RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 LPAP08519 4548 aa0.26□□□□□ -2.37
CDC42BPA-211ENST00000466538 CEP290O15078 2479 aa0.25□□□□□ -2.37
CDC42BPA-211ENST00000466538 FAM186AA6NE01 2351 aa0.25□□□□□ -2.37
CDC42BPA-211ENST00000466538 A0A1B0GUL6 1792 aa0.25□□□□□ -2.37
CDC42BPA-211ENST00000466538 SPRR2BP35325 72 aa0.25□□□□□ -2.37
CDC42BPA-211ENST00000466538 SPTBN5Q9NRC6 3674 aaKnown RBP0.25□□□□□ -2.37
CDC42BPA-211ENST00000466538 DCHS2Q6V1P9 2916 aa0.25□□□□□ -2.37
CDC42BPA-211ENST00000466538 USP34Q70CQ2 3546 aa0.25□□□□□ -2.37
CDC42BPA-211ENST00000466538 CFAP54Q96N23 3096 aa0.24□□□□□ -2.37
CDC42BPA-211ENST00000466538 WFDC10BQ8IUB3 73 aa0.24□□□□□ -2.37
CDC42BPA-211ENST00000466538 KAAG1Q9UBP8 84 aa0.24□□□□□ -2.37
CDC42BPA-211ENST00000466538 LMO7Q8WWI1 1683 aa0.24□□□□□ -2.37
CDC42BPA-211ENST00000466538 ABCA5Q8WWZ7 1642 aa0.24□□□□□ -2.37
CDC42BPA-211ENST00000466538 MAP1AP78559 2803 aaPredicted RBP0.23□□□□□ -2.37
CDC42BPA-211ENST00000466538 LAMA1P25391 3075 aa0.23□□□□□ -2.37
CDC42BPA-211ENST00000466538 IGLV5-48A0A075B6I7 105 aa0.23□□□□□ -2.37
CDC42BPA-211ENST00000466538 FREM2Q5SZK8 3169 aa0.23□□□□□ -2.37
CDC42BPA-211ENST00000466538 IQGAP1P46940 1657 aa0.23□□□□□ -2.37
CDC42BPA-211ENST00000466538 DMXL2Q8TDJ6 3036 aa0.23□□□□□ -2.37
CDC42BPA-211ENST00000466538 ABCC8Q09428 1581 aa0.23□□□□□ -2.37
CDC42BPA-211ENST00000466538 EFCAB6Q5THR3 1501 aa0.23□□□□□ -2.37
CDC42BPA-211ENST00000466538 SRRM2Q9UQ35 2752 aaKnown RBP0.23□□□□□ -2.37
CDC42BPA-211ENST00000466538 UTRNP46939 3433 aa0.22□□□□□ -2.37
CDC42BPA-211ENST00000466538 SVEP1Q4LDE5 3571 aa0.22□□□□□ -2.37
CDC42BPA-211ENST00000466538 CENPEQ02224 2701 aa0.22□□□□□ -2.37
CDC42BPA-211ENST00000466538 MUC12Q9UKN1 5478 aa0.21□□□□□ -2.38
CDC42BPA-211ENST00000466538 LINC01546A6NGU7 62 aa0.21□□□□□ -2.38
CDC42BPA-211ENST00000466538 SMIM2Q9BVW6 85 aa0.21□□□□□ -2.38
CDC42BPA-211ENST00000466538 HTTP42858 3142 aa0.21□□□□□ -2.38
CDC42BPA-211ENST00000466538 LOC400499M0QZD8 3231 aa0.21□□□□□ -2.38
CDC42BPA-211ENST00000466538 MMP24-AS1A0A0U1RRL7 71 aa0.2□□□□□ -2.38
CDC42BPA-211ENST00000466538 TOMM5Q8N4H5 51 aa0.2□□□□□ -2.38
CDC42BPA-211ENST00000466538 TACC2O95359 2948 aa0.2□□□□□ -2.38
CDC42BPA-211ENST00000466538 WDFY3Q8IZQ1 3526 aa0.2□□□□□ -2.38
CDC42BPA-211ENST00000466538 LRP1BQ9NZR2 4599 aa0.2□□□□□ -2.38
CDC42BPA-211ENST00000466538 TFF3Q07654 80 aa0.19□□□□□ -2.38
CDC42BPA-211ENST00000466538 DMXL1Q9Y485 3027 aa0.19□□□□□ -2.38
CDC42BPA-211ENST00000466538 CUBNO60494 3623 aa0.19□□□□□ -2.38
CDC42BPA-211ENST00000466538 VPS13AQ96RL7 3174 aa0.18□□□□□ -2.38
CDC42BPA-211ENST00000466538 MYO15AQ9UKN7 3530 aa0.18□□□□□ -2.38
CDC42BPA-211ENST00000466538 CSMD2Q7Z408 3487 aa0.18□□□□□ -2.38
CDC42BPA-211ENST00000466538 LAMA5O15230 3695 aa0.18□□□□□ -2.38
CDC42BPA-211ENST00000466538 M0QY20 66 aa0.18□□□□□ -2.38
CDC42BPA-211ENST00000466538 SPRR2GQ9BYE4 73 aa0.18□□□□□ -2.38
CDC42BPA-211ENST00000466538 PKD1P98161 4303 aa0.18□□□□□ -2.38
CDC42BPA-211ENST00000466538 LYSTQ99698 3801 aa0.18□□□□□ -2.38
CDC42BPA-211ENST00000466538 ADGRG4Q8IZF6 3080 aa0.17□□□□□ -2.38
CDC42BPA-211ENST00000466538 FRYLO94915 3013 aa0.17□□□□□ -2.38
CDC42BPA-211ENST00000466538 MGAQ8IWI9 3026 aa0.17□□□□□ -2.38
CDC42BPA-211ENST00000466538 SPRR2AP35326 72 aa0.17□□□□□ -2.38
CDC42BPA-211ENST00000466538 DEFB131AP59861 70 aa0.17□□□□□ -2.38
CDC42BPA-211ENST00000466538 DNAH14Q0VDD8 3507 aa0.17□□□□□ -2.38
CDC42BPA-211ENST00000466538 DEFB110Q30KQ9 67 aa0.17□□□□□ -2.38
CDC42BPA-211ENST00000466538 KIF21BO75037 1637 aa0.16□□□□□ -2.38
CDC42BPA-211ENST00000466538 HSPG2P98160 4391 aa0.16□□□□□ -2.38
CDC42BPA-211ENST00000466538 FAT3Q8TDW7 4589 aa0.16□□□□□ -2.38
CDC42BPA-211ENST00000466538 A8MTW9 85 aa0.16□□□□□ -2.38
CDC42BPA-211ENST00000466538 TNP1P09430 55 aa0.16□□□□□ -2.38
CDC42BPA-211ENST00000466538 DDX60Q8IY21 1712 aaKnown RBP0.16□□□□□ -2.38
CDC42BPA-211ENST00000466538 CDH23Q9H251 3354 aa0.15□□□□□ -2.38
CDC42BPA-211ENST00000466538 NBPF19A0A087WUL8 3843 aa0.15□□□□□ -2.38
CDC42BPA-211ENST00000466538 XIRP2A4UGR9 3374 aa0.15□□□□□ -2.39
CDC42BPA-211ENST00000466538 NFAT5O94916 1531 aa0.14□□□□□ -2.39
CDC42BPA-211ENST00000466538 M0QZ58 72 aa0.14□□□□□ -2.39
CDC42BPA-211ENST00000466538 ACACAQ13085 2346 aa0.14□□□□□ -2.39
CDC42BPA-211ENST00000466538 GOLGB1Q14789 3259 aaKnown RBP0.14□□□□□ -2.39
CDC42BPA-211ENST00000466538 FRYQ5TBA9 3013 aa0.13□□□□□ -2.39
CDC42BPA-211ENST00000466538 HECTD4Q9Y4D8 3996 aa0.13□□□□□ -2.39
CDC42BPA-211ENST00000466538 SMG1Q96Q15 3661 aaKnown RBP0.12□□□□□ -2.39
CDC42BPA-211ENST00000466538 NDUFA1O15239 70 aa0.12□□□□□ -2.39
CDC42BPA-211ENST00000466538 KRTAP6-2Q3LI66 62 aa0.12□□□□□ -2.39
CDC42BPA-211ENST00000466538 SPENQ96T58 3664 aaKnown RBP0.12□□□□□ -2.39
CDC42BPA-211ENST00000466538 SACSQ9NZJ4 4579 aa0.12□□□□□ -2.39
CDC42BPA-211ENST00000466538 ATMQ13315 3056 aa0.12□□□□□ -2.39
CDC42BPA-211ENST00000466538 PRUNE2Q8WUY3 3088 aa0.12□□□□□ -2.39
CDC42BPA-211ENST00000466538 FAM208AQ9UK61 1670 aaKnown RBP0.11□□□□□ -2.39
CDC42BPA-211ENST00000466538 VPS13BQ7Z7G8 4022 aa0.11□□□□□ -2.39
CDC42BPA-211ENST00000466538 MT1AP04731 61 aa0.11□□□□□ -2.39
CDC42BPA-211ENST00000466538 CHD7Q9P2D1 2997 aa0.11□□□□□ -2.39
CDC42BPA-211ENST00000466538 LRP2P98164 4655 aa0.11□□□□□ -2.39
CDC42BPA-211ENST00000466538 IQGAP2Q13576 1575 aa0.11□□□□□ -2.39
CDC42BPA-211ENST00000466538 KRTAP19-6Q3LI70 58 aa0.1□□□□□ -2.39
CDC42BPA-211ENST00000466538 TRIOO75962 3097 aa0.1□□□□□ -2.39
CDC42BPA-211ENST00000466538 VPS13CQ709C8 3753 aa0.09□□□□□ -2.39
CDC42BPA-211ENST00000466538 SPRR2EP22531 72 aa0.09□□□□□ -2.4
CDC42BPA-211ENST00000466538 CLPSL2Q6UWE3 100 aa0.09□□□□□ -2.4
CDC42BPA-211ENST00000466538 PKHD1L1Q86WI1 4243 aa0.09□□□□□ -2.4
CDC42BPA-211ENST00000466538 PKHD1P08F94 4074 aa0.08□□□□□ -2.4
CDC42BPA-211ENST00000466538 ZZEF1O43149 2961 aa0.08□□□□□ -2.4
CDC42BPA-211ENST00000466538 SPART-AS1P0CW21 52 aa0.08□□□□□ -2.4
CDC42BPA-211ENST00000466538 ANK3Q12955 4377 aaKnown RBP0.08□□□□□ -2.4
CDC42BPA-211ENST00000466538 TRPM2O94759 1503 aa0.08□□□□□ -2.4
CDC42BPA-211ENST00000466538 MT4P47944 62 aa0.07□□□□□ -2.4
CDC42BPA-211ENST00000466538 STARD9Q9P2P6 4700 aa0.07□□□□□ -2.4
CDC42BPA-211ENST00000466538 FLGP20930 4061 aaPredicted RBP0.05□□□□□ -2.4
CDC42BPA-211ENST00000466538 POLR2KP53803 58 aaKnown RBP0.05□□□□□ -2.4
CDC42BPA-211ENST00000466538 SPRR2FQ96RM1 72 aa0.05□□□□□ -2.4
CDC42BPA-211ENST00000466538 DNAH9Q9NYC9 4486 aa0.05□□□□□ -2.4
CDC42BPA-211ENST00000466538 APOBP04114 4563 aaKnown RBP0.04□□□□□ -2.4
CDC42BPA-211ENST00000466538 DNAH11Q96DT5 4516 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms