RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 PLAC4Q8WY50 150 aa3.71□□□□□ -1.82
BEST1-202ENST00000449131 LRP1BQ9NZR2 4599 aa3.69□□□□□ -1.82
BEST1-202ENST00000449131 FAT1Q14517 4588 aa3.69□□□□□ -1.82
BEST1-202ENST00000449131 DNAH8Q96JB1 4490 aa3.68□□□□□ -1.82
BEST1-202ENST00000449131 DNAH17Q9UFH2 4485 aa3.68□□□□□ -1.82
BEST1-202ENST00000449131 A0A1B0GVY2 172 aa3.68□□□□□ -1.82
BEST1-202ENST00000449131 P0C880 135 aa3.68□□□□□ -1.82
BEST1-202ENST00000449131 LCE2BO14633 110 aa3.67□□□□□ -1.82
BEST1-202ENST00000449131 DNAH5Q8TE73 4624 aa3.67□□□□□ -1.82
BEST1-202ENST00000449131 DYNC2H1Q8NCM8 4307 aaKnown RBP3.67□□□□□ -1.82
BEST1-202ENST00000449131 KRTAP10-8P60410 259 aa3.66□□□□□ -1.82
BEST1-202ENST00000449131 PKHD1P08F94 4074 aa3.66□□□□□ -1.82
BEST1-202ENST00000449131 TPRXLQ17RH7 258 aa3.65□□□□□ -1.82
BEST1-202ENST00000449131 HECTD4Q9Y4D8 3996 aa3.65□□□□□ -1.82
BEST1-202ENST00000449131 KRTAP3-1Q9BYR8 98 aa3.64□□□□□ -1.83
BEST1-202ENST00000449131 KMT2CQ8NEZ4 4911 aaKnown RBP3.63□□□□□ -1.83
BEST1-202ENST00000449131 VPS13BQ7Z7G8 4022 aa3.6□□□□□ -1.83
BEST1-202ENST00000449131 SACSQ9NZJ4 4579 aa3.6□□□□□ -1.83
BEST1-202ENST00000449131 TNP1P09430 55 aa3.6□□□□□ -1.83
BEST1-202ENST00000449131 DYNC1H1Q14204 4646 aaKnown RBP3.59□□□□□ -1.83
BEST1-202ENST00000449131 LCE2AQ5TA79 106 aaPredicted RBP3.58□□□□□ -1.84
BEST1-202ENST00000449131 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
BEST1-202ENST00000449131 KIAA1109Q2LD37 5005 aa3.55□□□□□ -1.84
BEST1-202ENST00000449131 FAT2Q9NYQ8 4349 aa3.55□□□□□ -1.84
BEST1-202ENST00000449131 KRTAP12-2P59991 146 aa3.54□□□□□ -1.84
BEST1-202ENST00000449131 ALMS1Q8TCU4 4167 aa3.53□□□□□ -1.84
BEST1-202ENST00000449131 MYCBP2O75592 4640 aa3.53□□□□□ -1.84
BEST1-202ENST00000449131 LRP1Q07954 4544 aaKnown RBP3.52□□□□□ -1.85
BEST1-202ENST00000449131 APOBP04114 4563 aaKnown RBP3.52□□□□□ -1.85
BEST1-202ENST00000449131 PP632Q6XCG6 107 aa3.51□□□□□ -1.85
BEST1-202ENST00000449131 PKD1P98161 4303 aa3.51□□□□□ -1.85
BEST1-202ENST00000449131 RYR3Q15413 4870 aa3.51□□□□□ -1.85
BEST1-202ENST00000449131 RYR2Q92736 4967 aa3.49□□□□□ -1.85
BEST1-202ENST00000449131 FAT3Q8TDW7 4589 aa3.49□□□□□ -1.85
BEST1-202ENST00000449131 KRTAP10-6P60371 365 aaPredicted RBP3.49□□□□□ -1.85
BEST1-202ENST00000449131 KRTAP10-4P60372 401 aaPredicted RBP3.48□□□□□ -1.85
BEST1-202ENST00000449131 RYR1P21817 5038 aa3.47□□□□□ -1.85
BEST1-202ENST00000449131 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
BEST1-202ENST00000449131 KRTAP4-5Q9BYR2 181 aa3.47□□□□□ -1.85
BEST1-202ENST00000449131 KRTAP15-1Q3LI76 137 aa3.47□□□□□ -1.85
BEST1-202ENST00000449131 KRTAP10-10P60014 251 aa3.46□□□□□ -1.86
BEST1-202ENST00000449131 LORP23490 312 aaPredicted RBP3.44□□□□□ -1.86
BEST1-202ENST00000449131 KRTAP17-1Q9BYP8 105 aa3.44□□□□□ -1.86
BEST1-202ENST00000449131 MT1HL1P0DM35 61 aa3.42□□□□□ -1.86
BEST1-202ENST00000449131 EPPK1P58107 5090 aaKnown RBP3.41□□□□□ -1.86
BEST1-202ENST00000449131 PRO2289Q9P1D8 64 aa3.37□□□□□ -1.87
BEST1-202ENST00000449131 HSPG2P98160 4391 aa3.37□□□□□ -1.87
BEST1-202ENST00000449131 LRP2P98164 4655 aa3.3□□□□□ -1.88
BEST1-202ENST00000449131 LPAP08519 4548 aa3.29□□□□□ -1.88
BEST1-202ENST00000449131 PKHD1L1Q86WI1 4243 aa3.28□□□□□ -1.88
BEST1-202ENST00000449131 HERC2O95714 4834 aa3.28□□□□□ -1.88
BEST1-202ENST00000449131 ABCA13Q86UQ4 5058 aa3.25□□□□□ -1.89
BEST1-202ENST00000449131 TNXBP22105 4242 aa3.21□□□□□ -1.89
BEST1-202ENST00000449131 MUC2Q02817 5179 aa3.21□□□□□ -1.9
BEST1-202ENST00000449131 INE1O15225 51 aa3.19□□□□□ -1.9
BEST1-202ENST00000449131 HERC1Q15751 4861 aa3.17□□□□□ -1.9
BEST1-202ENST00000449131 KRTAP4-1Q9BYQ7 146 aa3.13□□□□□ -1.91
BEST1-202ENST00000449131 KRTAP19-4Q3LI73 84 aa3.12□□□□□ -1.91
BEST1-202ENST00000449131 BIRC6Q9NR09 4857 aa3.12□□□□□ -1.91
BEST1-202ENST00000449131 RNF213Q63HN8 5207 aa3.11□□□□□ -1.91
BEST1-202ENST00000449131 PCLOQ9Y6V0 5065 aa3.1□□□□□ -1.91
BEST1-202ENST00000449131 FAT4Q6V0I7 4981 aa3.05□□□□□ -1.92
BEST1-202ENST00000449131 UBR4Q5T4S7 5183 aa3.05□□□□□ -1.92
BEST1-202ENST00000449131 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
BEST1-202ENST00000449131 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
BEST1-202ENST00000449131 KRTAP12-3P60328 96 aa3□□□□□ -1.93
BEST1-202ENST00000449131 HMCN2Q8NDA2 5059 aa2.93□□□□□ -1.94
BEST1-202ENST00000449131 MT1HP80294 61 aa2.92□□□□□ -1.94
BEST1-202ENST00000449131 MT2AP02795 61 aa2.9□□□□□ -1.94
BEST1-202ENST00000449131 SPRR2GQ9BYE4 73 aa2.89□□□□□ -1.95
BEST1-202ENST00000449131 MUC17Q685J3 4493 aa2.89□□□□□ -1.95
BEST1-202ENST00000449131 CRCT1Q9UGL9 99 aa2.88□□□□□ -1.95
BEST1-202ENST00000449131 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
BEST1-202ENST00000449131 MT1FP04733 61 aa2.87□□□□□ -1.95
BEST1-202ENST00000449131 KRTAP19-2Q3LHN2 52 aa2.84□□□□□ -1.95
BEST1-202ENST00000449131 FLGP20930 4061 aaPredicted RBP2.81□□□□□ -1.96
BEST1-202ENST00000449131 KRTAP19-1Q8IUB9 90 aa2.79□□□□□ -1.96
BEST1-202ENST00000449131 MT3P25713 68 aa2.77□□□□□ -1.97
BEST1-202ENST00000449131 KRTAP8-1Q8IUC2 63 aa2.76□□□□□ -1.97
BEST1-202ENST00000449131 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
BEST1-202ENST00000449131 USH2AO75445 5202 aa2.74□□□□□ -1.97
BEST1-202ENST00000449131 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
BEST1-202ENST00000449131 KRTAP19-8Q3LI54 63 aa2.71□□□□□ -1.98
BEST1-202ENST00000449131 KRTAP9-8Q9BYQ0 159 aa2.71□□□□□ -1.98
BEST1-202ENST00000449131 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
BEST1-202ENST00000449131 KRTAP10-7P60409 375 aaPredicted RBP2.7□□□□□ -1.98
BEST1-202ENST00000449131 KRTAP10-5P60370 271 aa2.68□□□□□ -1.98
BEST1-202ENST00000449131 MT1XP80297 61 aa2.67□□□□□ -1.98
BEST1-202ENST00000449131 MT1BP07438 61 aa2.66□□□□□ -1.98
BEST1-202ENST00000449131 LCE3CQ5T5A8 94 aa2.66□□□□□ -1.98
BEST1-202ENST00000449131 LCE5AQ5TCM9 118 aa2.65□□□□□ -1.98
BEST1-202ENST00000449131 KRTAP9-4Q9BYQ2 154 aa2.65□□□□□ -1.99
BEST1-202ENST00000449131 SYNE1Q8NF91 8797 aaKnown RBP2.63□□□□□ -1.99
BEST1-202ENST00000449131 LCE4AQ5TA78 99 aa2.63□□□□□ -1.99
BEST1-202ENST00000449131 KRTAP4-8A0A0G2JLE6 195 aa2.62□□□□□ -1.99
BEST1-202ENST00000449131 KRTAP4-8Q9BYQ9 185 aa2.62□□□□□ -1.99
BEST1-202ENST00000449131 KRTAP9-3Q9BYQ3 159 aa2.59□□□□□ -1.99
BEST1-202ENST00000449131 KMT2DO14686 5537 aa2.59□□□□□ -1.99
BEST1-202ENST00000449131 SPRR2FQ96RM1 72 aa2.58□□□□□ -2
BEST1-202ENST00000449131 KRTAP4-7Q9BYR0 210 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms