RNA–Protein interactions for RNA: ENST00000451349.1

SSXP4-201, Transcript of SSX family pseudogene 4, humanhuman

BASIC

Gene SSXP4, Length 245 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP4-201ENST00000451349 COX14Q96I36 57 aa0.56□□□□□ -2.32
SSXP4-201ENST00000451349 PTPN13Q12923 2485 aa0.56□□□□□ -2.32
SSXP4-201ENST00000451349 COL12A1Q99715 3063 aa0.56□□□□□ -2.32
SSXP4-201ENST00000451349 MTORP42345 2549 aa0.56□□□□□ -2.32
SSXP4-201ENST00000451349 COL7A1Q02388 2944 aa0.55□□□□□ -2.32
SSXP4-201ENST00000451349 LRP1BQ9NZR2 4599 aa0.55□□□□□ -2.32
SSXP4-201ENST00000451349 CD52P31358 61 aa0.55□□□□□ -2.32
SSXP4-201ENST00000451349 SPRR2FQ96RM1 72 aa0.55□□□□□ -2.32
SSXP4-201ENST00000451349 UNC79Q9P2D8 2635 aa0.55□□□□□ -2.32
SSXP4-201ENST00000451349 USP24Q9UPU5 2620 aa0.55□□□□□ -2.32
SSXP4-201ENST00000451349 NSD1Q96L73 2696 aaPredicted RBP0.55□□□□□ -2.32
SSXP4-201ENST00000451349 SMG1Q96Q15 3661 aaKnown RBP0.54□□□□□ -2.32
SSXP4-201ENST00000451349 CMYA5Q8N3K9 4069 aa0.54□□□□□ -2.32
SSXP4-201ENST00000451349 ZZEF1O43149 2961 aa0.54□□□□□ -2.32
SSXP4-201ENST00000451349 A0A096LPF7 62 aa0.54□□□□□ -2.32
SSXP4-201ENST00000451349 SONP18583 2426 aaKnown RBP0.54□□□□□ -2.32
SSXP4-201ENST00000451349 ITPR3Q14573 2671 aa0.53□□□□□ -2.32
SSXP4-201ENST00000451349 CSMD1Q96PZ7 3565 aa0.53□□□□□ -2.32
SSXP4-201ENST00000451349 MAP1BP46821 2468 aaKnown RBP0.53□□□□□ -2.32
SSXP4-201ENST00000451349 MUC16Q8WXI7 14507 aa0.52□□□□□ -2.33
SSXP4-201ENST00000451349 SETXQ7Z333 2677 aaKnown RBP0.52□□□□□ -2.33
SSXP4-201ENST00000451349 SVEP1Q4LDE5 3571 aa0.51□□□□□ -2.33
SSXP4-201ENST00000451349 TRRAPQ9Y4A5 3859 aa0.51□□□□□ -2.33
SSXP4-201ENST00000451349 CFAP54Q96N23 3096 aa0.51□□□□□ -2.33
SSXP4-201ENST00000451349 TENM3Q9P273 2699 aa0.51□□□□□ -2.33
SSXP4-201ENST00000451349 DNAH5Q8TE73 4624 aa0.5□□□□□ -2.33
SSXP4-201ENST00000451349 HRNRQ86YZ3 2850 aaPredicted RBP0.5□□□□□ -2.33
SSXP4-201ENST00000451349 ACACBO00763 2458 aa0.5□□□□□ -2.33
SSXP4-201ENST00000451349 DYNC1H1Q14204 4646 aaKnown RBP0.5□□□□□ -2.33
SSXP4-201ENST00000451349 CACNA1AO00555 2505 aa0.49□□□□□ -2.33
SSXP4-201ENST00000451349 ANKRD11Q6UB99 2663 aaPredicted RBP0.49□□□□□ -2.33
SSXP4-201ENST00000451349 ZANQ9Y493 2812 aa0.48□□□□□ -2.33
SSXP4-201ENST00000451349 FLNBO75369 2602 aaKnown RBP0.48□□□□□ -2.33
SSXP4-201ENST00000451349 USP9YO00507 2555 aaPredicted RBP0.48□□□□□ -2.33
SSXP4-201ENST00000451349 NBEAL2Q6ZNJ1 2754 aa0.47□□□□□ -2.33
SSXP4-201ENST00000451349 FAM186AA6NE01 2351 aa0.47□□□□□ -2.33
SSXP4-201ENST00000451349 ZFYVE26Q68DK2 2539 aa0.47□□□□□ -2.33
SSXP4-201ENST00000451349 HTTP42858 3142 aa0.47□□□□□ -2.33
SSXP4-201ENST00000451349 DMXL2Q8TDJ6 3036 aa0.46□□□□□ -2.34
SSXP4-201ENST00000451349 KALRNO60229 2985 aa0.46□□□□□ -2.34
SSXP4-201ENST00000451349 NCOR2Q9Y618 2525 aa0.46□□□□□ -2.34
SSXP4-201ENST00000451349 RIF1Q5UIP0 2472 aaKnown RBP0.46□□□□□ -2.34
SSXP4-201ENST00000451349 HMCN2Q8NDA2 5059 aa0.46□□□□□ -2.34
SSXP4-201ENST00000451349 FRYLO94915 3013 aa0.46□□□□□ -2.34
SSXP4-201ENST00000451349 SZT2Q5T011 3432 aa0.45□□□□□ -2.34
SSXP4-201ENST00000451349 NBEAQ8NFP9 2946 aa0.45□□□□□ -2.34
SSXP4-201ENST00000451349 HERC1Q15751 4861 aa0.45□□□□□ -2.34
SSXP4-201ENST00000451349 UTP20O75691 2785 aaKnown RBP0.45□□□□□ -2.34
SSXP4-201ENST00000451349 EPG5Q9HCE0 2579 aa0.45□□□□□ -2.34
SSXP4-201ENST00000451349 MT1EP04732 61 aa0.44□□□□□ -2.34
SSXP4-201ENST00000451349 ANKHD1Q8IWZ3 2542 aaKnown RBP0.44□□□□□ -2.34
SSXP4-201ENST00000451349 DNAH17Q9UFH2 4485 aa0.44□□□□□ -2.34
SSXP4-201ENST00000451349 MT1HP80294 61 aa0.43□□□□□ -2.34
SSXP4-201ENST00000451349 COL6A3P12111 3177 aa0.43□□□□□ -2.34
SSXP4-201ENST00000451349 DMDP11532 3685 aa0.43□□□□□ -2.34
SSXP4-201ENST00000451349 HIVEP1P15822 2718 aa0.42□□□□□ -2.34
SSXP4-201ENST00000451349 LRRK2Q5S007 2527 aa0.42□□□□□ -2.34
SSXP4-201ENST00000451349 ATMQ13315 3056 aa0.41□□□□□ -2.34
SSXP4-201ENST00000451349 CSMD2Q7Z408 3487 aa0.41□□□□□ -2.34
SSXP4-201ENST00000451349 TGP01266 2768 aa0.41□□□□□ -2.34
SSXP4-201ENST00000451349 WDR87Q6ZQQ6 2873 aa0.41□□□□□ -2.34
SSXP4-201ENST00000451349 LAMA3Q16787 3333 aa0.41□□□□□ -2.34
SSXP4-201ENST00000451349 VPS13CQ709C8 3753 aa0.41□□□□□ -2.34
SSXP4-201ENST00000451349 NIPBLQ6KC79 2804 aaeCLIP0.4□□□□□ -2.35
SSXP4-201ENST00000451349 C5orf42Q9H799 3197 aa0.4□□□□□ -2.35
SSXP4-201ENST00000451349 LAMA1P25391 3075 aa0.4□□□□□ -2.35
SSXP4-201ENST00000451349 MUC17Q685J3 4493 aa0.4□□□□□ -2.35
SSXP4-201ENST00000451349 FAT4Q6V0I7 4981 aa0.39□□□□□ -2.35
SSXP4-201ENST00000451349 MT1LQ93083 61 aa0.39□□□□□ -2.35
SSXP4-201ENST00000451349 SPG11Q96JI7 2443 aa0.38□□□□□ -2.35
SSXP4-201ENST00000451349 DEFB4AO15263 64 aa0.38□□□□□ -2.35
SSXP4-201ENST00000451349 ITPR1Q14643 2758 aa0.38□□□□□ -2.35
SSXP4-201ENST00000451349 MXRA5Q9NR99 2828 aa0.37□□□□□ -2.35
SSXP4-201ENST00000451349 XIRP2A4UGR9 3374 aa0.37□□□□□ -2.35
SSXP4-201ENST00000451349 PRUNE2Q8WUY3 3088 aa0.37□□□□□ -2.35
SSXP4-201ENST00000451349 TEP1Q99973 2627 aaKnown RBP0.37□□□□□ -2.35
SSXP4-201ENST00000451349 LRP2P98164 4655 aa0.37□□□□□ -2.35
SSXP4-201ENST00000451349 LRBAP50851 2863 aa0.37□□□□□ -2.35
SSXP4-201ENST00000451349 TLN2Q9Y4G6 2542 aa0.36□□□□□ -2.35
SSXP4-201ENST00000451349 MKI67P46013 3256 aaKnown RBP0.36□□□□□ -2.35
SSXP4-201ENST00000451349 DNAH12Q6ZR08 3092 aa0.36□□□□□ -2.35
SSXP4-201ENST00000451349 ADGRG4Q8IZF6 3080 aa0.36□□□□□ -2.35
SSXP4-201ENST00000451349 HTN3P15516 51 aa0.36□□□□□ -2.35
SSXP4-201ENST00000451349 DCHS1Q96JQ0 3298 aa0.36□□□□□ -2.35
SSXP4-201ENST00000451349 MYO18BQ8IUG5 2567 aa0.35□□□□□ -2.35
SSXP4-201ENST00000451349 FASNP49327 2511 aaKnown RBP0.34□□□□□ -2.35
SSXP4-201ENST00000451349 MGAM2Q2M2H8 2515 aa0.33□□□□□ -2.36
SSXP4-201ENST00000451349 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
SSXP4-201ENST00000451349 MDN1Q9NU22 5596 aa0.33□□□□□ -2.36
SSXP4-201ENST00000451349 BOD1L1Q8NFC6 3051 aa0.33□□□□□ -2.36
SSXP4-201ENST00000451349 FLNAP21333 2647 aaKnown RBP0.33□□□□□ -2.36
SSXP4-201ENST00000451349 MUC3AQ02505 3323 aa0.32□□□□□ -2.36
SSXP4-201ENST00000451349 TEX15Q9BXT5 2789 aa0.32□□□□□ -2.36
SSXP4-201ENST00000451349 FREM2Q5SZK8 3169 aa0.32□□□□□ -2.36
SSXP4-201ENST00000451349 CEP250Q9BV73 2442 aa0.32□□□□□ -2.36
SSXP4-201ENST00000451349 MT1XP80297 61 aa0.32□□□□□ -2.36
SSXP4-201ENST00000451349 STARD9Q9P2P6 4700 aa0.32□□□□□ -2.36
SSXP4-201ENST00000451349 SSPOA2VEC9 5147 aa0.31□□□□□ -2.36
SSXP4-201ENST00000451349 USP9XQ93008 2570 aaPredicted RBP0.31□□□□□ -2.36
SSXP4-201ENST00000451349 KMT2CQ8NEZ4 4911 aaKnown RBP0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 229.1 ms