RNA–Protein interactions for RNA: ENST00000453257.1

TRGVB-201, Transcript of T cell receptor gamma variable B (pseudogene), humanhuman

BASIC

Gene TRGVB, Length 471 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGVB-201ENST00000453257 PKHD1P08F94 4074 aa0.26□□□□□ -2.37
TRGVB-201ENST00000453257 FLGP20930 4061 aaPredicted RBP0.26□□□□□ -2.37
TRGVB-201ENST00000453257 CELSR3Q9NYQ7 3312 aa0.25□□□□□ -2.37
TRGVB-201ENST00000453257 FRYQ5TBA9 3013 aa0.25□□□□□ -2.37
TRGVB-201ENST00000453257 SMR3BP02814 79 aaPredicted RBP0.25□□□□□ -2.37
TRGVB-201ENST00000453257 TMEM167AQ8TBQ9 72 aa0.25□□□□□ -2.37
TRGVB-201ENST00000453257 COL6A3P12111 3177 aa0.25□□□□□ -2.37
TRGVB-201ENST00000453257 ITPR3Q14573 2671 aa0.25□□□□□ -2.37
TRGVB-201ENST00000453257 DNAH1Q9P2D7 4330 aa0.25□□□□□ -2.37
TRGVB-201ENST00000453257 USP9YO00507 2555 aaPredicted RBP0.25□□□□□ -2.37
TRGVB-201ENST00000453257 HIVEP1P15822 2718 aa0.24□□□□□ -2.37
TRGVB-201ENST00000453257 COL12A1Q99715 3063 aa0.24□□□□□ -2.37
TRGVB-201ENST00000453257 DCHS2Q6V1P9 2916 aa0.24□□□□□ -2.37
TRGVB-201ENST00000453257 EPG5Q9HCE0 2579 aa0.24□□□□□ -2.37
TRGVB-201ENST00000453257 LRRK2Q5S007 2527 aa0.24□□□□□ -2.37
TRGVB-201ENST00000453257 RIF1Q5UIP0 2472 aaKnown RBP0.24□□□□□ -2.37
TRGVB-201ENST00000453257 DNAH10Q8IVF4 4471 aa0.24□□□□□ -2.37
TRGVB-201ENST00000453257 LAMA5O15230 3695 aa0.24□□□□□ -2.37
TRGVB-201ENST00000453257 NBEAL2Q6ZNJ1 2754 aa0.23□□□□□ -2.37
TRGVB-201ENST00000453257 IGSF10Q6WRI0 2623 aa0.23□□□□□ -2.37
TRGVB-201ENST00000453257 TEP1Q99973 2627 aaKnown RBP0.23□□□□□ -2.37
TRGVB-201ENST00000453257 SVEP1Q4LDE5 3571 aa0.23□□□□□ -2.37
TRGVB-201ENST00000453257 TGP01266 2768 aa0.23□□□□□ -2.37
TRGVB-201ENST00000453257 DNAH7Q8WXX0 4024 aa0.23□□□□□ -2.37
TRGVB-201ENST00000453257 TRIOO75962 3097 aa0.23□□□□□ -2.37
TRGVB-201ENST00000453257 ZFHX4Q86UP3 3567 aa0.22□□□□□ -2.37
TRGVB-201ENST00000453257 UTP20O75691 2785 aaKnown RBP0.22□□□□□ -2.37
TRGVB-201ENST00000453257 FAT1Q14517 4588 aa0.22□□□□□ -2.37
TRGVB-201ENST00000453257 FAM186AA6NE01 2351 aa0.22□□□□□ -2.37
TRGVB-201ENST00000453257 KALRNO60229 2985 aa0.22□□□□□ -2.37
TRGVB-201ENST00000453257 NBEAQ8NFP9 2946 aa0.22□□□□□ -2.37
TRGVB-201ENST00000453257 MAST4O15021 2626 aa0.21□□□□□ -2.38
TRGVB-201ENST00000453257 HTTP42858 3142 aa0.2□□□□□ -2.38
TRGVB-201ENST00000453257 RHPN1-AS1Q9BWJ2 59 aa0.2□□□□□ -2.38
TRGVB-201ENST00000453257 SPG11Q96JI7 2443 aa0.19□□□□□ -2.38
TRGVB-201ENST00000453257 LRP2P98164 4655 aa0.19□□□□□ -2.38
TRGVB-201ENST00000453257 PLECQ15149 4684 aaKnown RBP0.19□□□□□ -2.38
TRGVB-201ENST00000453257 MYO18BQ8IUG5 2567 aa0.19□□□□□ -2.38
TRGVB-201ENST00000453257 TLN2Q9Y4G6 2542 aa0.19□□□□□ -2.38
TRGVB-201ENST00000453257 HERC1Q15751 4861 aa0.19□□□□□ -2.38
TRGVB-201ENST00000453257 LAMA1P25391 3075 aa0.18□□□□□ -2.38
TRGVB-201ENST00000453257 FASNP49327 2511 aaKnown RBP0.18□□□□□ -2.38
TRGVB-201ENST00000453257 MAP1AP78559 2803 aaPredicted RBP0.18□□□□□ -2.38
TRGVB-201ENST00000453257 MXRA5Q9NR99 2828 aa0.18□□□□□ -2.38
TRGVB-201ENST00000453257 H3BUX3 64 aa0.18□□□□□ -2.38
TRGVB-201ENST00000453257 DEFB1P60022 68 aa0.18□□□□□ -2.38
TRGVB-201ENST00000453257 RELNP78509 3460 aa0.18□□□□□ -2.38
TRGVB-201ENST00000453257 AKAP9Q99996 3911 aa0.18□□□□□ -2.38
TRGVB-201ENST00000453257 ITPR1Q14643 2758 aa0.17□□□□□ -2.38
TRGVB-201ENST00000453257 RPL39P5Q59GN2 51 aa0.17□□□□□ -2.38
TRGVB-201ENST00000453257 SPTBN5Q9NRC6 3674 aaKnown RBP0.17□□□□□ -2.38
TRGVB-201ENST00000453257 WDR87Q6ZQQ6 2873 aa0.17□□□□□ -2.38
TRGVB-201ENST00000453257 MGAQ8IWI9 3026 aa0.16□□□□□ -2.38
TRGVB-201ENST00000453257 CSMD1Q96PZ7 3565 aa0.16□□□□□ -2.38
TRGVB-201ENST00000453257 FLNAP21333 2647 aaKnown RBP0.16□□□□□ -2.38
TRGVB-201ENST00000453257 DYNC1H1Q14204 4646 aaKnown RBP0.16□□□□□ -2.38
TRGVB-201ENST00000453257 DEFB136Q30KP8 78 aa0.15□□□□□ -2.39
TRGVB-201ENST00000453257 DEFB124Q8NES8 71 aa0.15□□□□□ -2.39
TRGVB-201ENST00000453257 MGAM2Q2M2H8 2515 aa0.15□□□□□ -2.39
TRGVB-201ENST00000453257 LAMA3Q16787 3333 aa0.15□□□□□ -2.39
TRGVB-201ENST00000453257 CMYA5Q8N3K9 4069 aa0.14□□□□□ -2.39
TRGVB-201ENST00000453257 A0A096LNI7 61 aa0.14□□□□□ -2.39
TRGVB-201ENST00000453257 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
TRGVB-201ENST00000453257 USP9XQ93008 2570 aaPredicted RBP0.13□□□□□ -2.39
TRGVB-201ENST00000453257 MT1HP80294 61 aa0.13□□□□□ -2.39
TRGVB-201ENST00000453257 SSPOA2VEC9 5147 aa0.13□□□□□ -2.39
TRGVB-201ENST00000453257 DNAH17Q9UFH2 4485 aa0.13□□□□□ -2.39
TRGVB-201ENST00000453257 DMXL2Q8TDJ6 3036 aa0.12□□□□□ -2.39
TRGVB-201ENST00000453257 DEFB108AA8MXU0 73 aa0.12□□□□□ -2.39
TRGVB-201ENST00000453257 CFAP54Q96N23 3096 aa0.12□□□□□ -2.39
TRGVB-201ENST00000453257 NBEAL1Q6ZS30 2694 aa0.1□□□□□ -2.39
TRGVB-201ENST00000453257 MT1EP04732 61 aa0.1□□□□□ -2.39
TRGVB-201ENST00000453257 DNAH5Q8TE73 4624 aa0.1□□□□□ -2.39
TRGVB-201ENST00000453257 NIPBLQ6KC79 2804 aaeCLIP0.09□□□□□ -2.39
TRGVB-201ENST00000453257 STAB2Q8WWQ8 2551 aa0.09□□□□□ -2.39
TRGVB-201ENST00000453257 PCLOQ9Y6V0 5065 aa0.09□□□□□ -2.39
TRGVB-201ENST00000453257 MUC17Q685J3 4493 aa0.09□□□□□ -2.39
TRGVB-201ENST00000453257 ADGRG4Q8IZF6 3080 aa0.09□□□□□ -2.4
TRGVB-201ENST00000453257 TRRAPQ9Y4A5 3859 aa0.08□□□□□ -2.4
TRGVB-201ENST00000453257 C5orf42Q9H799 3197 aa0.07□□□□□ -2.4
TRGVB-201ENST00000453257 HTN1P15515 57 aa0.07□□□□□ -2.4
TRGVB-201ENST00000453257 MT1LQ93083 61 aa0.07□□□□□ -2.4
TRGVB-201ENST00000453257 CEP250Q9BV73 2442 aa0.07□□□□□ -2.4
TRGVB-201ENST00000453257 KMT2CQ8NEZ4 4911 aaKnown RBP0.07□□□□□ -2.4
TRGVB-201ENST00000453257 TEX15Q9BXT5 2789 aa0.06□□□□□ -2.4
TRGVB-201ENST00000453257 RPS29P62273 56 aaKnown RBP0.06□□□□□ -2.4
TRGVB-201ENST00000453257 DEFB133Q30KQ1 61 aa0.06□□□□□ -2.4
TRGVB-201ENST00000453257 ATMQ13315 3056 aa0.06□□□□□ -2.4
TRGVB-201ENST00000453257 SMG1Q96Q15 3661 aaKnown RBP0.06□□□□□ -2.4
TRGVB-201ENST00000453257 LRBAP50851 2863 aa0.05□□□□□ -2.4
TRGVB-201ENST00000453257 SPTAN1Q13813 2472 aaKnown RBP0.05□□□□□ -2.4
TRGVB-201ENST00000453257 STARD9Q9P2P6 4700 aa0.04□□□□□ -2.4
TRGVB-201ENST00000453257 APELAP0DMC3 54 aa0.04□□□□□ -2.4
TRGVB-201ENST00000453257 KRTAP19-7Q3SYF9 63 aa0.04□□□□□ -2.4
TRGVB-201ENST00000453257 USH2AO75445 5202 aa0.04□□□□□ -2.4
TRGVB-201ENST00000453257 MUC2Q02817 5179 aa0.03□□□□□ -2.4
TRGVB-201ENST00000453257 FRYLO94915 3013 aa0.03□□□□□ -2.4
TRGVB-201ENST00000453257 MT1XP80297 61 aa0.03□□□□□ -2.4
TRGVB-201ENST00000453257 KRTAP19-8Q3LI54 63 aa0.02□□□□□ -2.41
TRGVB-201ENST00000453257 CSMD2Q7Z408 3487 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 193.4 ms