RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 SMR3AQ99954 134 aa0.33□□□□□ -2.36
RPL39P28-201ENST00000465655 SPTAN1Q13813 2472 aaKnown RBP0.33□□□□□ -2.36
RPL39P28-201ENST00000465655 APCP25054 2843 aa0.33□□□□□ -2.36
RPL39P28-201ENST00000465655 CENPEQ02224 2701 aa0.33□□□□□ -2.36
RPL39P28-201ENST00000465655 TENM4Q6N022 2769 aa0.33□□□□□ -2.36
RPL39P28-201ENST00000465655 NBEAL2Q6ZNJ1 2754 aa0.33□□□□□ -2.36
RPL39P28-201ENST00000465655 DNHD1Q96M86 4753 aa0.33□□□□□ -2.36
RPL39P28-201ENST00000465655 PKD1L1Q8TDX9 2849 aa0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 MXRA5Q9NR99 2828 aa0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 ITPR3Q14573 2671 aa0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 SETD2Q9BYW2 2564 aaPredicted RBP0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 BDP1A6H8Y1 2624 aa0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 ZANQ9Y493 2812 aa0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP9-6A0A140TA67 174 aa0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP10-5P60370 271 aa0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP10-4P60372 401 aaPredicted RBP0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP6-3Q3LI67 103 aa0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 LCE3EQ5T5B0 92 aa0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 LCE1DQ5T752 114 aa0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 SETXQ7Z333 2677 aaKnown RBP0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 CFAP46Q8IYW2 2715 aa0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 NOTCH1P46531 2555 aa0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 STAB2Q8WWQ8 2551 aa0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 HYDINQ4G0P3 5121 aa0.32□□□□□ -2.36
RPL39P28-201ENST00000465655 GCN1Q92616 2671 aaKnown RBP0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 HIVEP1P15822 2718 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 CACNA1AO00555 2505 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 LRRK2Q5S007 2527 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 TLN1Q9Y490 2541 aaKnown RBP0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 USP9YO00507 2555 aaPredicted RBP0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 POLQO75417 2590 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 HERC2O95714 4834 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 UNC79Q9P2D8 2635 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 J3QKU1 62 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 PRM1P04553 51 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP12-3P60328 96 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP10-12P60413 245 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP9-4Q9BYQ2 154 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 MTORP42345 2549 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 ZFYVE26Q68DK2 2539 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 FBN3Q75N90 2809 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 ATRQ13535 2644 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 RYR3Q15413 4870 aa0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 HELZ2Q9BYK8 2649 aaKnown RBP0.31□□□□□ -2.36
RPL39P28-201ENST00000465655 TLN2Q9Y4G6 2542 aa0.3□□□□□ -2.36
RPL39P28-201ENST00000465655 TEP1Q99973 2627 aaKnown RBP0.3□□□□□ -2.36
RPL39P28-201ENST00000465655 BIRC6Q9NR09 4857 aa0.3□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP2-3P0C7H8 128 aa0.3□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP10-7P60409 375 aaPredicted RBP0.3□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP8-1Q8IUC2 63 aa0.3□□□□□ -2.36
RPL39P28-201ENST00000465655 LCE3DQ9BYE3 92 aa0.3□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP2-4Q9BYR9 128 aa0.3□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP2-1Q9BYU5 128 aa0.3□□□□□ -2.36
RPL39P28-201ENST00000465655 MYO9AB2RTY4 2548 aa0.3□□□□□ -2.36
RPL39P28-201ENST00000465655 KMT2CQ8NEZ4 4911 aaKnown RBP0.3□□□□□ -2.36
RPL39P28-201ENST00000465655 USP24Q9UPU5 2620 aa0.3□□□□□ -2.36
RPL39P28-201ENST00000465655 NBEAL1Q6ZS30 2694 aa0.3□□□□□ -2.36
RPL39P28-201ENST00000465655 NSD1Q96L73 2696 aaPredicted RBP0.3□□□□□ -2.36
RPL39P28-201ENST00000465655 TENM3Q9P273 2699 aa0.3□□□□□ -2.36
RPL39P28-201ENST00000465655 ACANP16112 2415 aa0.29□□□□□ -2.36
RPL39P28-201ENST00000465655 IGSF10Q6WRI0 2623 aa0.29□□□□□ -2.36
RPL39P28-201ENST00000465655 ITPR2Q14571 2701 aa0.29□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP9-7A8MTY7 169 aa0.29□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP19-1Q8IUB9 90 aa0.29□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP4-12Q9BQ66 201 aa0.29□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP9-9Q9BYP9 154 aa0.29□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP9-3Q9BYQ3 159 aa0.29□□□□□ -2.36
RPL39P28-201ENST00000465655 ANKRD11Q6UB99 2663 aaPredicted RBP0.29□□□□□ -2.36
RPL39P28-201ENST00000465655 FLNCQ14315 2725 aa0.29□□□□□ -2.36
RPL39P28-201ENST00000465655 RYR2Q92736 4967 aa0.28□□□□□ -2.36
RPL39P28-201ENST00000465655 RYR1P21817 5038 aa0.28□□□□□ -2.36
RPL39P28-201ENST00000465655 PCLOQ9Y6V0 5065 aa0.28□□□□□ -2.36
RPL39P28-201ENST00000465655 NOTCH2Q04721 2471 aa0.28□□□□□ -2.36
RPL39P28-201ENST00000465655 MGAM2Q2M2H8 2515 aa0.28□□□□□ -2.36
RPL39P28-201ENST00000465655 MYO18BQ8IUG5 2567 aa0.28□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP21-3Q3LHN1 58 aa0.28□□□□□ -2.36
RPL39P28-201ENST00000465655 LCE4AQ5TA78 99 aa0.28□□□□□ -2.36
RPL39P28-201ENST00000465655 CRCT1Q9UGL9 99 aa0.28□□□□□ -2.36
RPL39P28-201ENST00000465655 ACACBO00763 2458 aa0.28□□□□□ -2.36
RPL39P28-201ENST00000465655 STAB1Q9NY15 2570 aa0.28□□□□□ -2.37
RPL39P28-201ENST00000465655 MAST4O15021 2626 aa0.28□□□□□ -2.37
RPL39P28-201ENST00000465655 FLNAP21333 2647 aaKnown RBP0.28□□□□□ -2.37
RPL39P28-201ENST00000465655 SYNE1Q8NF91 8797 aaKnown RBP0.27□□□□□ -2.37
RPL39P28-201ENST00000465655 KRTAP19-5Q3LI72 72 aa0.27□□□□□ -2.37
RPL39P28-201ENST00000465655 KRTAP9-2Q9BYQ4 174 aa0.27□□□□□ -2.37
RPL39P28-201ENST00000465655 MUC2Q02817 5179 aa0.27□□□□□ -2.37
RPL39P28-201ENST00000465655 FASNP49327 2511 aaKnown RBP0.27□□□□□ -2.37
RPL39P28-201ENST00000465655 HMCN2Q8NDA2 5059 aa0.26□□□□□ -2.37
RPL39P28-201ENST00000465655 CEP295Q9C0D2 2601 aa0.26□□□□□ -2.37
RPL39P28-201ENST00000465655 LOC100996750A0A140TA64 210 aa0.26□□□□□ -2.37
RPL39P28-201ENST00000465655 KRTAP9-6A8MVA2 160 aa0.26□□□□□ -2.37
RPL39P28-201ENST00000465655 KRTAP6-2Q3LI66 62 aa0.26□□□□□ -2.37
RPL39P28-201ENST00000465655 LCE3BQ5TA77 95 aa0.26□□□□□ -2.37
RPL39P28-201ENST00000465655 KRTAP4-6Q9BYQ5 205 aa0.26□□□□□ -2.37
RPL39P28-201ENST00000465655 KRTAP4-8Q9BYQ9 185 aa0.26□□□□□ -2.37
RPL39P28-201ENST00000465655 KRTAP4-7Q9BYR0 210 aa0.26□□□□□ -2.37
RPL39P28-201ENST00000465655 TENM1Q9UKZ4 2725 aa0.26□□□□□ -2.37
RPL39P28-201ENST00000465655 UBR4Q5T4S7 5183 aa0.26□□□□□ -2.37
RPL39P28-201ENST00000465655 KRTAP5-5Q701N2 237 aaPredicted RBP0.25□□□□□ -2.37
RPL39P28-201ENST00000465655 KRTAP4-9Q9BYQ8 210 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms