RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 FRAS1Q86XX4 4008 aa10.37□□□□□ -0.75
FMR1-208ENST00000440235 TNP1P09430 55 aa10.36□□□□□ -0.75
FMR1-208ENST00000440235 KRTAP12-2P59991 146 aa10.34□□□□□ -0.75
FMR1-208ENST00000440235 LRP1BQ9NZR2 4599 aa10.33□□□□□ -0.76
FMR1-208ENST00000440235 HECTD4Q9Y4D8 3996 aa10.32□□□□□ -0.76
FMR1-208ENST00000440235 TPRXLQ17RH7 258 aa10.29□□□□□ -0.76
FMR1-208ENST00000440235 DNAH5Q8TE73 4624 aa10.29□□□□□ -0.76
FMR1-208ENST00000440235 DNAH6Q9C0G6 4158 aa10.27□□□□□ -0.77
FMR1-208ENST00000440235 KRTAP13-4Q3LI77 160 aa10.22□□□□□ -0.77
FMR1-208ENST00000440235 ALMS1Q8TCU4 4167 aa10.19□□□□□ -0.78
FMR1-208ENST00000440235 FAT1Q14517 4588 aa10.14□□□□□ -0.79
FMR1-208ENST00000440235 KRTAP12-1P59990 96 aa10.1□□□□□ -0.79
FMR1-208ENST00000440235 HYDINQ4G0P3 5121 aa10.08□□□□□ -0.8
FMR1-208ENST00000440235 DYNC1H1Q14204 4646 aaKnown RBP10.07□□□□□ -0.8
FMR1-208ENST00000440235 VPS13BQ7Z7G8 4022 aa10.07□□□□□ -0.8
FMR1-208ENST00000440235 KRTAP10-4P60372 401 aaPredicted RBP10.07□□□□□ -0.8
FMR1-208ENST00000440235 KRTAP10-6P60371 365 aaPredicted RBP10.04□□□□□ -0.8
FMR1-208ENST00000440235 PP632Q6XCG6 107 aa9.99□□□□□ -0.81
FMR1-208ENST00000440235 PKHD1P08F94 4074 aa9.89□□□□□ -0.83
FMR1-208ENST00000440235 KRTAP10-10P60014 251 aa9.88□□□□□ -0.83
FMR1-208ENST00000440235 SACSQ9NZJ4 4579 aa9.84□□□□□ -0.83
FMR1-208ENST00000440235 FAT2Q9NYQ8 4349 aa9.83□□□□□ -0.84
FMR1-208ENST00000440235 PKD1P98161 4303 aa9.75□□□□□ -0.85
FMR1-208ENST00000440235 KRTAP3-3Q9BYR6 98 aa9.73□□□□□ -0.85
FMR1-208ENST00000440235 KRTAP3-2Q9BYR7 98 aa9.73□□□□□ -0.85
FMR1-208ENST00000440235 MT1HL1P0DM35 61 aa9.69□□□□□ -0.86
FMR1-208ENST00000440235 APOBP04114 4563 aaKnown RBP9.68□□□□□ -0.86
FMR1-208ENST00000440235 LRP1Q07954 4544 aaKnown RBP9.64□□□□□ -0.87
FMR1-208ENST00000440235 MYCBP2O75592 4640 aa9.64□□□□□ -0.87
FMR1-208ENST00000440235 KIAA1109Q2LD37 5005 aa9.56□□□□□ -0.88
FMR1-208ENST00000440235 RYR2Q92736 4967 aa9.55□□□□□ -0.88
FMR1-208ENST00000440235 KMT2CQ8NEZ4 4911 aaKnown RBP9.54□□□□□ -0.88
FMR1-208ENST00000440235 KRTAP4-5Q9BYR2 181 aa9.51□□□□□ -0.89
FMR1-208ENST00000440235 KRTAP15-1Q3LI76 137 aa9.49□□□□□ -0.89
FMR1-208ENST00000440235 RYR3Q15413 4870 aa9.46□□□□□ -0.9
FMR1-208ENST00000440235 RYR1P21817 5038 aa9.45□□□□□ -0.9
FMR1-208ENST00000440235 KRTAP17-1Q9BYP8 105 aa9.39□□□□□ -0.91
FMR1-208ENST00000440235 FAT3Q8TDW7 4589 aa9.36□□□□□ -0.91
FMR1-208ENST00000440235 LORP23490 312 aaPredicted RBP9.33□□□□□ -0.92
FMR1-208ENST00000440235 HSPG2P98160 4391 aa9.26□□□□□ -0.93
FMR1-208ENST00000440235 PRO2289Q9P1D8 64 aa9.19□□□□□ -0.94
FMR1-208ENST00000440235 PKHD1L1Q86WI1 4243 aa9.14□□□□□ -0.95
FMR1-208ENST00000440235 LRP2P98164 4655 aa9.11□□□□□ -0.95
FMR1-208ENST00000440235 TNXBP22105 4242 aa9.03□□□□□ -0.96
FMR1-208ENST00000440235 KRTAP4-1Q9BYQ7 146 aa8.94□□□□□ -0.98
FMR1-208ENST00000440235 EPPK1P58107 5090 aaKnown RBP8.93□□□□□ -0.98
FMR1-208ENST00000440235 LPAP08519 4548 aa8.91□□□□□ -0.98
FMR1-208ENST00000440235 HERC2O95714 4834 aa8.82□□□□□ -1
FMR1-208ENST00000440235 LCE3AQ5TA76 89 aa8.78□□□□□ -1
FMR1-208ENST00000440235 KRTAP10-12P60413 245 aa8.71□□□□□ -1.01
FMR1-208ENST00000440235 CRCT1Q9UGL9 99 aa8.69□□□□□ -1.02
FMR1-208ENST00000440235 ABCA13Q86UQ4 5058 aa8.66□□□□□ -1.02
FMR1-208ENST00000440235 KRTAP12-3P60328 96 aa8.65□□□□□ -1.02
FMR1-208ENST00000440235 BIRC6Q9NR09 4857 aa8.42□□□□□ -1.06
FMR1-208ENST00000440235 INE1O15225 51 aa8.41□□□□□ -1.06
FMR1-208ENST00000440235 MUC2Q02817 5179 aa8.32□□□□□ -1.08
FMR1-208ENST00000440235 HERC1Q15751 4861 aa8.23□□□□□ -1.09
FMR1-208ENST00000440235 KRTAP19-2Q3LHN2 52 aa8.22□□□□□ -1.09
FMR1-208ENST00000440235 KRTAP23-1A1A580 65 aa8.22□□□□□ -1.09
FMR1-208ENST00000440235 MT1HP80294 61 aa8.19□□□□□ -1.1
FMR1-208ENST00000440235 MUC17Q685J3 4493 aa8.16□□□□□ -1.1
FMR1-208ENST00000440235 MT2AP02795 61 aa8.1□□□□□ -1.11
FMR1-208ENST00000440235 MT1FP04733 61 aa8.07□□□□□ -1.12
FMR1-208ENST00000440235 FLGP20930 4061 aaPredicted RBP8.06□□□□□ -1.12
FMR1-208ENST00000440235 SPRR2GQ9BYE4 73 aa8.04□□□□□ -1.12
FMR1-208ENST00000440235 LCE2CQ5TA81 110 aa8.04□□□□□ -1.12
FMR1-208ENST00000440235 PCLOQ9Y6V0 5065 aa8.04□□□□□ -1.12
FMR1-208ENST00000440235 KRTAP10-5P60370 271 aa8.03□□□□□ -1.12
FMR1-208ENST00000440235 FAT4Q6V0I7 4981 aa8.02□□□□□ -1.13
FMR1-208ENST00000440235 RNF213Q63HN8 5207 aa7.98□□□□□ -1.13
FMR1-208ENST00000440235 KRTAP19-1Q8IUB9 90 aa7.97□□□□□ -1.13
FMR1-208ENST00000440235 SYNE1Q8NF91 8797 aaKnown RBP7.97□□□□□ -1.13
FMR1-208ENST00000440235 HMCN2Q8NDA2 5059 aa7.93□□□□□ -1.14
FMR1-208ENST00000440235 OBSCNQ5VST9 7968 aa7.91□□□□□ -1.14
FMR1-208ENST00000440235 UBR4Q5T4S7 5183 aa7.84□□□□□ -1.15
FMR1-208ENST00000440235 KRTAP19-5Q3LI72 72 aa7.83□□□□□ -1.16
FMR1-208ENST00000440235 KRTAP8-1Q8IUC2 63 aa7.79□□□□□ -1.16
FMR1-208ENST00000440235 KRTAP9-8Q9BYQ0 159 aa7.77□□□□□ -1.17
FMR1-208ENST00000440235 FSIP2Q5CZC0 6907 aa7.76□□□□□ -1.17
FMR1-208ENST00000440235 KRTAP10-7P60409 375 aaPredicted RBP7.75□□□□□ -1.17
FMR1-208ENST00000440235 KRTAP19-8Q3LI54 63 aa7.62□□□□□ -1.19
FMR1-208ENST00000440235 LCE3CQ5T5A8 94 aa7.61□□□□□ -1.19
FMR1-208ENST00000440235 MT1BP07438 61 aa7.59□□□□□ -1.19
FMR1-208ENST00000440235 MT1XP80297 61 aa7.54□□□□□ -1.2
FMR1-208ENST00000440235 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
FMR1-208ENST00000440235 KRTAP4-8Q9BYQ9 185 aa7.51□□□□□ -1.21
FMR1-208ENST00000440235 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.21
FMR1-208ENST00000440235 SPRR5A0A1B0GTR4 108 aa7.38□□□□□ -1.23
FMR1-208ENST00000440235 SPRR2FQ96RM1 72 aa7.32□□□□□ -1.24
FMR1-208ENST00000440235 KRTAP4-7Q9BYR0 210 aa7.29□□□□□ -1.24
FMR1-208ENST00000440235 LCE2BO14633 110 aa7.24□□□□□ -1.25
FMR1-208ENST00000440235 MT1GP13640 62 aa7.17□□□□□ -1.26
FMR1-208ENST00000440235 LCE3BQ5TA77 95 aa7.15□□□□□ -1.27
FMR1-208ENST00000440235 KRTAP12-4P60329 112 aa7.13□□□□□ -1.27
FMR1-208ENST00000440235 USH2AO75445 5202 aa7.06□□□□□ -1.28
FMR1-208ENST00000440235 FCGBPQ9Y6R7 5405 aaPredicted RBP7.05□□□□□ -1.28
FMR1-208ENST00000440235 DSTQ03001 7570 aaKnown RBP7.04□□□□□ -1.28
FMR1-208ENST00000440235 LCE2AQ5TA79 106 aaPredicted RBP6.98□□□□□ -1.29
FMR1-208ENST00000440235 KMT2DO14686 5537 aa6.86□□□□□ -1.31
FMR1-208ENST00000440235 LOC100996750A0A140TA64 210 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms