RNA–Protein interactions for RNA: ENST00000447431.6

SRRM1-203, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-203ENST00000447431 R4GN34 69 aa2.53□□□□□ -2
SRRM1-203ENST00000447431 KRTAP10-6P60371 365 aaPredicted RBP2.53□□□□□ -2.01
SRRM1-203ENST00000447431 ALMS1Q8TCU4 4167 aa2.52□□□□□ -2.01
SRRM1-203ENST00000447431 LCE4AQ5TA78 99 aa2.52□□□□□ -2.01
SRRM1-203ENST00000447431 KRTAP21-3Q3LHN1 58 aa2.5□□□□□ -2.01
SRRM1-203ENST00000447431 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
SRRM1-203ENST00000447431 KRTAP12-2P59991 146 aa2.5□□□□□ -2.01
SRRM1-203ENST00000447431 KRTAP13-4Q3LI77 160 aa2.5□□□□□ -2.01
SRRM1-203ENST00000447431 HUWE1Q7Z6Z7 4374 aaKnown RBP2.5□□□□□ -2.01
SRRM1-203ENST00000447431 KRTAP9-7A8MTY7 169 aa2.49□□□□□ -2.01
SRRM1-203ENST00000447431 KRTAP12-1P59990 96 aa2.49□□□□□ -2.01
SRRM1-203ENST00000447431 DNAH7Q8WXX0 4024 aa2.49□□□□□ -2.01
SRRM1-203ENST00000447431 DNAH9Q9NYC9 4486 aa2.48□□□□□ -2.01
SRRM1-203ENST00000447431 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
SRRM1-203ENST00000447431 KRTAP9-4Q9BYQ2 154 aa2.46□□□□□ -2.02
SRRM1-203ENST00000447431 STARD9Q9P2P6 4700 aa2.44□□□□□ -2.02
SRRM1-203ENST00000447431 PLECQ15149 4684 aaKnown RBP2.43□□□□□ -2.02
SRRM1-203ENST00000447431 KMT2AQ03164 3969 aa2.42□□□□□ -2.02
SRRM1-203ENST00000447431 DNAH10Q8IVF4 4471 aa2.42□□□□□ -2.02
SRRM1-203ENST00000447431 DNAH1Q9P2D7 4330 aa2.41□□□□□ -2.02
SRRM1-203ENST00000447431 KRTAP10-8P60410 259 aa2.41□□□□□ -2.02
SRRM1-203ENST00000447431 LCE1DQ5T752 114 aa2.4□□□□□ -2.03
SRRM1-203ENST00000447431 KRTAP4-8A0A0G2JLE6 195 aa2.39□□□□□ -2.03
SRRM1-203ENST00000447431 DYNC2H1Q8NCM8 4307 aaKnown RBP2.39□□□□□ -2.03
SRRM1-203ENST00000447431 HYDINQ4G0P3 5121 aa2.37□□□□□ -2.03
SRRM1-203ENST00000447431 FRAS1Q86XX4 4008 aa2.37□□□□□ -2.03
SRRM1-203ENST00000447431 TNP1P09430 55 aa2.37□□□□□ -2.03
SRRM1-203ENST00000447431 KMT2CQ8NEZ4 4911 aaKnown RBP2.37□□□□□ -2.03
SRRM1-203ENST00000447431 KRTAP9-3Q9BYQ3 159 aa2.37□□□□□ -2.03
SRRM1-203ENST00000447431 VPS13DQ5THJ4 4388 aa2.36□□□□□ -2.03
SRRM1-203ENST00000447431 DNAH2Q9P225 4427 aa2.36□□□□□ -2.03
SRRM1-203ENST00000447431 DNAH8Q96JB1 4490 aa2.34□□□□□ -2.04
SRRM1-203ENST00000447431 Q5VSD8 79 aa2.33□□□□□ -2.04
SRRM1-203ENST00000447431 LCE5AQ5TCM9 118 aa2.33□□□□□ -2.04
SRRM1-203ENST00000447431 DNAH6Q9C0G6 4158 aa2.32□□□□□ -2.04
SRRM1-203ENST00000447431 HECTD4Q9Y4D8 3996 aa2.32□□□□□ -2.04
SRRM1-203ENST00000447431 SACSQ9NZJ4 4579 aa2.31□□□□□ -2.04
SRRM1-203ENST00000447431 PKHD1P08F94 4074 aa2.31□□□□□ -2.04
SRRM1-203ENST00000447431 PRO2289Q9P1D8 64 aa2.3□□□□□ -2.04
SRRM1-203ENST00000447431 KRTAP4-7Q9BYR0 210 aa2.29□□□□□ -2.04
SRRM1-203ENST00000447431 FAT2Q9NYQ8 4349 aa2.29□□□□□ -2.04
SRRM1-203ENST00000447431 RYR3Q15413 4870 aa2.28□□□□□ -2.04
SRRM1-203ENST00000447431 DNAH17Q9UFH2 4485 aa2.28□□□□□ -2.04
SRRM1-203ENST00000447431 KRTAP4-9Q9BYQ8 210 aa2.28□□□□□ -2.05
SRRM1-203ENST00000447431 PKD1P98161 4303 aa2.27□□□□□ -2.05
SRRM1-203ENST00000447431 INE1O15225 51 aa2.27□□□□□ -2.05
SRRM1-203ENST00000447431 DNAH11Q96DT5 4516 aa2.27□□□□□ -2.05
SRRM1-203ENST00000447431 DNAH5Q8TE73 4624 aa2.27□□□□□ -2.05
SRRM1-203ENST00000447431 KRTAP10-4P60372 401 aaPredicted RBP2.26□□□□□ -2.05
SRRM1-203ENST00000447431 RYR2Q92736 4967 aa2.26□□□□□ -2.05
SRRM1-203ENST00000447431 A0A1B0GVY2 172 aa2.25□□□□□ -2.05
SRRM1-203ENST00000447431 KIAA1109Q2LD37 5005 aa2.24□□□□□ -2.05
SRRM1-203ENST00000447431 MT3P25713 68 aa2.24□□□□□ -2.05
SRRM1-203ENST00000447431 EPPK1P58107 5090 aaKnown RBP2.24□□□□□ -2.05
SRRM1-203ENST00000447431 KRTAP4-11Q9BYQ6 195 aa2.23□□□□□ -2.05
SRRM1-203ENST00000447431 FAT1Q14517 4588 aa2.22□□□□□ -2.05
SRRM1-203ENST00000447431 LRP1BQ9NZR2 4599 aa2.21□□□□□ -2.05
SRRM1-203ENST00000447431 VPS13BQ7Z7G8 4022 aa2.21□□□□□ -2.06
SRRM1-203ENST00000447431 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
SRRM1-203ENST00000447431 DYNC1H1Q14204 4646 aaKnown RBP2.19□□□□□ -2.06
SRRM1-203ENST00000447431 KRTAP4-5Q9BYR2 181 aa2.17□□□□□ -2.06
SRRM1-203ENST00000447431 KRTAP4-2Q9BYR5 136 aa2.17□□□□□ -2.06
SRRM1-203ENST00000447431 APOBP04114 4563 aaKnown RBP2.17□□□□□ -2.06
SRRM1-203ENST00000447431 RYR1P21817 5038 aa2.17□□□□□ -2.06
SRRM1-203ENST00000447431 MYCBP2O75592 4640 aa2.16□□□□□ -2.06
SRRM1-203ENST00000447431 KRTAP9-8Q9BYQ0 159 aa2.16□□□□□ -2.06
SRRM1-203ENST00000447431 KRTAP17-1Q9BYP8 105 aa2.15□□□□□ -2.06
SRRM1-203ENST00000447431 SPRR5A0A1B0GTR4 108 aa2.15□□□□□ -2.07
SRRM1-203ENST00000447431 HSPG2P98160 4391 aa2.14□□□□□ -2.07
SRRM1-203ENST00000447431 LRP1Q07954 4544 aaKnown RBP2.14□□□□□ -2.07
SRRM1-203ENST00000447431 MT1HL1P0DM35 61 aa2.13□□□□□ -2.07
SRRM1-203ENST00000447431 FAT3Q8TDW7 4589 aa2.12□□□□□ -2.07
SRRM1-203ENST00000447431 M0R2T5 61 aa2.12□□□□□ -2.07
SRRM1-203ENST00000447431 HERC2O95714 4834 aa2.11□□□□□ -2.07
SRRM1-203ENST00000447431 ABCA13Q86UQ4 5058 aa2.09□□□□□ -2.07
SRRM1-203ENST00000447431 PKHD1L1Q86WI1 4243 aa2.09□□□□□ -2.07
SRRM1-203ENST00000447431 BIRC6Q9NR09 4857 aa2.09□□□□□ -2.07
SRRM1-203ENST00000447431 HERC1Q15751 4861 aa2.08□□□□□ -2.08
SRRM1-203ENST00000447431 PCLOQ9Y6V0 5065 aa2.07□□□□□ -2.08
SRRM1-203ENST00000447431 LCE1AQ5T7P2 110 aa2.06□□□□□ -2.08
SRRM1-203ENST00000447431 TNXBP22105 4242 aa2.05□□□□□ -2.08
SRRM1-203ENST00000447431 KRTAP5-3Q6L8H2 238 aa2.04□□□□□ -2.08
SRRM1-203ENST00000447431 LCE3AQ5TA76 89 aa2.03□□□□□ -2.08
SRRM1-203ENST00000447431 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
SRRM1-203ENST00000447431 LRP2P98164 4655 aa2.02□□□□□ -2.09
SRRM1-203ENST00000447431 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
SRRM1-203ENST00000447431 KRTAP10-10P60014 251 aa1.99□□□□□ -2.09
SRRM1-203ENST00000447431 KRTAP8-1Q8IUC2 63 aa1.99□□□□□ -2.09
SRRM1-203ENST00000447431 RNF213Q63HN8 5207 aa1.99□□□□□ -2.09
SRRM1-203ENST00000447431 UBR4Q5T4S7 5183 aa1.99□□□□□ -2.09
SRRM1-203ENST00000447431 LPAP08519 4548 aa1.98□□□□□ -2.09
SRRM1-203ENST00000447431 LCE3CQ5T5A8 94 aa1.98□□□□□ -2.09
SRRM1-203ENST00000447431 MUC2Q02817 5179 aa1.98□□□□□ -2.09
SRRM1-203ENST00000447431 KRTAP10-12P60413 245 aa1.97□□□□□ -2.09
SRRM1-203ENST00000447431 SPRR2GQ9BYE4 73 aa1.97□□□□□ -2.09
SRRM1-203ENST00000447431 KRTAP4-1Q9BYQ7 146 aa1.96□□□□□ -2.1
SRRM1-203ENST00000447431 KRTAP2-2Q9BYT5 123 aa1.91□□□□□ -2.1
SRRM1-203ENST00000447431 HMCN2Q8NDA2 5059 aa1.89□□□□□ -2.11
SRRM1-203ENST00000447431 FAT4Q6V0I7 4981 aa1.88□□□□□ -2.11
SRRM1-203ENST00000447431 KRTAP19-2Q3LHN2 52 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms