RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 DNHD1Q96M86 4753 aa6.7□□□□□ -1.34
TSC2-206ENST00000439117 DNAH5Q8TE73 4624 aa6.69□□□□□ -1.34
TSC2-206ENST00000439117 PLECQ15149 4684 aaKnown RBP6.58□□□□□ -1.36
TSC2-206ENST00000439117 CSMD3Q7Z407 3707 aa6.56□□□□□ -1.36
TSC2-206ENST00000439117 DNAH1Q9P2D7 4330 aa6.55□□□□□ -1.36
TSC2-206ENST00000439117 KRTAP10-12P60413 245 aa6.53□□□□□ -1.36
TSC2-206ENST00000439117 DNAH11Q96DT5 4516 aa6.53□□□□□ -1.36
TSC2-206ENST00000439117 DNAH10Q8IVF4 4471 aa6.48□□□□□ -1.37
TSC2-206ENST00000439117 KRTAP12-3P60328 96 aa6.47□□□□□ -1.37
TSC2-206ENST00000439117 VPS13DQ5THJ4 4388 aa6.47□□□□□ -1.37
TSC2-206ENST00000439117 DYNC1H1Q14204 4646 aaKnown RBP6.41□□□□□ -1.38
TSC2-206ENST00000439117 DNAH17Q9UFH2 4485 aa6.4□□□□□ -1.38
TSC2-206ENST00000439117 LCE3AQ5TA76 89 aa6.36□□□□□ -1.39
TSC2-206ENST00000439117 LRP1BQ9NZR2 4599 aa6.34□□□□□ -1.39
TSC2-206ENST00000439117 FAT1Q14517 4588 aa6.33□□□□□ -1.4
TSC2-206ENST00000439117 STARD9Q9P2P6 4700 aa6.33□□□□□ -1.4
TSC2-206ENST00000439117 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
TSC2-206ENST00000439117 RYR1P21817 5038 aa6.28□□□□□ -1.4
TSC2-206ENST00000439117 KRTAP4-1Q9BYQ7 146 aa6.28□□□□□ -1.4
TSC2-206ENST00000439117 PRKDCP78527 4128 aaKnown RBP6.26□□□□□ -1.41
TSC2-206ENST00000439117 DNAH2Q9P225 4427 aa6.23□□□□□ -1.41
TSC2-206ENST00000439117 DYNC2H1Q8NCM8 4307 aaKnown RBP6.18□□□□□ -1.42
TSC2-206ENST00000439117 CRCT1Q9UGL9 99 aa6.18□□□□□ -1.42
TSC2-206ENST00000439117 FAT2Q9NYQ8 4349 aa6.18□□□□□ -1.42
TSC2-206ENST00000439117 ANK2Q01484 3957 aa6.17□□□□□ -1.42
TSC2-206ENST00000439117 SACSQ9NZJ4 4579 aa6.17□□□□□ -1.42
TSC2-206ENST00000439117 MT1HP80294 61 aa6.14□□□□□ -1.43
TSC2-206ENST00000439117 DNAH3Q8TD57 4116 aa6.1□□□□□ -1.43
TSC2-206ENST00000439117 DNAH8Q96JB1 4490 aa6.08□□□□□ -1.44
TSC2-206ENST00000439117 KIAA1109Q2LD37 5005 aa6.08□□□□□ -1.44
TSC2-206ENST00000439117 MT2AP02795 61 aa6.04□□□□□ -1.44
TSC2-206ENST00000439117 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
TSC2-206ENST00000439117 KMT2AQ03164 3969 aa6.02□□□□□ -1.45
TSC2-206ENST00000439117 RYR3Q15413 4870 aa6.02□□□□□ -1.45
TSC2-206ENST00000439117 APOBP04114 4563 aaKnown RBP6□□□□□ -1.45
TSC2-206ENST00000439117 SPRR2GQ9BYE4 73 aa5.96□□□□□ -1.45
TSC2-206ENST00000439117 KRTAP17-1Q9BYP8 105 aa5.96□□□□□ -1.45
TSC2-206ENST00000439117 KRTAP8-1Q8IUC2 63 aa5.95□□□□□ -1.46
TSC2-206ENST00000439117 VPS13BQ7Z7G8 4022 aa5.93□□□□□ -1.46
TSC2-206ENST00000439117 LYSTQ99698 3801 aa5.92□□□□□ -1.46
TSC2-206ENST00000439117 MT1FP04733 61 aa5.92□□□□□ -1.46
TSC2-206ENST00000439117 MYCBP2O75592 4640 aa5.88□□□□□ -1.47
TSC2-206ENST00000439117 RYR2Q92736 4967 aa5.87□□□□□ -1.47
TSC2-206ENST00000439117 DNAH6Q9C0G6 4158 aa5.84□□□□□ -1.48
TSC2-206ENST00000439117 CMYA5Q8N3K9 4069 aa5.8□□□□□ -1.48
TSC2-206ENST00000439117 LRP1Q07954 4544 aaKnown RBP5.79□□□□□ -1.48
TSC2-206ENST00000439117 FAT3Q8TDW7 4589 aa5.77□□□□□ -1.49
TSC2-206ENST00000439117 HERC2O95714 4834 aa5.75□□□□□ -1.49
TSC2-206ENST00000439117 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
TSC2-206ENST00000439117 BIRC6Q9NR09 4857 aa5.7□□□□□ -1.5
TSC2-206ENST00000439117 DNAH7Q8WXX0 4024 aa5.69□□□□□ -1.5
TSC2-206ENST00000439117 LCE3CQ5T5A8 94 aa5.67□□□□□ -1.5
TSC2-206ENST00000439117 HECTD4Q9Y4D8 3996 aa5.64□□□□□ -1.51
TSC2-206ENST00000439117 KRTAP19-1Q8IUB9 90 aa5.62□□□□□ -1.51
TSC2-206ENST00000439117 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
TSC2-206ENST00000439117 HYDINQ4G0P3 5121 aa5.6□□□□□ -1.51
TSC2-206ENST00000439117 FRAS1Q86XX4 4008 aa5.58□□□□□ -1.52
TSC2-206ENST00000439117 KRTAP19-5Q3LI72 72 aa5.57□□□□□ -1.52
TSC2-206ENST00000439117 HSPG2P98160 4391 aa5.57□□□□□ -1.52
TSC2-206ENST00000439117 SPRR5A0A1B0GTR4 108 aa5.57□□□□□ -1.52
TSC2-206ENST00000439117 SPRR2FQ96RM1 72 aa5.57□□□□□ -1.52
TSC2-206ENST00000439117 LRP2P98164 4655 aa5.53□□□□□ -1.52
TSC2-206ENST00000439117 PCLOQ9Y6V0 5065 aa5.5□□□□□ -1.53
TSC2-206ENST00000439117 KRTAP9-8Q9BYQ0 159 aa5.49□□□□□ -1.53
TSC2-206ENST00000439117 LCE2CQ5TA81 110 aa5.49□□□□□ -1.53
TSC2-206ENST00000439117 HERC1Q15751 4861 aa5.48□□□□□ -1.53
TSC2-206ENST00000439117 PKD1P98161 4303 aa5.48□□□□□ -1.53
TSC2-206ENST00000439117 PKHD1P08F94 4074 aa5.48□□□□□ -1.53
TSC2-206ENST00000439117 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
TSC2-206ENST00000439117 MT1BP07438 61 aa5.42□□□□□ -1.54
TSC2-206ENST00000439117 MT1XP80297 61 aa5.41□□□□□ -1.54
TSC2-206ENST00000439117 KMT2CQ8NEZ4 4911 aaKnown RBP5.38□□□□□ -1.55
TSC2-206ENST00000439117 KRTAP9-3Q9BYQ3 159 aa5.36□□□□□ -1.55
TSC2-206ENST00000439117 PKHD1L1Q86WI1 4243 aa5.34□□□□□ -1.56
TSC2-206ENST00000439117 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
TSC2-206ENST00000439117 KRTAP19-2Q3LHN2 52 aa5.28□□□□□ -1.56
TSC2-206ENST00000439117 LPAP08519 4548 aa5.25□□□□□ -1.57
TSC2-206ENST00000439117 SPRR2EP22531 72 aa5.22□□□□□ -1.57
TSC2-206ENST00000439117 SPRR2BP35325 72 aa5.22□□□□□ -1.57
TSC2-206ENST00000439117 SPRR2AP35326 72 aa5.22□□□□□ -1.57
TSC2-206ENST00000439117 EPPK1P58107 5090 aaKnown RBP5.19□□□□□ -1.58
TSC2-206ENST00000439117 ABCA13Q86UQ4 5058 aa5.19□□□□□ -1.58
TSC2-206ENST00000439117 KRTAP4-8A0A0G2JLE6 195 aa5.17□□□□□ -1.58
TSC2-206ENST00000439117 KRTAP4-8Q9BYQ9 185 aa5.17□□□□□ -1.58
TSC2-206ENST00000439117 TNXBP22105 4242 aa5.15□□□□□ -1.58
TSC2-206ENST00000439117 MUC17Q685J3 4493 aa5.14□□□□□ -1.59
TSC2-206ENST00000439117 LCE2BO14633 110 aa5.13□□□□□ -1.59
TSC2-206ENST00000439117 LCE3BQ5TA77 95 aa5.12□□□□□ -1.59
TSC2-206ENST00000439117 MT1GP13640 62 aa5.08□□□□□ -1.6
TSC2-206ENST00000439117 FLGP20930 4061 aaPredicted RBP5.06□□□□□ -1.6
TSC2-206ENST00000439117 SPRR2DP22532 72 aa5.05□□□□□ -1.6
TSC2-206ENST00000439117 LCE3DQ9BYE3 92 aa5.03□□□□□ -1.6
TSC2-206ENST00000439117 LCE3EQ5T5B0 92 aa5□□□□□ -1.61
TSC2-206ENST00000439117 UBR4Q5T4S7 5183 aa4.97□□□□□ -1.61
TSC2-206ENST00000439117 FAT4Q6V0I7 4981 aa4.94□□□□□ -1.62
TSC2-206ENST00000439117 RNF213Q63HN8 5207 aa4.93□□□□□ -1.62
TSC2-206ENST00000439117 KRTAP19-3Q7Z4W3 81 aa4.92□□□□□ -1.62
TSC2-206ENST00000439117 LCE2AQ5TA79 106 aaPredicted RBP4.91□□□□□ -1.62
TSC2-206ENST00000439117 KRTAP19-6Q3LI70 58 aa4.9□□□□□ -1.63
TSC2-206ENST00000439117 MT1LQ93083 61 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms