RNA–Protein interactions for RNA: ENST00000455531.1

MEG3-213, Transcript of maternally expressed 3, humanhuman

TSL 2 BASIC

Gene MEG3, Length 4,867 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-213ENST00000455531 NISCHQ9Y2I1 1504 aa23.12■■□□□ 1.29
MEG3-213ENST00000455531 DCAF8L2P0C7V8 631 aa22.58■■□□□ 1.2
MEG3-213ENST00000455531 PELP1Q8IZL8 1130 aaKnown RBP22.01■■□□□ 1.11
MEG3-213ENST00000455531 SUPT5HO00267 1087 aaKnown RBP21.85■■□□□ 1.09
MEG3-213ENST00000455531 PCGF6Q9BYE7 350 aa21.69■■□□□ 1.06
MEG3-213ENST00000455531 MYT1Q01538 1121 aa21.55■■□□□ 1.04
MEG3-213ENST00000455531 HRCP23327 699 aa21.46■■□□□ 1.03
MEG3-213ENST00000455531 SHROOM4Q9ULL8 1493 aa21.36■■□□□ 1.01
MEG3-213ENST00000455531 PPARGC1BQ86YN6 1023 aaKnown RBP21.08■□□□□ 0.97
MEG3-213ENST00000455531 CENPBP07199 599 aaPredicted RBP21.04■□□□□ 0.96
MEG3-213ENST00000455531 ZEB1P37275 1124 aaPredicted RBP21.03■□□□□ 0.96
MEG3-213ENST00000455531 EHMT2Q96KQ7 1210 aa20.83■□□□□ 0.93
MEG3-213ENST00000455531 FAM9AQ8IZU1 332 aaPredicted RBP20.72■□□□□ 0.91
MEG3-213ENST00000455531 TRIM26Q12899 539 aaPredicted RBP20.63■□□□□ 0.89
MEG3-213ENST00000455531 CCER1Q8TC90 406 aaPredicted RBP20.55■□□□□ 0.88
MEG3-213ENST00000455531 YTHDC1Q96MU7 727 aaKnown RBP20.53■□□□□ 0.88
MEG3-213ENST00000455531 APLP2Q06481 763 aa20.42■□□□□ 0.86
MEG3-213ENST00000455531 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
MEG3-213ENST00000455531 TTBK1Q5TCY1 1321 aaPredicted RBP20.32■□□□□ 0.84
MEG3-213ENST00000455531 GTF3C3Q9Y5Q9 886 aa20.31■□□□□ 0.84
MEG3-213ENST00000455531 LOC105371045A0A1W2PR82 267 aa20.31■□□□□ 0.84
MEG3-213ENST00000455531 ERICH6Q7L0X2 663 aa20.27■□□□□ 0.84
MEG3-213ENST00000455531 SCAF1Q9H7N4 1312 aaKnown RBP20.2■□□□□ 0.82
MEG3-213ENST00000455531 ACIN1Q9UKV3 1341 aaKnown RBP20.16■□□□□ 0.82
MEG3-213ENST00000455531 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
MEG3-213ENST00000455531 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
MEG3-213ENST00000455531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.93■□□□□ 0.78
MEG3-213ENST00000455531 NEFLP07196 543 aa19.9■□□□□ 0.78
MEG3-213ENST00000455531 NEUROD1Q13562 356 aa19.87■□□□□ 0.77
MEG3-213ENST00000455531 ATP1B4Q9UN42 357 aaPredicted RBP19.67■□□□□ 0.74
MEG3-213ENST00000455531 DCAF1Q9Y4B6 1507 aa19.59■□□□□ 0.73
MEG3-213ENST00000455531 RANGAP1P46060 587 aaPredicted RBP19.55■□□□□ 0.72
MEG3-213ENST00000455531 ZNF316A6NFI3 1004 aaPredicted RBP19.52■□□□□ 0.71
MEG3-213ENST00000455531 UBTFP17480 764 aaKnown RBP19.51■□□□□ 0.71
MEG3-213ENST00000455531 BCANQ96GW7 911 aa19.5■□□□□ 0.71
MEG3-213ENST00000455531 CCDC180Q9P1Z9 1646 aa19.46■□□□□ 0.71
MEG3-213ENST00000455531 HNRNPUL2Q1KMD3 747 aaKnown RBP19.44■□□□□ 0.7
MEG3-213ENST00000455531 MYO15BQ96JP2 1530 aa19.43■□□□□ 0.7
MEG3-213ENST00000455531 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
MEG3-213ENST00000455531 MYT1LQ9UL68 1186 aa19.33■□□□□ 0.69
MEG3-213ENST00000455531 BCL11AQ9H165 835 aa19.29■□□□□ 0.68
MEG3-213ENST00000455531 ANP32EQ9BTT0 268 aa19.28■□□□□ 0.68
MEG3-213ENST00000455531 RTL5Q5HYW3 569 aaPredicted RBP19.26■□□□□ 0.67
MEG3-213ENST00000455531 CLSPNQ9HAW4 1339 aa19.22■□□□□ 0.67
MEG3-213ENST00000455531 ABCC9O60706 1549 aa19.2■□□□□ 0.66
MEG3-213ENST00000455531 MIER1Q8N108 512 aa19.14■□□□□ 0.65
MEG3-213ENST00000455531 CDK11AQ9UQ88 783 aaPredicted RBP19.12■□□□□ 0.65
MEG3-213ENST00000455531 FKBP8Q14318 412 aa19.07■□□□□ 0.64
MEG3-213ENST00000455531 ITGAEP38570 1179 aa19.03■□□□□ 0.64
MEG3-213ENST00000455531 DAXXQ9UER7 740 aaPredicted RBP18.98■□□□□ 0.63
MEG3-213ENST00000455531 EIF5BO60841 1220 aaKnown RBP18.86■□□□□ 0.61
MEG3-213ENST00000455531 SUPT16HQ9Y5B9 1047 aaKnown RBP18.85■□□□□ 0.61
MEG3-213ENST00000455531 CSRNP3Q8WYN3 585 aa18.84■□□□□ 0.61
MEG3-213ENST00000455531 ANP32CO43423 234 aa18.83■□□□□ 0.6
MEG3-213ENST00000455531 NBR1Q14596 966 aa18.78■□□□□ 0.6
MEG3-213ENST00000455531 SCRIBQ14160 1630 aa18.73■□□□□ 0.59
MEG3-213ENST00000455531 ANP32AP39687 249 aaKnown RBP18.72■□□□□ 0.59
MEG3-213ENST00000455531 CNGB1Q14028 1251 aaPredicted RBP18.72■□□□□ 0.59
MEG3-213ENST00000455531 POLR3GLQ9BT43 218 aa18.69■□□□□ 0.58
MEG3-213ENST00000455531 TSHZ2Q9NRE2 1034 aa18.69■□□□□ 0.58
MEG3-213ENST00000455531 TRIM52Q96A61 297 aa18.65■□□□□ 0.58
MEG3-213ENST00000455531 SLC4A1APQ9BWU0 796 aaKnown RBP18.63■□□□□ 0.57
MEG3-213ENST00000455531 DDX10Q13206 875 aaKnown RBP18.6■□□□□ 0.57
MEG3-213ENST00000455531 PABPN1Q86U42 306 aaKnown RBP eCLIP18.6■□□□□ 0.57
MEG3-213ENST00000455531 RBM19Q9Y4C8 960 aaKnown RBP18.58■□□□□ 0.56
MEG3-213ENST00000455531 NPM2Q86SE8 214 aaKnown RBP18.56■□□□□ 0.56
MEG3-213ENST00000455531 IRX6P78412 446 aaPredicted RBP18.54■□□□□ 0.56
MEG3-213ENST00000455531 HNRNPUQ00839 825 aaKnown RBP eCLIP18.53■□□□□ 0.561e-10■■■■□ 22.7
MEG3-213ENST00000455531 ZBTB47Q9UFB7 747 aaPredicted RBP18.52■□□□□ 0.56
MEG3-213ENST00000455531 DEKP35659 375 aaKnown RBP18.5■□□□□ 0.55
MEG3-213ENST00000455531 GLIPR1L2Q4G1C9 344 aa18.48■□□□□ 0.55
MEG3-213ENST00000455531 RTN4Q9NQC3 1192 aaKnown RBP18.47■□□□□ 0.55
MEG3-213ENST00000455531 FAM50AQ14320 339 aaKnown RBP18.44■□□□□ 0.54
MEG3-213ENST00000455531 NACADO15069 1562 aa18.43■□□□□ 0.54
MEG3-213ENST00000455531 FBLN2P98095 1184 aa18.39■□□□□ 0.53
MEG3-213ENST00000455531 RB1CC1Q8TDY2 1594 aa18.35■□□□□ 0.53
MEG3-213ENST00000455531 CCDC136Q96JN2 1154 aa18.31■□□□□ 0.52
MEG3-213ENST00000455531 NOP58Q9Y2X3 529 aaKnown RBP18.31■□□□□ 0.52
MEG3-213ENST00000455531 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
MEG3-213ENST00000455531 FAM9BQ8IZU0 186 aa18.28■□□□□ 0.52
MEG3-213ENST00000455531 PRKCSHP14314 528 aaPredicted RBP18.27■□□□□ 0.52
MEG3-213ENST00000455531 HIRIP3Q9BW71 556 aaPredicted RBP18.27■□□□□ 0.52
MEG3-213ENST00000455531 ESF1Q9H501 851 aaKnown RBP18.24■□□□□ 0.51
MEG3-213ENST00000455531 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.21■□□□□ 0.51
MEG3-213ENST00000455531 NEFMP07197 916 aa18.18■□□□□ 0.5
MEG3-213ENST00000455531 CEP162Q5TB80 1403 aa18.18■□□□□ 0.5
MEG3-213ENST00000455531 PPP4R2Q9NY27 417 aa18.17■□□□□ 0.5
MEG3-213ENST00000455531 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.49
MEG3-213ENST00000455531 LAS1LQ9Y4W2 734 aaKnown RBP18.12■□□□□ 0.49
MEG3-213ENST00000455531 NPM1P06748 294 aaKnown RBP eCLIP18.11■□□□□ 0.49
MEG3-213ENST00000455531 B4GALNT3Q6L9W6 998 aa18.11■□□□□ 0.49
MEG3-213ENST00000455531 TONSLQ96HA7 1378 aa18.11■□□□□ 0.49
MEG3-213ENST00000455531 MRS2Q9HD23 443 aa18.09■□□□□ 0.49
MEG3-213ENST00000455531 ERICH6BQ5W0A0 696 aa18.08■□□□□ 0.48
MEG3-213ENST00000455531 ARXQ96QS3 562 aa18.07■□□□□ 0.48
MEG3-213ENST00000455531 SLC24A1O60721 1099 aa18.06■□□□□ 0.48
MEG3-213ENST00000455531 PPM1GO15355 546 aaPredicted RBP18.06■□□□□ 0.48
MEG3-213ENST00000455531 ZNF326Q5BKZ1 582 aaKnown RBP18.01■□□□□ 0.47
MEG3-213ENST00000455531 ANO8Q9HCE9 1232 aaPredicted RBP18■□□□□ 0.47
MEG3-213ENST00000455531 KCNH8Q96L42 1107 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms