RNA–Protein interactions for RNA: ENST00000477054.6

GSDMB-208, Transcript of gasdermin B, humanhuman

TSL 5

Gene GSDMB, Length 4,655 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-208ENST00000477054 VPS13DQ5THJ4 4388 aa4.72□□□□□ -1.65
GSDMB-208ENST00000477054 COL7A1Q02388 2944 aa4.72□□□□□ -1.65
GSDMB-208ENST00000477054 MT1HL1P0DM35 61 aa4.72□□□□□ -1.65
GSDMB-208ENST00000477054 DNAH17Q9UFH2 4485 aa4.69□□□□□ -1.66
GSDMB-208ENST00000477054 KRTAP3-3Q9BYR6 98 aa4.67□□□□□ -1.66
GSDMB-208ENST00000477054 DYNC2H1Q8NCM8 4307 aaKnown RBP4.66□□□□□ -1.66
GSDMB-208ENST00000477054 KRTAP3-2Q9BYR7 98 aa4.64□□□□□ -1.67
GSDMB-208ENST00000477054 STARD9Q9P2P6 4700 aa4.64□□□□□ -1.67
GSDMB-208ENST00000477054 DNAH5Q8TE73 4624 aa4.62□□□□□ -1.67
GSDMB-208ENST00000477054 DNAH11Q96DT5 4516 aa4.62□□□□□ -1.67
GSDMB-208ENST00000477054 FRAS1Q86XX4 4008 aa4.61□□□□□ -1.67
GSDMB-208ENST00000477054 PRKDCP78527 4128 aaKnown RBP4.59□□□□□ -1.67
GSDMB-208ENST00000477054 HECTD4Q9Y4D8 3996 aa4.58□□□□□ -1.68
GSDMB-208ENST00000477054 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
GSDMB-208ENST00000477054 DNAH2Q9P225 4427 aa4.57□□□□□ -1.68
GSDMB-208ENST00000477054 DNAH8Q96JB1 4490 aa4.54□□□□□ -1.68
GSDMB-208ENST00000477054 KMT2AQ03164 3969 aa4.51□□□□□ -1.69
GSDMB-208ENST00000477054 DNHD1Q96M86 4753 aa4.5□□□□□ -1.69
GSDMB-208ENST00000477054 KRTAP4-5Q9BYR2 181 aa4.49□□□□□ -1.69
GSDMB-208ENST00000477054 DYNC1H1Q14204 4646 aaKnown RBP4.48□□□□□ -1.69
GSDMB-208ENST00000477054 LRP1BQ9NZR2 4599 aa4.47□□□□□ -1.69
GSDMB-208ENST00000477054 PRO2289Q9P1D8 64 aa4.46□□□□□ -1.7
GSDMB-208ENST00000477054 DNAH6Q9C0G6 4158 aa4.45□□□□□ -1.7
GSDMB-208ENST00000477054 INE1O15225 51 aa4.44□□□□□ -1.7
GSDMB-208ENST00000477054 SACSQ9NZJ4 4579 aa4.43□□□□□ -1.7
GSDMB-208ENST00000477054 FAT2Q9NYQ8 4349 aa4.41□□□□□ -1.7
GSDMB-208ENST00000477054 FAT1Q14517 4588 aa4.39□□□□□ -1.71
GSDMB-208ENST00000477054 PKD1P98161 4303 aa4.38□□□□□ -1.71
GSDMB-208ENST00000477054 VPS13BQ7Z7G8 4022 aa4.37□□□□□ -1.71
GSDMB-208ENST00000477054 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
GSDMB-208ENST00000477054 HYDINQ4G0P3 5121 aa4.33□□□□□ -1.72
GSDMB-208ENST00000477054 LORP23490 312 aaPredicted RBP4.3□□□□□ -1.72
GSDMB-208ENST00000477054 KRTAP4-1Q9BYQ7 146 aa4.24□□□□□ -1.73
GSDMB-208ENST00000477054 PKHD1P08F94 4074 aa4.22□□□□□ -1.73
GSDMB-208ENST00000477054 APOBP04114 4563 aaKnown RBP4.22□□□□□ -1.73
GSDMB-208ENST00000477054 RYR1P21817 5038 aa4.19□□□□□ -1.74
GSDMB-208ENST00000477054 KRTAP17-1Q9BYP8 105 aa4.15□□□□□ -1.74
GSDMB-208ENST00000477054 RYR2Q92736 4967 aa4.13□□□□□ -1.75
GSDMB-208ENST00000477054 FAT3Q8TDW7 4589 aa4.12□□□□□ -1.75
GSDMB-208ENST00000477054 KRTAP10-12P60413 245 aa4.12□□□□□ -1.75
GSDMB-208ENST00000477054 LRP1Q07954 4544 aaKnown RBP4.11□□□□□ -1.75
GSDMB-208ENST00000477054 KIAA1109Q2LD37 5005 aa4.1□□□□□ -1.75
GSDMB-208ENST00000477054 PKHD1L1Q86WI1 4243 aa4.1□□□□□ -1.75
GSDMB-208ENST00000477054 MYCBP2O75592 4640 aa4.1□□□□□ -1.75
GSDMB-208ENST00000477054 RYR3Q15413 4870 aa4.09□□□□□ -1.76
GSDMB-208ENST00000477054 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
GSDMB-208ENST00000477054 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
GSDMB-208ENST00000477054 SPRR2GQ9BYE4 73 aa4.03□□□□□ -1.76
GSDMB-208ENST00000477054 MT1HP80294 61 aa4.03□□□□□ -1.77
GSDMB-208ENST00000477054 HSPG2P98160 4391 aa4.01□□□□□ -1.77
GSDMB-208ENST00000477054 MT2AP02795 61 aa3.98□□□□□ -1.77
GSDMB-208ENST00000477054 TNXBP22105 4242 aa3.95□□□□□ -1.78
GSDMB-208ENST00000477054 KMT2CQ8NEZ4 4911 aaKnown RBP3.94□□□□□ -1.78
GSDMB-208ENST00000477054 SPRR5A0A1B0GTR4 108 aa3.92□□□□□ -1.78
GSDMB-208ENST00000477054 MT1FP04733 61 aa3.92□□□□□ -1.78
GSDMB-208ENST00000477054 LRP2P98164 4655 aa3.89□□□□□ -1.79
GSDMB-208ENST00000477054 LPAP08519 4548 aa3.88□□□□□ -1.79
GSDMB-208ENST00000477054 KRTAP19-1Q8IUB9 90 aa3.84□□□□□ -1.79
GSDMB-208ENST00000477054 HERC2O95714 4834 aa3.84□□□□□ -1.79
GSDMB-208ENST00000477054 LCE2CQ5TA81 110 aa3.83□□□□□ -1.8
GSDMB-208ENST00000477054 LCE2DQ5TA82 110 aaPredicted RBP3.83□□□□□ -1.8
GSDMB-208ENST00000477054 KRTAP19-8Q3LI54 63 aa3.8□□□□□ -1.8
GSDMB-208ENST00000477054 KRTAP8-1Q8IUC2 63 aa3.79□□□□□ -1.8
GSDMB-208ENST00000477054 LCE2AQ5TA79 106 aaPredicted RBP3.79□□□□□ -1.8
GSDMB-208ENST00000477054 BIRC6Q9NR09 4857 aa3.77□□□□□ -1.81
GSDMB-208ENST00000477054 KRTAP19-2Q3LHN2 52 aa3.77□□□□□ -1.81
GSDMB-208ENST00000477054 KRTAP9-8Q9BYQ0 159 aa3.71□□□□□ -1.82
GSDMB-208ENST00000477054 ABCA13Q86UQ4 5058 aa3.71□□□□□ -1.82
GSDMB-208ENST00000477054 HERC1Q15751 4861 aa3.7□□□□□ -1.82
GSDMB-208ENST00000477054 MT1XP80297 61 aa3.68□□□□□ -1.82
GSDMB-208ENST00000477054 KRTAP19-5Q3LI72 72 aa3.68□□□□□ -1.82
GSDMB-208ENST00000477054 MT1BP07438 61 aa3.68□□□□□ -1.82
GSDMB-208ENST00000477054 CRCT1Q9UGL9 99 aa3.67□□□□□ -1.82
GSDMB-208ENST00000477054 EPPK1P58107 5090 aaKnown RBP3.66□□□□□ -1.82
GSDMB-208ENST00000477054 KRTAP10-5P60370 271 aa3.66□□□□□ -1.82
GSDMB-208ENST00000477054 KRTAP10-7P60409 375 aaPredicted RBP3.66□□□□□ -1.82
GSDMB-208ENST00000477054 LCE2BO14633 110 aa3.65□□□□□ -1.82
GSDMB-208ENST00000477054 FLGP20930 4061 aaPredicted RBP3.64□□□□□ -1.83
GSDMB-208ENST00000477054 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
GSDMB-208ENST00000477054 MUC17Q685J3 4493 aa3.63□□□□□ -1.83
GSDMB-208ENST00000477054 KRTAP9-3Q9BYQ3 159 aa3.6□□□□□ -1.83
GSDMB-208ENST00000477054 KRTAP19-4Q3LI73 84 aa3.59□□□□□ -1.83
GSDMB-208ENST00000477054 PCLOQ9Y6V0 5065 aa3.57□□□□□ -1.84
GSDMB-208ENST00000477054 MUC2Q02817 5179 aa3.49□□□□□ -1.85
GSDMB-208ENST00000477054 KRTAP4-8A0A0G2JLE6 195 aa3.43□□□□□ -1.86
GSDMB-208ENST00000477054 KRTAP4-8Q9BYQ9 185 aa3.43□□□□□ -1.86
GSDMB-208ENST00000477054 SPRR2FQ96RM1 72 aa3.41□□□□□ -1.86
GSDMB-208ENST00000477054 RNF213Q63HN8 5207 aa3.38□□□□□ -1.87
GSDMB-208ENST00000477054 FAT4Q6V0I7 4981 aa3.37□□□□□ -1.87
GSDMB-208ENST00000477054 HMCN2Q8NDA2 5059 aa3.37□□□□□ -1.87
GSDMB-208ENST00000477054 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
GSDMB-208ENST00000477054 MT1GP13640 62 aa3.29□□□□□ -1.88
GSDMB-208ENST00000477054 MT1LQ93083 61 aa3.28□□□□□ -1.88
GSDMB-208ENST00000477054 MT1EP04732 61 aa3.27□□□□□ -1.89
GSDMB-208ENST00000477054 KRTAP4-7Q9BYR0 210 aa3.24□□□□□ -1.89
GSDMB-208ENST00000477054 UBR4Q5T4S7 5183 aa3.21□□□□□ -1.9
GSDMB-208ENST00000477054 KRTAP19-6Q3LI70 58 aa3.2□□□□□ -1.9
GSDMB-208ENST00000477054 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
GSDMB-208ENST00000477054 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
GSDMB-208ENST00000477054 LCE3BQ5TA77 95 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 179.6 ms