43□□□□□ -2.34
ITGB1-213ENST00000484088 SPRR2BP35325 72 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 SPRR2AP35326 72 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 ASPMQ8IZT6 3477 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 VPS13CQ709C8 3753 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 SPEGQ15772 3267 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 MAST4O15021 2626 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 STAB2Q8WWQ8 2551 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 MUC3AQ02505 3323 aa0.43□□□□□ -2.34
ITGB1-213ENST00000484088 MYO9AB2RTY4 2548 aa0.42□□□□□ -2.34
ITGB1-213ENST00000484088 LOC400499M0QZD8 3231 aa0.42□□□□□ -2.34
ITGB1-213ENST00000484088 MUC5BQ9HC84 5762 aaPredicted RBP0.42□□□□□ -2.34
ITGB1-213ENST00000484088 EP400Q96L91 3159 aa0.42□□□□□ -2.34
ITGB1-213ENST00000484088 APOBP04114 4563 aaKnown RBP0.42□□□□□ -2.34
ITGB1-213ENST00000484088 SPRR2DP22532 72 aa0.42□□□□□ -2.34
ITGB1-213ENST00000484088 LAMA3Q16787 3333 aa0.42□□□□□ -2.34
ITGB1-213ENST00000484088 HSPG2P98160 4391 aa0.42□□□□□ -2.34
ITGB1-213ENST00000484088 LAMA1P25391 3075 aa0.41□□□□□ -2.34
ITGB1-213ENST00000484088 DNAH17Q9UFH2 4485 aa0.41□□□□□ -2.34
ITGB1-213ENST00000484088 KRTAP19-5Q3LI72 72 aa0.41□□□□□ -2.34
ITGB1-213ENST00000484088 KRTAP19-3Q7Z4W3 81 aa0.41□□□□□ -2.34
ITGB1-213ENST00000484088 IGSF10Q6WRI0 2623 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms