RNA–Protein interactions for RNA: ENST00000435815.1

SNRPEP4-201, Transcript of small nuclear ribonucleoprotein polypeptide E pseudogene 4, humanhuman

BASIC

Gene SNRPEP4, Length 279 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP4-201ENST00000435815 DNAH7Q8WXX0 4024 aa0.58□□□□□ -2.32
SNRPEP4-201ENST00000435815 SETD2Q9BYW2 2564 aaPredicted RBP0.58□□□□□ -2.32
SNRPEP4-201ENST00000435815 GPR98Q8WXG9 6306 aa0.58□□□□□ -2.32
SNRPEP4-201ENST00000435815 PTPN13Q12923 2485 aa0.58□□□□□ -2.32
SNRPEP4-201ENST00000435815 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
SNRPEP4-201ENST00000435815 HTTP42858 3142 aa0.58□□□□□ -2.32
SNRPEP4-201ENST00000435815 SETXQ7Z333 2677 aaKnown RBP0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 CELSR3Q9NYQ7 3312 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 DNAH6Q9C0G6 4158 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 TACC2O95359 2948 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 DNAH2Q9P225 4427 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 ACACAQ13085 2346 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 H3BUX3 64 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 M0QZ58 72 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 STAB1Q9NY15 2570 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 DMXL1Q9Y485 3027 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 LAMA1P25391 3075 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 GCN1Q92616 2671 aaKnown RBP0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 COL7A1Q02388 2944 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 APC2O95996 2303 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 DNAH8Q96JB1 4490 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 TRIOO75962 3097 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 SVEP1Q4LDE5 3571 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 COL6A5A8TX70 2615 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 TENM2Q9NT68 2774 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 C9orf92A6NGG3 77 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 DEFB4AO15263 64 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 HTN3P15516 51 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 SPRR2DP22532 72 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 COL12A1Q99715 3063 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 DNAH10Q8IVF4 4471 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 LPAP08519 4548 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 FRYQ5TBA9 3013 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 DYNC2H1Q8NCM8 4307 aaKnown RBP0.55□□□□□ -2.32
SNRPEP4-201ENST00000435815 NBEAQ8NFP9 2946 aa0.55□□□□□ -2.32
SNRPEP4-201ENST00000435815 DMXL2Q8TDJ6 3036 aa0.55□□□□□ -2.32
SNRPEP4-201ENST00000435815 FLNCQ14315 2725 aa0.55□□□□□ -2.32
SNRPEP4-201ENST00000435815 AHNAKQ09666 5890 aaKnown RBP0.55□□□□□ -2.32
SNRPEP4-201ENST00000435815 DMBT1Q9UGM3 2413 aaPredicted RBP0.55□□□□□ -2.32
SNRPEP4-201ENST00000435815 CSMD2Q7Z408 3487 aa0.55□□□□□ -2.32
SNRPEP4-201ENST00000435815 SPTBN4Q9H254 2564 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 MUC3AQ02505 3323 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 KALRNO60229 2985 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 MUC5BQ9HC84 5762 aaPredicted RBP0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 HRNRQ86YZ3 2850 aaPredicted RBP0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 DCHS2Q6V1P9 2916 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 H3BNG1 76 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 CRYBG3Q68DQ2 2970 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 ATMQ13315 3056 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 DNAH17Q9UFH2 4485 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 NSD1Q96L73 2696 aaPredicted RBP0.53□□□□□ -2.32
SNRPEP4-201ENST00000435815 DNAH9Q9NYC9 4486 aa0.53□□□□□ -2.32
SNRPEP4-201ENST00000435815 APOBP04114 4563 aaKnown RBP0.53□□□□□ -2.32
SNRPEP4-201ENST00000435815 FAM186AA6NE01 2351 aa0.53□□□□□ -2.33
SNRPEP4-201ENST00000435815 EYSQ5T1H1 3165 aa0.53□□□□□ -2.33
SNRPEP4-201ENST00000435815 TENM3Q9P273 2699 aa0.52□□□□□ -2.33
SNRPEP4-201ENST00000435815 CCDC168Q8NDH2 2452 aa0.52□□□□□ -2.33
SNRPEP4-201ENST00000435815 TNP1P09430 55 aa0.52□□□□□ -2.33
SNRPEP4-201ENST00000435815 DNAH5Q8TE73 4624 aa0.52□□□□□ -2.33
SNRPEP4-201ENST00000435815 PKHD1P08F94 4074 aa0.51□□□□□ -2.33
SNRPEP4-201ENST00000435815 LINC01556Q5JQF7 62 aa0.51□□□□□ -2.33
SNRPEP4-201ENST00000435815 SPG11Q96JI7 2443 aa0.51□□□□□ -2.33
SNRPEP4-201ENST00000435815 FLGP20930 4061 aaPredicted RBP0.51□□□□□ -2.33
SNRPEP4-201ENST00000435815 PLECQ15149 4684 aaKnown RBP0.5□□□□□ -2.33
SNRPEP4-201ENST00000435815 ITPR1Q14643 2758 aa0.5□□□□□ -2.33
SNRPEP4-201ENST00000435815 SPART-AS1P0CW21 52 aa0.5□□□□□ -2.33
SNRPEP4-201ENST00000435815 SPRR2BP35325 72 aa0.5□□□□□ -2.33
SNRPEP4-201ENST00000435815 CACNA1AO00555 2505 aa0.5□□□□□ -2.33
SNRPEP4-201ENST00000435815 FAT3Q8TDW7 4589 aa0.5□□□□□ -2.33
SNRPEP4-201ENST00000435815 NCOR2Q9Y618 2525 aa0.49□□□□□ -2.33
SNRPEP4-201ENST00000435815 ADGRG4Q8IZF6 3080 aa0.49□□□□□ -2.33
SNRPEP4-201ENST00000435815 FLNBO75369 2602 aaKnown RBP0.49□□□□□ -2.33
SNRPEP4-201ENST00000435815 NBEAL2Q6ZNJ1 2754 aa0.49□□□□□ -2.33
SNRPEP4-201ENST00000435815 DEFB124Q8NES8 71 aa0.48□□□□□ -2.33
SNRPEP4-201ENST00000435815 LRBAP50851 2863 aa0.48□□□□□ -2.33
SNRPEP4-201ENST00000435815 USP24Q9UPU5 2620 aa0.48□□□□□ -2.33
SNRPEP4-201ENST00000435815 RIF1Q5UIP0 2472 aaKnown RBP0.47□□□□□ -2.33
SNRPEP4-201ENST00000435815 MAP1AP78559 2803 aaPredicted RBP0.47□□□□□ -2.33
SNRPEP4-201ENST00000435815 SONP18583 2426 aaKnown RBP0.47□□□□□ -2.33
SNRPEP4-201ENST00000435815 MTORP42345 2549 aa0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 DOPEY1Q5JWR5 2465 aa0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 KRTAP6-2Q3LI66 62 aa0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 LRP1BQ9NZR2 4599 aa0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 HMCN2Q8NDA2 5059 aa0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 ANKHD1Q8IWZ3 2542 aaKnown RBP0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 FAT1Q14517 4588 aa0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 EPG5Q9HCE0 2579 aa0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 TEX15Q9BXT5 2789 aa0.45□□□□□ -2.34
SNRPEP4-201ENST00000435815 SPTAN1Q13813 2472 aaKnown RBP0.45□□□□□ -2.34
SNRPEP4-201ENST00000435815 DYNC1H1Q14204 4646 aaKnown RBP0.45□□□□□ -2.34
SNRPEP4-201ENST00000435815 USP9XQ93008 2570 aaPredicted RBP0.45□□□□□ -2.34
SNRPEP4-201ENST00000435815 LRRK2Q5S007 2527 aa0.44□□□□□ -2.34
SNRPEP4-201ENST00000435815 STARD9Q9P2P6 4700 aa0.44□□□□□ -2.34
SNRPEP4-201ENST00000435815 HIVEP1P15822 2718 aa0.44□□□□□ -2.34
SNRPEP4-201ENST00000435815 USP9YO00507 2555 aaPredicted RBP0.43□□□□□ -2.34
SNRPEP4-201ENST00000435815 KRTAP8-1Q8IUC2 63 aa0.43□□□□□ -2.34
SNRPEP4-201ENST00000435815 TLN1Q9Y490 2541 aaKnown RBP0.43□□□□□ -2.34
SNRPEP4-201ENST00000435815 ANKRD11Q6UB99 2663 aaPredicted RBP0.43□□□□□ -2.34
SNRPEP4-201ENST00000435815 ZANQ9Y493 2812 aa0.43□□□□□ -2.34
SNRPEP4-201ENST00000435815 ACACBO00763 2458 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms