RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 KRTAP10-8P60410 259 aa8.89□□□□□ -0.99
TCF3-204ENST00000453954 SACSQ9NZJ4 4579 aa8.86□□□□□ -0.99
TCF3-204ENST00000453954 RPS29P62273 56 aaKnown RBP8.85□□□□□ -0.99
TCF3-204ENST00000453954 KRTAP10-6P60371 365 aaPredicted RBP8.85□□□□□ -0.99
TCF3-204ENST00000453954 DYNC1H1Q14204 4646 aaKnown RBP8.83□□□□□ -1
TCF3-204ENST00000453954 KRTAP12-2P59991 146 aa8.81□□□□□ -1
TCF3-204ENST00000453954 LRP1Q07954 4544 aaKnown RBP8.78□□□□□ -1
TCF3-204ENST00000453954 Q5VSD8 79 aa8.77□□□□□ -1.01
TCF3-204ENST00000453954 KRTAP3-3Q9BYR6 98 aa8.74□□□□□ -1.01
TCF3-204ENST00000453954 KMT2CQ8NEZ4 4911 aaKnown RBP8.73□□□□□ -1.01
TCF3-204ENST00000453954 KRTAP3-2Q9BYR7 98 aa8.7□□□□□ -1.02
TCF3-204ENST00000453954 XP32Q5T750 250 aa8.69□□□□□ -1.02
TCF3-204ENST00000453954 M0QZ58 72 aa8.68□□□□□ -1.02
TCF3-204ENST00000453954 FAT3Q8TDW7 4589 aa8.67□□□□□ -1.02
TCF3-204ENST00000453954 APOBP04114 4563 aaKnown RBP8.64□□□□□ -1.03
TCF3-204ENST00000453954 R4GN34 69 aa8.61□□□□□ -1.03
TCF3-204ENST00000453954 KRTAP12-1P59990 96 aa8.58□□□□□ -1.04
TCF3-204ENST00000453954 HSPG2P98160 4391 aa8.57□□□□□ -1.04
TCF3-204ENST00000453954 KRTAP10-4P60372 401 aaPredicted RBP8.55□□□□□ -1.04
TCF3-204ENST00000453954 RYR2Q92736 4967 aa8.54□□□□□ -1.04
TCF3-204ENST00000453954 A0A1B0GVY2 172 aa8.47□□□□□ -1.05
TCF3-204ENST00000453954 KRTAP15-1Q3LI76 137 aa8.47□□□□□ -1.05
TCF3-204ENST00000453954 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
TCF3-204ENST00000453954 KRTAP21-3Q3LHN1 58 aa8.41□□□□□ -1.06
TCF3-204ENST00000453954 RYR3Q15413 4870 aa8.4□□□□□ -1.06
TCF3-204ENST00000453954 J3QL48 77 aa8.4□□□□□ -1.06
TCF3-204ENST00000453954 LRP2P98164 4655 aa8.4□□□□□ -1.07
TCF3-204ENST00000453954 PKHD1L1Q86WI1 4243 aa8.38□□□□□ -1.07
TCF3-204ENST00000453954 KIAA1109Q2LD37 5005 aa8.35□□□□□ -1.07
TCF3-204ENST00000453954 LPAP08519 4548 aa8.34□□□□□ -1.07
TCF3-204ENST00000453954 PLAC4Q8WY50 150 aa8.3□□□□□ -1.08
TCF3-204ENST00000453954 LUZP6Q538Z0 58 aa8.29□□□□□ -1.08
TCF3-204ENST00000453954 RYR1P21817 5038 aa8.25□□□□□ -1.09
TCF3-204ENST00000453954 KRTAP17-1Q9BYP8 105 aa8.24□□□□□ -1.09
TCF3-204ENST00000453954 LORP23490 312 aaPredicted RBP8.21□□□□□ -1.1
TCF3-204ENST00000453954 TNXBP22105 4242 aa8.19□□□□□ -1.1
TCF3-204ENST00000453954 EPPK1P58107 5090 aaKnown RBP8.16□□□□□ -1.1
TCF3-204ENST00000453954 MT1HL1P0DM35 61 aa8.1□□□□□ -1.11
TCF3-204ENST00000453954 A0A0A0MQY5 61 aa8.06□□□□□ -1.12
TCF3-204ENST00000453954 SEC61BP60468 96 aaKnown RBP8.04□□□□□ -1.12
TCF3-204ENST00000453954 ABCA13Q86UQ4 5058 aa8.01□□□□□ -1.13
TCF3-204ENST00000453954 M0R2T5 61 aa7.99□□□□□ -1.13
TCF3-204ENST00000453954 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
TCF3-204ENST00000453954 MUC2Q02817 5179 aa7.89□□□□□ -1.15
TCF3-204ENST00000453954 KRTAP4-1Q9BYQ7 146 aa7.81□□□□□ -1.16
TCF3-204ENST00000453954 TNP1P09430 55 aa7.78□□□□□ -1.16
TCF3-204ENST00000453954 PP632Q6XCG6 107 aa7.72□□□□□ -1.17
TCF3-204ENST00000453954 HERC2O95714 4834 aa7.68□□□□□ -1.18
TCF3-204ENST00000453954 FAT4Q6V0I7 4981 aa7.49□□□□□ -1.21
TCF3-204ENST00000453954 HERC1Q15751 4861 aa7.48□□□□□ -1.21
TCF3-204ENST00000453954 MUC17Q685J3 4493 aa7.41□□□□□ -1.22
TCF3-204ENST00000453954 RNF213Q63HN8 5207 aa7.41□□□□□ -1.22
TCF3-204ENST00000453954 KRTAP10-10P60014 251 aa7.4□□□□□ -1.23
TCF3-204ENST00000453954 PCLOQ9Y6V0 5065 aa7.35□□□□□ -1.23
TCF3-204ENST00000453954 LCE3AQ5TA76 89 aa7.29□□□□□ -1.24
TCF3-204ENST00000453954 BIRC6Q9NR09 4857 aa7.28□□□□□ -1.24
TCF3-204ENST00000453954 KRTAP19-2Q3LHN2 52 aa7.18□□□□□ -1.26
TCF3-204ENST00000453954 HMCN2Q8NDA2 5059 aa7.12□□□□□ -1.27
TCF3-204ENST00000453954 FLGP20930 4061 aaPredicted RBP7.11□□□□□ -1.27
TCF3-204ENST00000453954 UBR4Q5T4S7 5183 aa7.11□□□□□ -1.27
TCF3-204ENST00000453954 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
TCF3-204ENST00000453954 SPRR5A0A1B0GTR4 108 aa6.95□□□□□ -1.3
TCF3-204ENST00000453954 FSIP2Q5CZC0 6907 aa6.95□□□□□ -1.3
TCF3-204ENST00000453954 KRTAP23-1A1A580 65 aa6.91□□□□□ -1.3
TCF3-204ENST00000453954 MT1FP04733 61 aa6.89□□□□□ -1.31
TCF3-204ENST00000453954 KRTAP12-3P60328 96 aa6.89□□□□□ -1.31
TCF3-204ENST00000453954 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
TCF3-204ENST00000453954 PRO2289Q9P1D8 64 aa6.86□□□□□ -1.31
TCF3-204ENST00000453954 KRTAP10-12P60413 245 aa6.85□□□□□ -1.31
TCF3-204ENST00000453954 MT2AP02795 61 aa6.82□□□□□ -1.32
TCF3-204ENST00000453954 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
TCF3-204ENST00000453954 MT1HP80294 61 aa6.8□□□□□ -1.32
TCF3-204ENST00000453954 USH2AO75445 5202 aa6.76□□□□□ -1.33
TCF3-204ENST00000453954 KMT2DO14686 5537 aa6.73□□□□□ -1.33
TCF3-204ENST00000453954 KRTAP10-7P60409 375 aaPredicted RBP6.7□□□□□ -1.34
TCF3-204ENST00000453954 KRTAP8-1Q8IUC2 63 aa6.69□□□□□ -1.34
TCF3-204ENST00000453954 INE1O15225 51 aa6.66□□□□□ -1.34
TCF3-204ENST00000453954 OBSCNQ5VST9 7968 aa6.66□□□□□ -1.34
TCF3-204ENST00000453954 KRTAP10-5P60370 271 aa6.63□□□□□ -1.35
TCF3-204ENST00000453954 MT1XP80297 61 aa6.63□□□□□ -1.35
TCF3-204ENST00000453954 MT1BP07438 61 aa6.57□□□□□ -1.36
TCF3-204ENST00000453954 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
TCF3-204ENST00000453954 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
TCF3-204ENST00000453954 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
TCF3-204ENST00000453954 KRTAP19-8Q3LI54 63 aa6.42□□□□□ -1.38
TCF3-204ENST00000453954 KRTAP4-8Q9BYQ9 185 aa6.42□□□□□ -1.38
TCF3-204ENST00000453954 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
TCF3-204ENST00000453954 DSTQ03001 7570 aaKnown RBP6.41□□□□□ -1.38
TCF3-204ENST00000453954 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
TCF3-204ENST00000453954 SYNE1Q8NF91 8797 aaKnown RBP6.37□□□□□ -1.39
TCF3-204ENST00000453954 LCE3CQ5T5A8 94 aa6.34□□□□□ -1.39
TCF3-204ENST00000453954 KRTAP9-3Q9BYQ3 159 aa6.24□□□□□ -1.41
TCF3-204ENST00000453954 FCGBPQ9Y6R7 5405 aaPredicted RBP6.23□□□□□ -1.41
TCF3-204ENST00000453954 KRTAP9-6A8MVA2 160 aa6.16□□□□□ -1.42
TCF3-204ENST00000453954 LCE2BO14633 110 aa6.13□□□□□ -1.43
TCF3-204ENST00000453954 LOC100996750A0A140TA64 210 aa5.9□□□□□ -1.47
TCF3-204ENST00000453954 MUC12Q9UKN1 5478 aa5.89□□□□□ -1.47
TCF3-204ENST00000453954 KRTAP4-3Q9BYR4 195 aa5.87□□□□□ -1.47
TCF3-204ENST00000453954 LCE2AQ5TA79 106 aaPredicted RBP5.86□□□□□ -1.47
TCF3-204ENST00000453954 KRTAP19-7Q3SYF9 63 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms