RNA–Protein interactions for RNA: ENST00000436881.2

C9orf172-201, Transcript of Uncharacterized protein C9orf172, humanhuman

APPRIS P1 BASIC

Gene C9orf172, Length 4,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf172-201ENST00000436881 DNAH3Q8TD57 4116 aa7.82□□□□□ -1.16
C9orf172-201ENST00000436881 KRTAP12-2P59991 146 aa7.81□□□□□ -1.16
C9orf172-201ENST00000436881 CMYA5Q8N3K9 4069 aa7.81□□□□□ -1.16
C9orf172-201ENST00000436881 MT1HL1P0DM35 61 aa7.78□□□□□ -1.16
C9orf172-201ENST00000436881 KRTAP10-4P60372 401 aaPredicted RBP7.77□□□□□ -1.17
C9orf172-201ENST00000436881 ALMS1Q8TCU4 4167 aa7.75□□□□□ -1.17
C9orf172-201ENST00000436881 FRAS1Q86XX4 4008 aa7.74□□□□□ -1.17
C9orf172-201ENST00000436881 KRTAP12-1P59990 96 aa7.73□□□□□ -1.17
C9orf172-201ENST00000436881 DNAH2Q9P225 4427 aa7.71□□□□□ -1.17
C9orf172-201ENST00000436881 LRP1BQ9NZR2 4599 aa7.69□□□□□ -1.18
C9orf172-201ENST00000436881 KRTAP3-3Q9BYR6 98 aa7.69□□□□□ -1.18
C9orf172-201ENST00000436881 KMT2AQ03164 3969 aa7.69□□□□□ -1.18
C9orf172-201ENST00000436881 KRTAP3-2Q9BYR7 98 aa7.67□□□□□ -1.18
C9orf172-201ENST00000436881 DNAH7Q8WXX0 4024 aa7.67□□□□□ -1.18
C9orf172-201ENST00000436881 PRO2289Q9P1D8 64 aa7.66□□□□□ -1.18
C9orf172-201ENST00000436881 DNAH5Q8TE73 4624 aa7.63□□□□□ -1.19
C9orf172-201ENST00000436881 PRKDCP78527 4128 aaKnown RBP7.6□□□□□ -1.19
C9orf172-201ENST00000436881 HECTD4Q9Y4D8 3996 aa7.58□□□□□ -1.2
C9orf172-201ENST00000436881 DYNC2H1Q8NCM8 4307 aaKnown RBP7.56□□□□□ -1.2
C9orf172-201ENST00000436881 KIAA1109Q2LD37 5005 aa7.51□□□□□ -1.21
C9orf172-201ENST00000436881 DNAH6Q9C0G6 4158 aa7.49□□□□□ -1.21
C9orf172-201ENST00000436881 FAT1Q14517 4588 aa7.48□□□□□ -1.21
C9orf172-201ENST00000436881 VPS13BQ7Z7G8 4022 aa7.47□□□□□ -1.21
C9orf172-201ENST00000436881 KRTAP15-1Q3LI76 137 aa7.45□□□□□ -1.22
C9orf172-201ENST00000436881 RYR1P21817 5038 aa7.43□□□□□ -1.22
C9orf172-201ENST00000436881 DYNC1H1Q14204 4646 aaKnown RBP7.4□□□□□ -1.23
C9orf172-201ENST00000436881 SACSQ9NZJ4 4579 aa7.35□□□□□ -1.23
C9orf172-201ENST00000436881 RYR3Q15413 4870 aa7.34□□□□□ -1.23
C9orf172-201ENST00000436881 HYDINQ4G0P3 5121 aa7.34□□□□□ -1.23
C9orf172-201ENST00000436881 MYCBP2O75592 4640 aa7.19□□□□□ -1.26
C9orf172-201ENST00000436881 FAT2Q9NYQ8 4349 aa7.18□□□□□ -1.26
C9orf172-201ENST00000436881 BIRC6Q9NR09 4857 aa7.11□□□□□ -1.27
C9orf172-201ENST00000436881 HERC2O95714 4834 aa7.1□□□□□ -1.27
C9orf172-201ENST00000436881 LORP23490 312 aaPredicted RBP7.1□□□□□ -1.27
C9orf172-201ENST00000436881 KRTAP17-1Q9BYP8 105 aa7.08□□□□□ -1.28
C9orf172-201ENST00000436881 APOBP04114 4563 aaKnown RBP7.08□□□□□ -1.28
C9orf172-201ENST00000436881 PKHD1P08F94 4074 aa7.06□□□□□ -1.28
C9orf172-201ENST00000436881 LRP1Q07954 4544 aaKnown RBP7.05□□□□□ -1.28
C9orf172-201ENST00000436881 KMT2CQ8NEZ4 4911 aaKnown RBP7.05□□□□□ -1.28
C9orf172-201ENST00000436881 PKD1P98161 4303 aa7.01□□□□□ -1.29
C9orf172-201ENST00000436881 RYR2Q92736 4967 aa7□□□□□ -1.29
C9orf172-201ENST00000436881 FAT3Q8TDW7 4589 aa6.96□□□□□ -1.29
C9orf172-201ENST00000436881 KRTAP10-12P60413 245 aa6.92□□□□□ -1.3
C9orf172-201ENST00000436881 KRTAP4-1Q9BYQ7 146 aa6.9□□□□□ -1.3
C9orf172-201ENST00000436881 KRTAP23-1A1A580 65 aa6.9□□□□□ -1.31
C9orf172-201ENST00000436881 PCLOQ9Y6V0 5065 aa6.83□□□□□ -1.32
C9orf172-201ENST00000436881 EPPK1P58107 5090 aaKnown RBP6.76□□□□□ -1.33
C9orf172-201ENST00000436881 KRTAP12-3P60328 96 aa6.76□□□□□ -1.33
C9orf172-201ENST00000436881 LRP2P98164 4655 aa6.75□□□□□ -1.33
C9orf172-201ENST00000436881 HSPG2P98160 4391 aa6.75□□□□□ -1.33
C9orf172-201ENST00000436881 PKHD1L1Q86WI1 4243 aa6.75□□□□□ -1.33
C9orf172-201ENST00000436881 LCE3AQ5TA76 89 aa6.72□□□□□ -1.33
C9orf172-201ENST00000436881 MT1HP80294 61 aa6.64□□□□□ -1.35
C9orf172-201ENST00000436881 SPRR2GQ9BYE4 73 aa6.6□□□□□ -1.35
C9orf172-201ENST00000436881 TNXBP22105 4242 aa6.59□□□□□ -1.35
C9orf172-201ENST00000436881 MT2AP02795 61 aa6.58□□□□□ -1.36
C9orf172-201ENST00000436881 ABCA13Q86UQ4 5058 aa6.54□□□□□ -1.36
C9orf172-201ENST00000436881 LPAP08519 4548 aa6.5□□□□□ -1.37
C9orf172-201ENST00000436881 INE1O15225 51 aa6.5□□□□□ -1.37
C9orf172-201ENST00000436881 MT1FP04733 61 aa6.46□□□□□ -1.38
C9orf172-201ENST00000436881 UBR4Q5T4S7 5183 aa6.44□□□□□ -1.38
C9orf172-201ENST00000436881 HERC1Q15751 4861 aa6.43□□□□□ -1.38
C9orf172-201ENST00000436881 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.38
C9orf172-201ENST00000436881 FSIP2Q5CZC0 6907 aa6.39□□□□□ -1.39
C9orf172-201ENST00000436881 KRTAP8-1Q8IUC2 63 aa6.32□□□□□ -1.4
C9orf172-201ENST00000436881 KRTAP19-1Q8IUB9 90 aa6.27□□□□□ -1.41
C9orf172-201ENST00000436881 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
C9orf172-201ENST00000436881 RNF213Q63HN8 5207 aa6.18□□□□□ -1.42
C9orf172-201ENST00000436881 KRTAP19-2Q3LHN2 52 aa6.18□□□□□ -1.42
C9orf172-201ENST00000436881 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
C9orf172-201ENST00000436881 MUC17Q685J3 4493 aa6.09□□□□□ -1.43
C9orf172-201ENST00000436881 KRTAP19-5Q3LI72 72 aa6.09□□□□□ -1.43
C9orf172-201ENST00000436881 KRTAP9-2Q9BYQ4 174 aa6.07□□□□□ -1.44
C9orf172-201ENST00000436881 LCE2CQ5TA81 110 aa6.07□□□□□ -1.44
C9orf172-201ENST00000436881 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
C9orf172-201ENST00000436881 FLGP20930 4061 aaPredicted RBP6.02□□□□□ -1.45
C9orf172-201ENST00000436881 KRTAP19-4Q3LI73 84 aa6□□□□□ -1.45
C9orf172-201ENST00000436881 MT1BP07438 61 aa6□□□□□ -1.45
C9orf172-201ENST00000436881 MT1XP80297 61 aa5.99□□□□□ -1.45
C9orf172-201ENST00000436881 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
C9orf172-201ENST00000436881 LCE3CQ5T5A8 94 aa5.98□□□□□ -1.45
C9orf172-201ENST00000436881 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
C9orf172-201ENST00000436881 SPRR2FQ96RM1 72 aa5.97□□□□□ -1.45
C9orf172-201ENST00000436881 FAT4Q6V0I7 4981 aa5.92□□□□□ -1.46
C9orf172-201ENST00000436881 MUC2Q02817 5179 aa5.92□□□□□ -1.46
C9orf172-201ENST00000436881 HMCN2Q8NDA2 5059 aa5.89□□□□□ -1.47
C9orf172-201ENST00000436881 KRTAP9-3Q9BYQ3 159 aa5.88□□□□□ -1.47
C9orf172-201ENST00000436881 KRTAP9-6A0A140TA67 174 aa5.83□□□□□ -1.48
C9orf172-201ENST00000436881 LCE2AQ5TA79 106 aaPredicted RBP5.8□□□□□ -1.48
C9orf172-201ENST00000436881 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
C9orf172-201ENST00000436881 LCE2BO14633 110 aa5.68□□□□□ -1.5
C9orf172-201ENST00000436881 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
C9orf172-201ENST00000436881 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
C9orf172-201ENST00000436881 SPRR2EP22531 72 aa5.66□□□□□ -1.5
C9orf172-201ENST00000436881 SPRR2BP35325 72 aa5.66□□□□□ -1.5
C9orf172-201ENST00000436881 SPRR2AP35326 72 aa5.66□□□□□ -1.5
C9orf172-201ENST00000436881 LCE2DQ5TA82 110 aaPredicted RBP5.59□□□□□ -1.51
C9orf172-201ENST00000436881 OBSCNQ5VST9 7968 aa5.59□□□□□ -1.52
C9orf172-201ENST00000436881 MT1GP13640 62 aa5.53□□□□□ -1.52
C9orf172-201ENST00000436881 SPRR2DP22532 72 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms