RNA–Protein interactions for RNA: ENST00000448587.5

TINCR-201, Transcript of TINCR ubiquitin domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TINCR, Length 3,733 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TINCR-201ENST00000448587 KRTAP10-8P60410 259 aa10.18□□□□□ -0.78
TINCR-201ENST00000448587 RPS29P62273 56 aaKnown RBP10.18□□□□□ -0.78
TINCR-201ENST00000448587 XP32Q5T750 250 aa10.15□□□□□ -0.78
TINCR-201ENST00000448587 J3QL48 77 aa10.14□□□□□ -0.79
TINCR-201ENST00000448587 KRTAP10-4P60372 401 aaPredicted RBP10.14□□□□□ -0.79
TINCR-201ENST00000448587 RYR1P21817 5038 aa10.1□□□□□ -0.79
TINCR-201ENST00000448587 RPL37P61927 97 aaKnown RBP10.07□□□□□ -0.8
TINCR-201ENST00000448587 P0C880 135 aa10.06□□□□□ -0.8
TINCR-201ENST00000448587 RYR3Q15413 4870 aa10.03□□□□□ -0.8
TINCR-201ENST00000448587 KRTAP21-3Q3LHN1 58 aa9.99□□□□□ -0.81
TINCR-201ENST00000448587 C10orf95Q9H7T3 257 aa9.98□□□□□ -0.81
TINCR-201ENST00000448587 KRTAP17-1Q9BYP8 105 aa9.94□□□□□ -0.82
TINCR-201ENST00000448587 KRTAP13-4Q3LI77 160 aa9.91□□□□□ -0.82
TINCR-201ENST00000448587 RYR2Q92736 4967 aa9.89□□□□□ -0.83
TINCR-201ENST00000448587 KRTAP4-5Q9BYR2 181 aa9.89□□□□□ -0.83
TINCR-201ENST00000448587 LRP2P98164 4655 aa9.87□□□□□ -0.83
TINCR-201ENST00000448587 HSPG2P98160 4391 aa9.85□□□□□ -0.83
TINCR-201ENST00000448587 M0QZ58 72 aa9.83□□□□□ -0.84
TINCR-201ENST00000448587 KRTAP25-1Q3LHN0 102 aa9.83□□□□□ -0.84
TINCR-201ENST00000448587 ROMO1P60602 79 aa9.82□□□□□ -0.84
TINCR-201ENST00000448587 R4GN34 69 aa9.8□□□□□ -0.84
TINCR-201ENST00000448587 KRTAP3-3Q9BYR6 98 aa9.76□□□□□ -0.85
TINCR-201ENST00000448587 MT1HL1P0DM35 61 aa9.76□□□□□ -0.85
TINCR-201ENST00000448587 KRTAP10-6P60371 365 aaPredicted RBP9.75□□□□□ -0.85
TINCR-201ENST00000448587 LPAP08519 4548 aa9.72□□□□□ -0.85
TINCR-201ENST00000448587 PKHD1L1Q86WI1 4243 aa9.67□□□□□ -0.86
TINCR-201ENST00000448587 KRTAP12-2P59991 146 aa9.66□□□□□ -0.86
TINCR-201ENST00000448587 H3BS24 57 aa9.66□□□□□ -0.86
TINCR-201ENST00000448587 EPPK1P58107 5090 aaKnown RBP9.62□□□□□ -0.87
TINCR-201ENST00000448587 KRTAP3-2Q9BYR7 98 aa9.6□□□□□ -0.87
TINCR-201ENST00000448587 SEC61BP60468 96 aaKnown RBP9.57□□□□□ -0.88
TINCR-201ENST00000448587 CAMK2N1Q7Z7J9 78 aa9.56□□□□□ -0.88
TINCR-201ENST00000448587 TPRXLQ17RH7 258 aa9.5□□□□□ -0.89
TINCR-201ENST00000448587 ABCA13Q86UQ4 5058 aa9.5□□□□□ -0.89
TINCR-201ENST00000448587 MUC2Q02817 5179 aa9.47□□□□□ -0.89
TINCR-201ENST00000448587 M0R2T5 61 aa9.44□□□□□ -0.9
TINCR-201ENST00000448587 KRTAP12-1P59990 96 aa9.42□□□□□ -0.9
TINCR-201ENST00000448587 TNXBP22105 4242 aa9.4□□□□□ -0.91
TINCR-201ENST00000448587 LORP23490 312 aaPredicted RBP9.35□□□□□ -0.91
TINCR-201ENST00000448587 HERC2O95714 4834 aa9.31□□□□□ -0.92
TINCR-201ENST00000448587 NDUFAF8A1L188 74 aa9.31□□□□□ -0.92
TINCR-201ENST00000448587 KRTAP4-1Q9BYQ7 146 aa9.26□□□□□ -0.93
TINCR-201ENST00000448587 HERC1Q15751 4861 aa9.04□□□□□ -0.96
TINCR-201ENST00000448587 FAT4Q6V0I7 4981 aa9.03□□□□□ -0.96
TINCR-201ENST00000448587 RNF213Q63HN8 5207 aa9.03□□□□□ -0.96
TINCR-201ENST00000448587 PLAC4Q8WY50 150 aa8.83□□□□□ -1
TINCR-201ENST00000448587 LUZP6Q538Z0 58 aa8.8□□□□□ -1
TINCR-201ENST00000448587 KRTAP10-10P60014 251 aa8.78□□□□□ -1
TINCR-201ENST00000448587 TNP1P09430 55 aa8.72□□□□□ -1.01
TINCR-201ENST00000448587 PCLOQ9Y6V0 5065 aa8.71□□□□□ -1.02
TINCR-201ENST00000448587 UBR4Q5T4S7 5183 aa8.69□□□□□ -1.02
TINCR-201ENST00000448587 KRTAP15-1Q3LI76 137 aa8.67□□□□□ -1.02
TINCR-201ENST00000448587 MUC17Q685J3 4493 aa8.52□□□□□ -1.05
TINCR-201ENST00000448587 BIRC6Q9NR09 4857 aa8.51□□□□□ -1.05
TINCR-201ENST00000448587 HMCN2Q8NDA2 5059 aa8.47□□□□□ -1.05
TINCR-201ENST00000448587 KRTAP19-2Q3LHN2 52 aa8.37□□□□□ -1.07
TINCR-201ENST00000448587 PP632Q6XCG6 107 aa8.36□□□□□ -1.07
TINCR-201ENST00000448587 FSIP2Q5CZC0 6907 aa8.3□□□□□ -1.08
TINCR-201ENST00000448587 FLGP20930 4061 aaPredicted RBP8.28□□□□□ -1.08
TINCR-201ENST00000448587 MT1HP80294 61 aa8.23□□□□□ -1.09
TINCR-201ENST00000448587 MT1FP04733 61 aa8.2□□□□□ -1.1
TINCR-201ENST00000448587 LCE3AQ5TA76 89 aa8.18□□□□□ -1.1
TINCR-201ENST00000448587 A0A0A0MQY5 61 aa8.17□□□□□ -1.1
TINCR-201ENST00000448587 LCE2CQ5TA81 110 aa8.17□□□□□ -1.1
TINCR-201ENST00000448587 MT2AP02795 61 aa8.14□□□□□ -1.11
TINCR-201ENST00000448587 USH2AO75445 5202 aa8.13□□□□□ -1.11
TINCR-201ENST00000448587 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
TINCR-201ENST00000448587 SPRR2GQ9BYE4 73 aa7.95□□□□□ -1.14
TINCR-201ENST00000448587 KMT2DO14686 5537 aa7.9□□□□□ -1.14
TINCR-201ENST00000448587 KRTAP9-8Q9BYQ0 159 aa7.86□□□□□ -1.15
TINCR-201ENST00000448587 KRTAP10-12P60413 245 aa7.85□□□□□ -1.15
TINCR-201ENST00000448587 KRTAP12-3P60328 96 aa7.77□□□□□ -1.17
TINCR-201ENST00000448587 KRTAP10-7P60409 375 aaPredicted RBP7.75□□□□□ -1.17
TINCR-201ENST00000448587 PRO2289Q9P1D8 64 aa7.74□□□□□ -1.17
TINCR-201ENST00000448587 MT1BP07438 61 aa7.7□□□□□ -1.18
TINCR-201ENST00000448587 MT1XP80297 61 aa7.66□□□□□ -1.18
TINCR-201ENST00000448587 KRTAP10-5P60370 271 aa7.64□□□□□ -1.19
TINCR-201ENST00000448587 KRTAP4-8A0A0G2JLE6 195 aa7.56□□□□□ -1.2
TINCR-201ENST00000448587 KRTAP4-8Q9BYQ9 185 aa7.56□□□□□ -1.2
TINCR-201ENST00000448587 KRTAP9-3Q9BYQ3 159 aa7.49□□□□□ -1.21
TINCR-201ENST00000448587 KRTAP19-8Q3LI54 63 aa7.48□□□□□ -1.21
TINCR-201ENST00000448587 KRTAP23-1A1A580 65 aa7.46□□□□□ -1.21
TINCR-201ENST00000448587 OBSCNQ5VST9 7968 aa7.46□□□□□ -1.22
TINCR-201ENST00000448587 KRTAP19-5Q3LI72 72 aa7.45□□□□□ -1.22
TINCR-201ENST00000448587 LCE2BO14633 110 aa7.43□□□□□ -1.22
TINCR-201ENST00000448587 KRTAP8-1Q8IUC2 63 aa7.43□□□□□ -1.22
TINCR-201ENST00000448587 DSTQ03001 7570 aaKnown RBP7.43□□□□□ -1.22
TINCR-201ENST00000448587 CRCT1Q9UGL9 99 aa7.4□□□□□ -1.23
TINCR-201ENST00000448587 KRTAP4-7Q9BYR0 210 aa7.3□□□□□ -1.24
TINCR-201ENST00000448587 SPRR5A0A1B0GTR4 108 aa7.26□□□□□ -1.25
TINCR-201ENST00000448587 SYNE1Q8NF91 8797 aaKnown RBP7.25□□□□□ -1.25
TINCR-201ENST00000448587 FCGBPQ9Y6R7 5405 aaPredicted RBP7.22□□□□□ -1.25
TINCR-201ENST00000448587 LCE3CQ5T5A8 94 aa7.08□□□□□ -1.28
TINCR-201ENST00000448587 MUC12Q9UKN1 5478 aa7.05□□□□□ -1.28
TINCR-201ENST00000448587 SSPOA2VEC9 5147 aa6.93□□□□□ -1.3
TINCR-201ENST00000448587 LCE2AQ5TA79 106 aaPredicted RBP6.92□□□□□ -1.3
TINCR-201ENST00000448587 KRTAP4-3Q9BYR4 195 aa6.85□□□□□ -1.31
TINCR-201ENST00000448587 KRTAP9-6A8MVA2 160 aa6.82□□□□□ -1.32
TINCR-201ENST00000448587 SYNE2Q8WXH0 6885 aaKnown RBP6.79□□□□□ -1.32
TINCR-201ENST00000448587 LOC100996750A0A140TA64 210 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms