RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 DNAH17Q9UFH2 4485 aa5.5□□□□□ -1.53
DDX39B-219ENST00000481456 VPS13DQ5THJ4 4388 aa5.46□□□□□ -1.53
DDX39B-219ENST00000481456 KRTAP10-4P60372 401 aaPredicted RBP5.46□□□□□ -1.54
DDX39B-219ENST00000481456 DNAH8Q96JB1 4490 aa5.46□□□□□ -1.54
DDX39B-219ENST00000481456 DNAH2Q9P225 4427 aa5.37□□□□□ -1.55
DDX39B-219ENST00000481456 DNAH11Q96DT5 4516 aa5.36□□□□□ -1.55
DDX39B-219ENST00000481456 CMYA5Q8N3K9 4069 aa5.33□□□□□ -1.56
DDX39B-219ENST00000481456 ANK2Q01484 3957 aa5.32□□□□□ -1.56
DDX39B-219ENST00000481456 STARD9Q9P2P6 4700 aa5.31□□□□□ -1.56
DDX39B-219ENST00000481456 DYNC2H1Q8NCM8 4307 aaKnown RBP5.3□□□□□ -1.56
DDX39B-219ENST00000481456 MT1HL1P0DM35 61 aa5.29□□□□□ -1.56
DDX39B-219ENST00000481456 DNAH5Q8TE73 4624 aa5.27□□□□□ -1.57
DDX39B-219ENST00000481456 FRAS1Q86XX4 4008 aa5.26□□□□□ -1.57
DDX39B-219ENST00000481456 HECTD4Q9Y4D8 3996 aa5.2□□□□□ -1.58
DDX39B-219ENST00000481456 LRP1BQ9NZR2 4599 aa5.2□□□□□ -1.58
DDX39B-219ENST00000481456 LYSTQ99698 3801 aa5.19□□□□□ -1.58
DDX39B-219ENST00000481456 KMT2AQ03164 3969 aa5.17□□□□□ -1.58
DDX39B-219ENST00000481456 SACSQ9NZJ4 4579 aa5.17□□□□□ -1.58
DDX39B-219ENST00000481456 VPS13BQ7Z7G8 4022 aa5.12□□□□□ -1.59
DDX39B-219ENST00000481456 LORP23490 312 aaPredicted RBP5.11□□□□□ -1.59
DDX39B-219ENST00000481456 DNAH7Q8WXX0 4024 aa5.1□□□□□ -1.59
DDX39B-219ENST00000481456 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
DDX39B-219ENST00000481456 DNAH6Q9C0G6 4158 aa5.1□□□□□ -1.59
DDX39B-219ENST00000481456 DYNC1H1Q14204 4646 aaKnown RBP5.08□□□□□ -1.6
DDX39B-219ENST00000481456 PRKDCP78527 4128 aaKnown RBP5.06□□□□□ -1.6
DDX39B-219ENST00000481456 FAT2Q9NYQ8 4349 aa5.02□□□□□ -1.61
DDX39B-219ENST00000481456 FAT1Q14517 4588 aa5.02□□□□□ -1.61
DDX39B-219ENST00000481456 INE1O15225 51 aa5.01□□□□□ -1.61
DDX39B-219ENST00000481456 KRTAP4-5Q9BYR2 181 aa4.91□□□□□ -1.62
DDX39B-219ENST00000481456 APOBP04114 4563 aaKnown RBP4.89□□□□□ -1.63
DDX39B-219ENST00000481456 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
DDX39B-219ENST00000481456 DNHD1Q96M86 4753 aa4.85□□□□□ -1.63
DDX39B-219ENST00000481456 FAT3Q8TDW7 4589 aa4.84□□□□□ -1.63
DDX39B-219ENST00000481456 KRTAP4-1Q9BYQ7 146 aa4.84□□□□□ -1.63
DDX39B-219ENST00000481456 KRTAP10-12P60413 245 aa4.83□□□□□ -1.64
DDX39B-219ENST00000481456 KRTAP12-3P60328 96 aa4.79□□□□□ -1.64
DDX39B-219ENST00000481456 PKD1P98161 4303 aa4.76□□□□□ -1.65
DDX39B-219ENST00000481456 PKHD1L1Q86WI1 4243 aa4.75□□□□□ -1.65
DDX39B-219ENST00000481456 HYDINQ4G0P3 5121 aa4.75□□□□□ -1.65
DDX39B-219ENST00000481456 MYCBP2O75592 4640 aa4.74□□□□□ -1.65
DDX39B-219ENST00000481456 CRCT1Q9UGL9 99 aa4.72□□□□□ -1.65
DDX39B-219ENST00000481456 LRP1Q07954 4544 aaKnown RBP4.69□□□□□ -1.66
DDX39B-219ENST00000481456 SPRR2GQ9BYE4 73 aa4.66□□□□□ -1.66
DDX39B-219ENST00000481456 PKHD1P08F94 4074 aa4.65□□□□□ -1.66
DDX39B-219ENST00000481456 RYR1P21817 5038 aa4.65□□□□□ -1.67
DDX39B-219ENST00000481456 KRTAP17-1Q9BYP8 105 aa4.6□□□□□ -1.67
DDX39B-219ENST00000481456 RYR2Q92736 4967 aa4.58□□□□□ -1.68
DDX39B-219ENST00000481456 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
DDX39B-219ENST00000481456 TNXBP22105 4242 aa4.57□□□□□ -1.68
DDX39B-219ENST00000481456 RYR3Q15413 4870 aa4.53□□□□□ -1.68
DDX39B-219ENST00000481456 KRTAP8-1Q8IUC2 63 aa4.53□□□□□ -1.68
DDX39B-219ENST00000481456 HSPG2P98160 4391 aa4.52□□□□□ -1.69
DDX39B-219ENST00000481456 MT1HP80294 61 aa4.52□□□□□ -1.69
DDX39B-219ENST00000481456 MT2AP02795 61 aa4.51□□□□□ -1.69
DDX39B-219ENST00000481456 LRP2P98164 4655 aa4.49□□□□□ -1.69
DDX39B-219ENST00000481456 KIAA1109Q2LD37 5005 aa4.48□□□□□ -1.69
DDX39B-219ENST00000481456 MT1FP04733 61 aa4.46□□□□□ -1.7
DDX39B-219ENST00000481456 KRTAP19-1Q8IUB9 90 aa4.44□□□□□ -1.7
DDX39B-219ENST00000481456 KMT2CQ8NEZ4 4911 aaKnown RBP4.43□□□□□ -1.7
DDX39B-219ENST00000481456 LPAP08519 4548 aa4.36□□□□□ -1.71
DDX39B-219ENST00000481456 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
DDX39B-219ENST00000481456 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
DDX39B-219ENST00000481456 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
DDX39B-219ENST00000481456 KRTAP19-5Q3LI72 72 aa4.34□□□□□ -1.72
DDX39B-219ENST00000481456 KRTAP19-2Q3LHN2 52 aa4.33□□□□□ -1.72
DDX39B-219ENST00000481456 MT1XP80297 61 aa4.29□□□□□ -1.72
DDX39B-219ENST00000481456 KRTAP10-7P60409 375 aaPredicted RBP4.28□□□□□ -1.72
DDX39B-219ENST00000481456 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
DDX39B-219ENST00000481456 LCE2CQ5TA81 110 aa4.23□□□□□ -1.73
DDX39B-219ENST00000481456 MT1BP07438 61 aa4.23□□□□□ -1.73
DDX39B-219ENST00000481456 FLGP20930 4061 aaPredicted RBP4.22□□□□□ -1.73
DDX39B-219ENST00000481456 HERC1Q15751 4861 aa4.21□□□□□ -1.74
DDX39B-219ENST00000481456 MUC17Q685J3 4493 aa4.2□□□□□ -1.74
DDX39B-219ENST00000481456 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
DDX39B-219ENST00000481456 KRTAP9-8Q9BYQ0 159 aa4.19□□□□□ -1.74
DDX39B-219ENST00000481456 HERC2O95714 4834 aa4.15□□□□□ -1.75
DDX39B-219ENST00000481456 KRTAP9-3Q9BYQ3 159 aa4.05□□□□□ -1.76
DDX39B-219ENST00000481456 BIRC6Q9NR09 4857 aa4.01□□□□□ -1.77
DDX39B-219ENST00000481456 ABCA13Q86UQ4 5058 aa3.97□□□□□ -1.77
DDX39B-219ENST00000481456 EPPK1P58107 5090 aaKnown RBP3.96□□□□□ -1.78
DDX39B-219ENST00000481456 KRTAP4-8A0A0G2JLE6 195 aa3.96□□□□□ -1.78
DDX39B-219ENST00000481456 KRTAP4-8Q9BYQ9 185 aa3.96□□□□□ -1.78
DDX39B-219ENST00000481456 SPRR2EP22531 72 aa3.92□□□□□ -1.78
DDX39B-219ENST00000481456 SPRR2BP35325 72 aa3.92□□□□□ -1.78
DDX39B-219ENST00000481456 SPRR2AP35326 72 aa3.92□□□□□ -1.78
DDX39B-219ENST00000481456 KRTAP12-4P60329 112 aa3.87□□□□□ -1.79
DDX39B-219ENST00000481456 PCLOQ9Y6V0 5065 aa3.86□□□□□ -1.79
DDX39B-219ENST00000481456 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.79
DDX39B-219ENST00000481456 HMCN2Q8NDA2 5059 aa3.83□□□□□ -1.8
DDX39B-219ENST00000481456 MT1GP13640 62 aa3.83□□□□□ -1.8
DDX39B-219ENST00000481456 LCE2BO14633 110 aa3.82□□□□□ -1.8
DDX39B-219ENST00000481456 MT1LQ93083 61 aa3.82□□□□□ -1.8
DDX39B-219ENST00000481456 SPRR2DP22532 72 aa3.81□□□□□ -1.8
DDX39B-219ENST00000481456 MT1EP04732 61 aa3.77□□□□□ -1.81
DDX39B-219ENST00000481456 LCE3BQ5TA77 95 aa3.76□□□□□ -1.81
DDX39B-219ENST00000481456 KRTAP2-3P0C7H8 128 aa3.75□□□□□ -1.81
DDX39B-219ENST00000481456 KRTAP2-4Q9BYR9 128 aa3.75□□□□□ -1.81
DDX39B-219ENST00000481456 KRTAP2-1Q9BYU5 128 aa3.75□□□□□ -1.81
DDX39B-219ENST00000481456 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
DDX39B-219ENST00000481456 FAT4Q6V0I7 4981 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms