RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 PKHD1L1Q86WI1 4243 aa3.99□□□□□ -1.77
SREBF2-204ENST00000462539 C9orf92A6NGG3 77 aa3.99□□□□□ -1.77
SREBF2-204ENST00000462539 KRTAP10-4P60372 401 aaPredicted RBP3.99□□□□□ -1.77
SREBF2-204ENST00000462539 VPS13BQ7Z7G8 4022 aa3.98□□□□□ -1.77
SREBF2-204ENST00000462539 KRTAP3-1Q9BYR8 98 aa3.97□□□□□ -1.77
SREBF2-204ENST00000462539 PCLOQ9Y6V0 5065 aa3.96□□□□□ -1.78
SREBF2-204ENST00000462539 A0A1B0GVY2 172 aa3.96□□□□□ -1.78
SREBF2-204ENST00000462539 H0YAA0 97 aa3.96□□□□□ -1.78
SREBF2-204ENST00000462539 SMR3BP02814 79 aaPredicted RBP3.96□□□□□ -1.78
SREBF2-204ENST00000462539 APOBP04114 4563 aaKnown RBP3.96□□□□□ -1.78
SREBF2-204ENST00000462539 DYNC1H1Q14204 4646 aaKnown RBP3.94□□□□□ -1.78
SREBF2-204ENST00000462539 RYR2Q92736 4967 aa3.94□□□□□ -1.78
SREBF2-204ENST00000462539 H1FX-AS1Q4G0G2 97 aa3.93□□□□□ -1.78
SREBF2-204ENST00000462539 PKHD1P08F94 4074 aa3.92□□□□□ -1.78
SREBF2-204ENST00000462539 LINC01554Q52M75 96 aa3.92□□□□□ -1.78
SREBF2-204ENST00000462539 A0A1B0GU33 70 aa3.91□□□□□ -1.78
SREBF2-204ENST00000462539 CSAG1Q6PB30 78 aa3.91□□□□□ -1.78
SREBF2-204ENST00000462539 COX6B2Q6YFQ2 88 aa3.91□□□□□ -1.78
SREBF2-204ENST00000462539 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
SREBF2-204ENST00000462539 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
SREBF2-204ENST00000462539 KRTAP19-1Q8IUB9 90 aa3.9□□□□□ -1.79
SREBF2-204ENST00000462539 KRTAP4-8A0A0G2JLE6 195 aa3.87□□□□□ -1.79
SREBF2-204ENST00000462539 HERC2O95714 4834 aa3.86□□□□□ -1.79
SREBF2-204ENST00000462539 SEC61BP60468 96 aaKnown RBP3.85□□□□□ -1.79
SREBF2-204ENST00000462539 RYR1P21817 5038 aa3.85□□□□□ -1.79
SREBF2-204ENST00000462539 FLG2Q5D862 2391 aaPredicted RBP3.84□□□□□ -1.79
SREBF2-204ENST00000462539 FAT1Q14517 4588 aa3.83□□□□□ -1.8
SREBF2-204ENST00000462539 TNXBP22105 4242 aa3.82□□□□□ -1.8
SREBF2-204ENST00000462539 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
SREBF2-204ENST00000462539 KRTAP25-1Q3LHN0 102 aa3.82□□□□□ -1.8
SREBF2-204ENST00000462539 KRTAP10-8P60410 259 aa3.81□□□□□ -1.8
SREBF2-204ENST00000462539 FAT3Q8TDW7 4589 aa3.81□□□□□ -1.8
SREBF2-204ENST00000462539 K7ERS5 55 aa3.79□□□□□ -1.8
SREBF2-204ENST00000462539 KRTAP10-6P60371 365 aaPredicted RBP3.79□□□□□ -1.8
SREBF2-204ENST00000462539 HSPG2P98160 4391 aa3.78□□□□□ -1.8
SREBF2-204ENST00000462539 S4R3F8 94 aa3.78□□□□□ -1.8
SREBF2-204ENST00000462539 KRTAP4-5Q9BYR2 181 aa3.77□□□□□ -1.81
SREBF2-204ENST00000462539 KRTAP13-4Q3LI77 160 aa3.76□□□□□ -1.81
SREBF2-204ENST00000462539 Q5VSD8 79 aa3.76□□□□□ -1.81
SREBF2-204ENST00000462539 KRTAP19-4Q3LI73 84 aa3.75□□□□□ -1.81
SREBF2-204ENST00000462539 LRP1Q07954 4544 aaKnown RBP3.74□□□□□ -1.81
SREBF2-204ENST00000462539 ROMO1P60602 79 aa3.74□□□□□ -1.81
SREBF2-204ENST00000462539 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
SREBF2-204ENST00000462539 KRTAP4-7Q9BYR0 210 aa3.74□□□□□ -1.81
SREBF2-204ENST00000462539 KIAA1109Q2LD37 5005 aa3.71□□□□□ -1.82
SREBF2-204ENST00000462539 A0A0D9SG42 100 aa3.7□□□□□ -1.82
SREBF2-204ENST00000462539 CRIPTQ9P021 101 aa3.7□□□□□ -1.82
SREBF2-204ENST00000462539 P0C880 135 aa3.69□□□□□ -1.82
SREBF2-204ENST00000462539 MT1HL1P0DM35 61 aa3.69□□□□□ -1.82
SREBF2-204ENST00000462539 UBR4Q5T4S7 5183 aa3.69□□□□□ -1.82
SREBF2-204ENST00000462539 ABCA13Q86UQ4 5058 aa3.67□□□□□ -1.82
SREBF2-204ENST00000462539 TPRXLQ17RH7 258 aa3.65□□□□□ -1.83
SREBF2-204ENST00000462539 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.83
SREBF2-204ENST00000462539 KRTAP12-1P59990 96 aa3.63□□□□□ -1.83
SREBF2-204ENST00000462539 KRTAP12-2P59991 146 aa3.63□□□□□ -1.83
SREBF2-204ENST00000462539 DMBT1Q9UGM3 2413 aaPredicted RBP3.61□□□□□ -1.83
SREBF2-204ENST00000462539 C10orf95Q9H7T3 257 aa3.6□□□□□ -1.83
SREBF2-204ENST00000462539 HERC1Q15751 4861 aa3.6□□□□□ -1.83
SREBF2-204ENST00000462539 MYCBP2O75592 4640 aa3.59□□□□□ -1.83
SREBF2-204ENST00000462539 M0QZ58 72 aa3.58□□□□□ -1.84
SREBF2-204ENST00000462539 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
SREBF2-204ENST00000462539 SPINT4Q6UDR6 99 aa3.56□□□□□ -1.84
SREBF2-204ENST00000462539 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
SREBF2-204ENST00000462539 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
SREBF2-204ENST00000462539 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
SREBF2-204ENST00000462539 LRP2P98164 4655 aa3.46□□□□□ -1.86
SREBF2-204ENST00000462539 R4GN34 69 aa3.45□□□□□ -1.86
SREBF2-204ENST00000462539 KRTAP4-1Q9BYQ7 146 aa3.44□□□□□ -1.86
SREBF2-204ENST00000462539 MUC17Q685J3 4493 aa3.44□□□□□ -1.86
SREBF2-204ENST00000462539 LPAP08519 4548 aa3.43□□□□□ -1.86
SREBF2-204ENST00000462539 KRTAP19-2Q3LHN2 52 aa3.41□□□□□ -1.86
SREBF2-204ENST00000462539 KRTAP9-7A8MTY7 169 aa3.4□□□□□ -1.87
SREBF2-204ENST00000462539 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.87
SREBF2-204ENST00000462539 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
SREBF2-204ENST00000462539 HMCN2Q8NDA2 5059 aa3.31□□□□□ -1.88
SREBF2-204ENST00000462539 KRTAP9-3Q9BYQ3 159 aa3.31□□□□□ -1.88
SREBF2-204ENST00000462539 RNF213Q63HN8 5207 aa3.3□□□□□ -1.88
SREBF2-204ENST00000462539 PP632Q6XCG6 107 aa3.3□□□□□ -1.88
SREBF2-204ENST00000462539 PLAC4Q8WY50 150 aa3.3□□□□□ -1.88
SREBF2-204ENST00000462539 CAMK2N1Q7Z7J9 78 aa3.28□□□□□ -1.88
SREBF2-204ENST00000462539 CRCT1Q9UGL9 99 aa3.27□□□□□ -1.89
SREBF2-204ENST00000462539 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
SREBF2-204ENST00000462539 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
SREBF2-204ENST00000462539 TNP1P09430 55 aa3.19□□□□□ -1.9
SREBF2-204ENST00000462539 MUC2Q02817 5179 aa3.17□□□□□ -1.9
SREBF2-204ENST00000462539 SPRR2GQ9BYE4 73 aa3.14□□□□□ -1.91
SREBF2-204ENST00000462539 FSIP2Q5CZC0 6907 aa3.14□□□□□ -1.91
SREBF2-204ENST00000462539 FAT4Q6V0I7 4981 aa3.13□□□□□ -1.91
SREBF2-204ENST00000462539 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
SREBF2-204ENST00000462539 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
SREBF2-204ENST00000462539 KRTAP9-8Q9BYQ0 159 aa3.13□□□□□ -1.91
SREBF2-204ENST00000462539 MT1HP80294 61 aa3.07□□□□□ -1.92
SREBF2-204ENST00000462539 MT2AP02795 61 aa3.05□□□□□ -1.92
SREBF2-204ENST00000462539 MT1FP04733 61 aa3.05□□□□□ -1.92
SREBF2-204ENST00000462539 LCE3AQ5TA76 89 aa3.04□□□□□ -1.92
SREBF2-204ENST00000462539 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
SREBF2-204ENST00000462539 M0R2T5 61 aa3.02□□□□□ -1.93
SREBF2-204ENST00000462539 KRTAP10-10P60014 251 aa3□□□□□ -1.93
SREBF2-204ENST00000462539 MT1BP07438 61 aa2.98□□□□□ -1.93
SREBF2-204ENST00000462539 KRTAP8-1Q8IUC2 63 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms