RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 KRTAP10-8P60410 259 aa3.24□□□□□ -1.89
HDAC8-216ENST00000470998 TNXBP22105 4242 aa3.23□□□□□ -1.89
HDAC8-216ENST00000470998 LINC00304Q8N9R0 145 aa3.23□□□□□ -1.89
HDAC8-216ENST00000470998 UBR4Q5T4S7 5183 aa3.23□□□□□ -1.89
HDAC8-216ENST00000470998 MT3P25713 68 aa3.21□□□□□ -1.9
HDAC8-216ENST00000470998 Q1T7F1 81 aa3.21□□□□□ -1.9
HDAC8-216ENST00000470998 KRTAP13-3Q3SY46 172 aa3.21□□□□□ -1.9
HDAC8-216ENST00000470998 FP248Q71RG6 208 aaPredicted RBP3.2□□□□□ -1.9
HDAC8-216ENST00000470998 LRP2P98164 4655 aa3.18□□□□□ -1.9
HDAC8-216ENST00000470998 KRTAP16-1A8MUX0 517 aa3.18□□□□□ -1.9
HDAC8-216ENST00000470998 NOTCH2NLQ7Z3S9 236 aa3.18□□□□□ -1.9
HDAC8-216ENST00000470998 SEC61BP60468 96 aaKnown RBP3.17□□□□□ -1.9
HDAC8-216ENST00000470998 PCOTHQ58A44 107 aa3.17□□□□□ -1.9
HDAC8-216ENST00000470998 Q5W150 140 aa3.17□□□□□ -1.9
HDAC8-216ENST00000470998 COA5Q86WW8 74 aa3.17□□□□□ -1.9
HDAC8-216ENST00000470998 RNF213Q63HN8 5207 aa3.17□□□□□ -1.9
HDAC8-216ENST00000470998 ACYP2P14621 99 aa3.16□□□□□ -1.9
HDAC8-216ENST00000470998 C4orf26Q17RF5 130 aa3.16□□□□□ -1.9
HDAC8-216ENST00000470998 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
HDAC8-216ENST00000470998 A8MUN3 132 aa3.15□□□□□ -1.91
HDAC8-216ENST00000470998 PRR4Q16378 134 aa3.15□□□□□ -1.91
HDAC8-216ENST00000470998 C7orf65Q6ZTY9 151 aa3.15□□□□□ -1.91
HDAC8-216ENST00000470998 DMAC1Q96GE9 116 aa3.15□□□□□ -1.91
HDAC8-216ENST00000470998 C20orf166-AS1Q96NR2 134 aa3.14□□□□□ -1.91
HDAC8-216ENST00000470998 PRO0628Q9UI54 55 aa3.14□□□□□ -1.91
HDAC8-216ENST00000470998 A8MUU9 505 aa3.12□□□□□ -1.91
HDAC8-216ENST00000470998 HRES1P13985 223 aa3.12□□□□□ -1.91
HDAC8-216ENST00000470998 CHKB-CPT1BH3BT56 60 aa3.11□□□□□ -1.91
HDAC8-216ENST00000470998 LINC01558Q9Y6Z2 57 aa3.11□□□□□ -1.91
HDAC8-216ENST00000470998 Q75L30 129 aa3.1□□□□□ -1.91
HDAC8-216ENST00000470998 PRR15LQ9BU68 103 aa3.1□□□□□ -1.91
HDAC8-216ENST00000470998 SPTSSBQ8NFR3 76 aa3.09□□□□□ -1.91
HDAC8-216ENST00000470998 Q5VV11 94 aa3.07□□□□□ -1.92
HDAC8-216ENST00000470998 BRK1Q8WUW1 75 aa3.07□□□□□ -1.92
HDAC8-216ENST00000470998 LPAP08519 4548 aa3.06□□□□□ -1.92
HDAC8-216ENST00000470998 PSPHP1O15172 72 aa3.06□□□□□ -1.92
HDAC8-216ENST00000470998 KRTAP10-6P60371 365 aaPredicted RBP3.04□□□□□ -1.92
HDAC8-216ENST00000470998 TPRXLQ17RH7 258 aa3.04□□□□□ -1.92
HDAC8-216ENST00000470998 ATP11AUNQ6ZP68 121 aa3.03□□□□□ -1.92
HDAC8-216ENST00000470998 RETNLBQ9BQ08 111 aa3.03□□□□□ -1.92
HDAC8-216ENST00000470998 A0A1B0GU69 56 aa3.02□□□□□ -1.93
HDAC8-216ENST00000470998 A6NED7 52 aa3.02□□□□□ -1.93
HDAC8-216ENST00000470998 C9orf92A6NGG3 77 aa3.02□□□□□ -1.93
HDAC8-216ENST00000470998 RPL37P61927 97 aaKnown RBP3.02□□□□□ -1.93
HDAC8-216ENST00000470998 CDC42SE1Q9NRR8 79 aa3.02□□□□□ -1.93
HDAC8-216ENST00000470998 SPINK7P58062 85 aa3.01□□□□□ -1.93
HDAC8-216ENST00000470998 MUC17Q685J3 4493 aa3.01□□□□□ -1.93
HDAC8-216ENST00000470998 SEC61GP60059 68 aa3□□□□□ -1.93
HDAC8-216ENST00000470998 KRTAP10-7P60409 375 aaPredicted RBP3□□□□□ -1.93
HDAC8-216ENST00000470998 FAT4Q6V0I7 4981 aa2.99□□□□□ -1.93
HDAC8-216ENST00000470998 COX6B2Q6YFQ2 88 aa2.99□□□□□ -1.93
HDAC8-216ENST00000470998 UQCR11O14957 56 aa2.98□□□□□ -1.93
HDAC8-216ENST00000470998 MUC2Q02817 5179 aa2.98□□□□□ -1.93
HDAC8-216ENST00000470998 SPATA8Q6RVD6 105 aa2.94□□□□□ -1.94
HDAC8-216ENST00000470998 LCA10Q71F78 164 aa2.94□□□□□ -1.94
HDAC8-216ENST00000470998 MIR22HGQ0VDD5 57 aa2.92□□□□□ -1.94
HDAC8-216ENST00000470998 PMAIP1Q13794 54 aa2.92□□□□□ -1.94
HDAC8-216ENST00000470998 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
HDAC8-216ENST00000470998 RBM12B-AS1Q9P1G2 102 aa2.9□□□□□ -1.95
HDAC8-216ENST00000470998 KTN1-AS1Q86SY8 53 aa2.89□□□□□ -1.95
HDAC8-216ENST00000470998 S4R3F8 94 aa2.89□□□□□ -1.95
HDAC8-216ENST00000470998 A6NN06 94 aa2.88□□□□□ -1.95
HDAC8-216ENST00000470998 H1FX-AS1Q4G0G2 97 aa2.88□□□□□ -1.95
HDAC8-216ENST00000470998 A0A1B0GU33 70 aa2.86□□□□□ -1.95
HDAC8-216ENST00000470998 KRTAP4-1Q9BYQ7 146 aa2.86□□□□□ -1.95
HDAC8-216ENST00000470998 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
HDAC8-216ENST00000470998 A8MU10 97 aa2.85□□□□□ -1.95
HDAC8-216ENST00000470998 K7ERS5 55 aa2.85□□□□□ -1.95
HDAC8-216ENST00000470998 H0YAA0 97 aa2.83□□□□□ -1.96
HDAC8-216ENST00000470998 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
HDAC8-216ENST00000470998 CSAG1Q6PB30 78 aa2.82□□□□□ -1.96
HDAC8-216ENST00000470998 KRTAP19-2Q3LHN2 52 aa2.81□□□□□ -1.96
HDAC8-216ENST00000470998 PRAC1Q96KF2 57 aa2.81□□□□□ -1.96
HDAC8-216ENST00000470998 MT1HP80294 61 aa2.8□□□□□ -1.96
HDAC8-216ENST00000470998 M0QZ58 72 aa2.78□□□□□ -1.96
HDAC8-216ENST00000470998 CRCT1Q9UGL9 99 aa2.77□□□□□ -1.97
HDAC8-216ENST00000470998 KRTAP10-5P60370 271 aa2.76□□□□□ -1.97
HDAC8-216ENST00000470998 M0R2T5 61 aa2.75□□□□□ -1.97
HDAC8-216ENST00000470998 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
HDAC8-216ENST00000470998 FSIP2Q5CZC0 6907 aa2.75□□□□□ -1.97
HDAC8-216ENST00000470998 KRTAP10-12P60413 245 aa2.74□□□□□ -1.97
HDAC8-216ENST00000470998 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
HDAC8-216ENST00000470998 ADM2Q7Z4H4 148 aa2.73□□□□□ -1.97
HDAC8-216ENST00000470998 FLGP20930 4061 aaPredicted RBP2.72□□□□□ -1.97
HDAC8-216ENST00000470998 P0C880 135 aa2.7□□□□□ -1.98
HDAC8-216ENST00000470998 ROMO1P60602 79 aa2.68□□□□□ -1.98
HDAC8-216ENST00000470998 CRIPTQ9P021 101 aa2.68□□□□□ -1.98
HDAC8-216ENST00000470998 KRTAP13-4Q3LI77 160 aa2.67□□□□□ -1.98
HDAC8-216ENST00000470998 R4GN34 69 aa2.67□□□□□ -1.98
HDAC8-216ENST00000470998 A0A0D9SG42 100 aa2.64□□□□□ -1.99
HDAC8-216ENST00000470998 KRTAP12-1P59990 96 aa2.64□□□□□ -1.99
HDAC8-216ENST00000470998 KRTAP25-1Q3LHN0 102 aa2.64□□□□□ -1.99
HDAC8-216ENST00000470998 LINC01554Q52M75 96 aa2.64□□□□□ -1.99
HDAC8-216ENST00000470998 LCE3CQ5T5A8 94 aa2.62□□□□□ -1.99
HDAC8-216ENST00000470998 KRTAP12-2P59991 146 aa2.61□□□□□ -1.99
HDAC8-216ENST00000470998 SPINT4Q6UDR6 99 aa2.61□□□□□ -1.99
HDAC8-216ENST00000470998 USH2AO75445 5202 aa2.6□□□□□ -1.99
HDAC8-216ENST00000470998 SSPOA2VEC9 5147 aa2.59□□□□□ -1.99
HDAC8-216ENST00000470998 MT2AP02795 61 aa2.59□□□□□ -1.99
HDAC8-216ENST00000470998 MT1FP04733 61 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms