RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 DNAH8Q96JB1 4490 aa5.51□□□□□ -1.53
TOP3B-210ENST00000444502 DNAH2Q9P225 4427 aa5.5□□□□□ -1.53
TOP3B-210ENST00000444502 FAT1Q14517 4588 aa5.48□□□□□ -1.53
TOP3B-210ENST00000444502 KRTAP4-5Q9BYR2 181 aa5.47□□□□□ -1.53
TOP3B-210ENST00000444502 ALMS1Q8TCU4 4167 aa5.47□□□□□ -1.53
TOP3B-210ENST00000444502 KRTAP3-1Q9BYR8 98 aa5.42□□□□□ -1.54
TOP3B-210ENST00000444502 KRTAP10-4P60372 401 aaPredicted RBP5.41□□□□□ -1.54
TOP3B-210ENST00000444502 DYNC1H1Q14204 4646 aaKnown RBP5.41□□□□□ -1.54
TOP3B-210ENST00000444502 DYNC2H1Q8NCM8 4307 aaKnown RBP5.4□□□□□ -1.54
TOP3B-210ENST00000444502 DNAH6Q9C0G6 4158 aa5.39□□□□□ -1.55
TOP3B-210ENST00000444502 HECTD4Q9Y4D8 3996 aa5.39□□□□□ -1.55
TOP3B-210ENST00000444502 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
TOP3B-210ENST00000444502 PLAC4Q8WY50 150 aa5.37□□□□□ -1.55
TOP3B-210ENST00000444502 MT1HL1P0DM35 61 aa5.36□□□□□ -1.55
TOP3B-210ENST00000444502 HYDINQ4G0P3 5121 aa5.32□□□□□ -1.56
TOP3B-210ENST00000444502 VPS13BQ7Z7G8 4022 aa5.32□□□□□ -1.56
TOP3B-210ENST00000444502 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
TOP3B-210ENST00000444502 KRTAP13-4Q3LI77 160 aa5.26□□□□□ -1.57
TOP3B-210ENST00000444502 KIAA1109Q2LD37 5005 aa5.24□□□□□ -1.57
TOP3B-210ENST00000444502 KMT2CQ8NEZ4 4911 aaKnown RBP5.23□□□□□ -1.57
TOP3B-210ENST00000444502 MYCBP2O75592 4640 aa5.22□□□□□ -1.57
TOP3B-210ENST00000444502 KRTAP12-2P59991 146 aa5.22□□□□□ -1.57
TOP3B-210ENST00000444502 SACSQ9NZJ4 4579 aa5.22□□□□□ -1.57
TOP3B-210ENST00000444502 RYR3Q15413 4870 aa5.21□□□□□ -1.58
TOP3B-210ENST00000444502 PKHD1P08F94 4074 aa5.2□□□□□ -1.58
TOP3B-210ENST00000444502 FAT2Q9NYQ8 4349 aa5.19□□□□□ -1.58
TOP3B-210ENST00000444502 RYR1P21817 5038 aa5.19□□□□□ -1.58
TOP3B-210ENST00000444502 LRP1Q07954 4544 aaKnown RBP5.18□□□□□ -1.58
TOP3B-210ENST00000444502 APOBP04114 4563 aaKnown RBP5.18□□□□□ -1.58
TOP3B-210ENST00000444502 KRTAP10-6P60371 365 aaPredicted RBP5.15□□□□□ -1.58
TOP3B-210ENST00000444502 KRTAP3-3Q9BYR6 98 aa5.13□□□□□ -1.59
TOP3B-210ENST00000444502 KRTAP12-1P59990 96 aa5.08□□□□□ -1.6
TOP3B-210ENST00000444502 RYR2Q92736 4967 aa5.07□□□□□ -1.6
TOP3B-210ENST00000444502 PKD1P98161 4303 aa5.07□□□□□ -1.6
TOP3B-210ENST00000444502 FAT3Q8TDW7 4589 aa5.07□□□□□ -1.6
TOP3B-210ENST00000444502 KRTAP17-1Q9BYP8 105 aa5.06□□□□□ -1.6
TOP3B-210ENST00000444502 KRTAP3-2Q9BYR7 98 aa5.06□□□□□ -1.6
TOP3B-210ENST00000444502 TNP1P09430 55 aa5.05□□□□□ -1.6
TOP3B-210ENST00000444502 EPPK1P58107 5090 aaKnown RBP4.97□□□□□ -1.61
TOP3B-210ENST00000444502 LRP2P98164 4655 aa4.9□□□□□ -1.63
TOP3B-210ENST00000444502 HSPG2P98160 4391 aa4.89□□□□□ -1.63
TOP3B-210ENST00000444502 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
TOP3B-210ENST00000444502 KRTAP4-1Q9BYQ7 146 aa4.86□□□□□ -1.63
TOP3B-210ENST00000444502 HERC2O95714 4834 aa4.85□□□□□ -1.63
TOP3B-210ENST00000444502 LORP23490 312 aaPredicted RBP4.85□□□□□ -1.63
TOP3B-210ENST00000444502 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
TOP3B-210ENST00000444502 PCLOQ9Y6V0 5065 aa4.77□□□□□ -1.65
TOP3B-210ENST00000444502 PKHD1L1Q86WI1 4243 aa4.76□□□□□ -1.65
TOP3B-210ENST00000444502 LPAP08519 4548 aa4.76□□□□□ -1.65
TOP3B-210ENST00000444502 TNXBP22105 4242 aa4.72□□□□□ -1.65
TOP3B-210ENST00000444502 BIRC6Q9NR09 4857 aa4.66□□□□□ -1.66
TOP3B-210ENST00000444502 ABCA13Q86UQ4 5058 aa4.63□□□□□ -1.67
TOP3B-210ENST00000444502 MT1HP80294 61 aa4.59□□□□□ -1.68
TOP3B-210ENST00000444502 MT2AP02795 61 aa4.49□□□□□ -1.69
TOP3B-210ENST00000444502 INE1O15225 51 aa4.47□□□□□ -1.69
TOP3B-210ENST00000444502 HERC1Q15751 4861 aa4.46□□□□□ -1.7
TOP3B-210ENST00000444502 MT1FP04733 61 aa4.45□□□□□ -1.7
TOP3B-210ENST00000444502 MUC2Q02817 5179 aa4.45□□□□□ -1.7
TOP3B-210ENST00000444502 KRTAP10-12P60413 245 aa4.44□□□□□ -1.7
TOP3B-210ENST00000444502 FSIP2Q5CZC0 6907 aa4.42□□□□□ -1.7
TOP3B-210ENST00000444502 RNF213Q63HN8 5207 aa4.39□□□□□ -1.71
TOP3B-210ENST00000444502 KRTAP19-2Q3LHN2 52 aa4.38□□□□□ -1.71
TOP3B-210ENST00000444502 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
TOP3B-210ENST00000444502 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.71
TOP3B-210ENST00000444502 MUC17Q685J3 4493 aa4.33□□□□□ -1.72
TOP3B-210ENST00000444502 LCE2CQ5TA81 110 aa4.33□□□□□ -1.72
TOP3B-210ENST00000444502 UBR4Q5T4S7 5183 aa4.32□□□□□ -1.72
TOP3B-210ENST00000444502 CRCT1Q9UGL9 99 aa4.32□□□□□ -1.72
TOP3B-210ENST00000444502 KRTAP19-1Q8IUB9 90 aa4.31□□□□□ -1.72
TOP3B-210ENST00000444502 FAT4Q6V0I7 4981 aa4.31□□□□□ -1.72
TOP3B-210ENST00000444502 FLGP20930 4061 aaPredicted RBP4.29□□□□□ -1.72
TOP3B-210ENST00000444502 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
TOP3B-210ENST00000444502 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
TOP3B-210ENST00000444502 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
TOP3B-210ENST00000444502 HMCN2Q8NDA2 5059 aa4.22□□□□□ -1.73
TOP3B-210ENST00000444502 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
TOP3B-210ENST00000444502 KRTAP9-8Q9BYQ0 159 aa4.2□□□□□ -1.74
TOP3B-210ENST00000444502 MT1BP07438 61 aa4.11□□□□□ -1.75
TOP3B-210ENST00000444502 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
TOP3B-210ENST00000444502 MT1XP80297 61 aa4.07□□□□□ -1.76
TOP3B-210ENST00000444502 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
TOP3B-210ENST00000444502 SPRR2FQ96RM1 72 aa4.06□□□□□ -1.76
TOP3B-210ENST00000444502 KRTAP10-5P60370 271 aa4.05□□□□□ -1.76
TOP3B-210ENST00000444502 KRTAP9-3Q9BYQ3 159 aa4.05□□□□□ -1.76
TOP3B-210ENST00000444502 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
TOP3B-210ENST00000444502 LCE2BO14633 110 aa3.99□□□□□ -1.77
TOP3B-210ENST00000444502 KRTAP4-8A0A0G2JLE6 195 aa3.97□□□□□ -1.77
TOP3B-210ENST00000444502 KRTAP4-8Q9BYQ9 185 aa3.97□□□□□ -1.77
TOP3B-210ENST00000444502 LCE2AQ5TA79 106 aaPredicted RBP3.88□□□□□ -1.79
TOP3B-210ENST00000444502 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
TOP3B-210ENST00000444502 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
TOP3B-210ENST00000444502 KRTAP9-2Q9BYQ4 174 aa3.81□□□□□ -1.8
TOP3B-210ENST00000444502 USH2AO75445 5202 aa3.81□□□□□ -1.8
TOP3B-210ENST00000444502 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
TOP3B-210ENST00000444502 SPRR2EP22531 72 aa3.77□□□□□ -1.81
TOP3B-210ENST00000444502 SPRR2BP35325 72 aa3.77□□□□□ -1.81
TOP3B-210ENST00000444502 SPRR2AP35326 72 aa3.77□□□□□ -1.81
TOP3B-210ENST00000444502 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
TOP3B-210ENST00000444502 KMT2DO14686 5537 aa3.7□□□□□ -1.82
TOP3B-210ENST00000444502 MT1GP13640 62 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms