RNA–Protein interactions for RNA: ENST00000455531.1

MEG3-213, Transcript of maternally expressed 3, humanhuman

TSL 2 BASIC

Gene MEG3, Length 4,867 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-213ENST00000455531 STARD9Q9P2P6 4700 aa6.41□□□□□ -1.38
MEG3-213ENST00000455531 DNAH1Q9P2D7 4330 aa6.4□□□□□ -1.38
MEG3-213ENST00000455531 DNHD1Q96M86 4753 aa6.4□□□□□ -1.38
MEG3-213ENST00000455531 VPS13DQ5THJ4 4388 aa6.37□□□□□ -1.39
MEG3-213ENST00000455531 ALMS1Q8TCU4 4167 aa6.34□□□□□ -1.4
MEG3-213ENST00000455531 LYSTQ99698 3801 aa6.32□□□□□ -1.4
MEG3-213ENST00000455531 KMT2AQ03164 3969 aa6.27□□□□□ -1.41
MEG3-213ENST00000455531 DNAH11Q96DT5 4516 aa6.26□□□□□ -1.41
MEG3-213ENST00000455531 DNAH17Q9UFH2 4485 aa6.23□□□□□ -1.41
MEG3-213ENST00000455531 DNAH7Q8WXX0 4024 aa6.22□□□□□ -1.41
MEG3-213ENST00000455531 DYNC2H1Q8NCM8 4307 aaKnown RBP6.19□□□□□ -1.42
MEG3-213ENST00000455531 DNAH5Q8TE73 4624 aa6.16□□□□□ -1.42
MEG3-213ENST00000455531 DNAH2Q9P225 4427 aa6.15□□□□□ -1.42
MEG3-213ENST00000455531 KRTAP10-4P60372 401 aaPredicted RBP6.14□□□□□ -1.43
MEG3-213ENST00000455531 INE1O15225 51 aa6.1□□□□□ -1.43
MEG3-213ENST00000455531 DNAH8Q96JB1 4490 aa6.09□□□□□ -1.44
MEG3-213ENST00000455531 LRP1BQ9NZR2 4599 aa6.08□□□□□ -1.44
MEG3-213ENST00000455531 HECTD4Q9Y4D8 3996 aa6.05□□□□□ -1.44
MEG3-213ENST00000455531 DYNC1H1Q14204 4646 aaKnown RBP6.03□□□□□ -1.44
MEG3-213ENST00000455531 DNAH6Q9C0G6 4158 aa6.02□□□□□ -1.45
MEG3-213ENST00000455531 FAT1Q14517 4588 aa6.01□□□□□ -1.45
MEG3-213ENST00000455531 FRAS1Q86XX4 4008 aa6□□□□□ -1.45
MEG3-213ENST00000455531 HYDINQ4G0P3 5121 aa5.96□□□□□ -1.45
MEG3-213ENST00000455531 MT1HL1P0DM35 61 aa5.96□□□□□ -1.46
MEG3-213ENST00000455531 VPS13BQ7Z7G8 4022 aa5.95□□□□□ -1.46
MEG3-213ENST00000455531 LORP23490 312 aaPredicted RBP5.94□□□□□ -1.46
MEG3-213ENST00000455531 SACSQ9NZJ4 4579 aa5.9□□□□□ -1.46
MEG3-213ENST00000455531 FAT2Q9NYQ8 4349 aa5.9□□□□□ -1.47
MEG3-213ENST00000455531 KRTAP4-5Q9BYR2 181 aa5.88□□□□□ -1.47
MEG3-213ENST00000455531 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
MEG3-213ENST00000455531 PKHD1P08F94 4074 aa5.83□□□□□ -1.48
MEG3-213ENST00000455531 KRTAP10-12P60413 245 aa5.82□□□□□ -1.48
MEG3-213ENST00000455531 RYR2Q92736 4967 aa5.78□□□□□ -1.48
MEG3-213ENST00000455531 APOBP04114 4563 aaKnown RBP5.77□□□□□ -1.49
MEG3-213ENST00000455531 CRCT1Q9UGL9 99 aa5.76□□□□□ -1.49
MEG3-213ENST00000455531 PKD1P98161 4303 aa5.76□□□□□ -1.49
MEG3-213ENST00000455531 KIAA1109Q2LD37 5005 aa5.75□□□□□ -1.49
MEG3-213ENST00000455531 RYR3Q15413 4870 aa5.71□□□□□ -1.5
MEG3-213ENST00000455531 KMT2CQ8NEZ4 4911 aaKnown RBP5.71□□□□□ -1.5
MEG3-213ENST00000455531 RYR1P21817 5038 aa5.7□□□□□ -1.5
MEG3-213ENST00000455531 KRTAP17-1Q9BYP8 105 aa5.7□□□□□ -1.5
MEG3-213ENST00000455531 LRP1Q07954 4544 aaKnown RBP5.7□□□□□ -1.5
MEG3-213ENST00000455531 LCE3AQ5TA76 89 aa5.69□□□□□ -1.5
MEG3-213ENST00000455531 MYCBP2O75592 4640 aa5.64□□□□□ -1.51
MEG3-213ENST00000455531 KRTAP12-3P60328 96 aa5.61□□□□□ -1.51
MEG3-213ENST00000455531 HSPG2P98160 4391 aa5.56□□□□□ -1.52
MEG3-213ENST00000455531 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
MEG3-213ENST00000455531 FAT3Q8TDW7 4589 aa5.51□□□□□ -1.53
MEG3-213ENST00000455531 KRTAP4-1Q9BYQ7 146 aa5.43□□□□□ -1.54
MEG3-213ENST00000455531 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
MEG3-213ENST00000455531 PKHD1L1Q86WI1 4243 aa5.38□□□□□ -1.55
MEG3-213ENST00000455531 EPPK1P58107 5090 aaKnown RBP5.38□□□□□ -1.55
MEG3-213ENST00000455531 HERC2O95714 4834 aa5.36□□□□□ -1.55
MEG3-213ENST00000455531 TNXBP22105 4242 aa5.36□□□□□ -1.55
MEG3-213ENST00000455531 LRP2P98164 4655 aa5.36□□□□□ -1.55
MEG3-213ENST00000455531 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
MEG3-213ENST00000455531 LPAP08519 4548 aa5.25□□□□□ -1.57
MEG3-213ENST00000455531 BIRC6Q9NR09 4857 aa5.24□□□□□ -1.57
MEG3-213ENST00000455531 MT1HP80294 61 aa5.21□□□□□ -1.58
MEG3-213ENST00000455531 SPRR2GQ9BYE4 73 aa5.2□□□□□ -1.58
MEG3-213ENST00000455531 ABCA13Q86UQ4 5058 aa5.2□□□□□ -1.58
MEG3-213ENST00000455531 KRTAP10-7P60409 375 aaPredicted RBP5.19□□□□□ -1.58
MEG3-213ENST00000455531 SPRR2FQ96RM1 72 aa5.17□□□□□ -1.58
MEG3-213ENST00000455531 MT2AP02795 61 aa5.14□□□□□ -1.59
MEG3-213ENST00000455531 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
MEG3-213ENST00000455531 KRTAP19-4Q3LI73 84 aa5.04□□□□□ -1.6
MEG3-213ENST00000455531 HERC1Q15751 4861 aa5□□□□□ -1.61
MEG3-213ENST00000455531 KRTAP19-1Q8IUB9 90 aa4.99□□□□□ -1.61
MEG3-213ENST00000455531 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
MEG3-213ENST00000455531 MT1FP04733 61 aa4.97□□□□□ -1.61
MEG3-213ENST00000455531 KRTAP19-2Q3LHN2 52 aa4.95□□□□□ -1.62
MEG3-213ENST00000455531 LCE2CQ5TA81 110 aa4.91□□□□□ -1.62
MEG3-213ENST00000455531 PCLOQ9Y6V0 5065 aa4.9□□□□□ -1.62
MEG3-213ENST00000455531 SPRR2EP22531 72 aa4.89□□□□□ -1.63
MEG3-213ENST00000455531 SPRR2BP35325 72 aa4.89□□□□□ -1.63
MEG3-213ENST00000455531 SPRR2AP35326 72 aa4.89□□□□□ -1.63
MEG3-213ENST00000455531 MUC2Q02817 5179 aa4.84□□□□□ -1.63
MEG3-213ENST00000455531 MT1XP80297 61 aa4.82□□□□□ -1.64
MEG3-213ENST00000455531 FLGP20930 4061 aaPredicted RBP4.82□□□□□ -1.64
MEG3-213ENST00000455531 MUC17Q685J3 4493 aa4.81□□□□□ -1.64
MEG3-213ENST00000455531 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
MEG3-213ENST00000455531 HMCN2Q8NDA2 5059 aa4.78□□□□□ -1.64
MEG3-213ENST00000455531 SPRR2DP22532 72 aa4.75□□□□□ -1.65
MEG3-213ENST00000455531 KRTAP9-8Q9BYQ0 159 aa4.75□□□□□ -1.65
MEG3-213ENST00000455531 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
MEG3-213ENST00000455531 RNF213Q63HN8 5207 aa4.72□□□□□ -1.65
MEG3-213ENST00000455531 LCE2BO14633 110 aa4.71□□□□□ -1.65
MEG3-213ENST00000455531 MT1BP07438 61 aa4.7□□□□□ -1.66
MEG3-213ENST00000455531 FAT4Q6V0I7 4981 aa4.69□□□□□ -1.66
MEG3-213ENST00000455531 UBR4Q5T4S7 5183 aa4.68□□□□□ -1.66
MEG3-213ENST00000455531 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
MEG3-213ENST00000455531 KRTAP9-3Q9BYQ3 159 aa4.58□□□□□ -1.68
MEG3-213ENST00000455531 MT1GP13640 62 aa4.57□□□□□ -1.68
MEG3-213ENST00000455531 KRTAP4-8A0A0G2JLE6 195 aa4.56□□□□□ -1.68
MEG3-213ENST00000455531 KRTAP4-8Q9BYQ9 185 aa4.56□□□□□ -1.68
MEG3-213ENST00000455531 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
MEG3-213ENST00000455531 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
MEG3-213ENST00000455531 LCE2DQ5TA82 110 aaPredicted RBP4.4□□□□□ -1.71
MEG3-213ENST00000455531 LCE2AQ5TA79 106 aaPredicted RBP4.37□□□□□ -1.71
MEG3-213ENST00000455531 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms