RNA–Protein interactions for RNA: ENST00000435815.1

SNRPEP4-201, Transcript of small nuclear ribonucleoprotein polypeptide E pseudogene 4, humanhuman

BASIC

Gene SNRPEP4, Length 279 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP4-201ENST00000435815 DNAH7Q8WXX0 4024 aa0.58□□□□□ -2.32
SNRPEP4-201ENST00000435815 SETD2Q9BYW2 2564 aaPredicted RBP0.58□□□□□ -2.32
SNRPEP4-201ENST00000435815 GPR98Q8WXG9 6306 aa0.58□□□□□ -2.32
SNRPEP4-201ENST00000435815 PTPN13Q12923 2485 aa0.58□□□□□ -2.32
SNRPEP4-201ENST00000435815 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
SNRPEP4-201ENST00000435815 HTTP42858 3142 aa0.58□□□□□ -2.32
SNRPEP4-201ENST00000435815 SETXQ7Z333 2677 aaKnown RBP0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 CELSR3Q9NYQ7 3312 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 DNAH6Q9C0G6 4158 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 TACC2O95359 2948 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 DNAH2Q9P225 4427 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 ACACAQ13085 2346 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 H3BUX3 64 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 M0QZ58 72 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 STAB1Q9NY15 2570 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 DMXL1Q9Y485 3027 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 LAMA1P25391 3075 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 GCN1Q92616 2671 aaKnown RBP0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 COL7A1Q02388 2944 aa0.57□□□□□ -2.32
SNRPEP4-201ENST00000435815 APC2O95996 2303 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 DNAH8Q96JB1 4490 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 TRIOO75962 3097 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 SVEP1Q4LDE5 3571 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 COL6A5A8TX70 2615 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 TENM2Q9NT68 2774 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 C9orf92A6NGG3 77 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 DEFB4AO15263 64 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 HTN3P15516 51 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 SPRR2DP22532 72 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 COL12A1Q99715 3063 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 DNAH10Q8IVF4 4471 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 LPAP08519 4548 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 FRYQ5TBA9 3013 aa0.56□□□□□ -2.32
SNRPEP4-201ENST00000435815 DYNC2H1Q8NCM8 4307 aaKnown RBP0.55□□□□□ -2.32
SNRPEP4-201ENST00000435815 NBEAQ8NFP9 2946 aa0.55□□□□□ -2.32
SNRPEP4-201ENST00000435815 DMXL2Q8TDJ6 3036 aa0.55□□□□□ -2.32
SNRPEP4-201ENST00000435815 FLNCQ14315 2725 aa0.55□□□□□ -2.32
SNRPEP4-201ENST00000435815 AHNAKQ09666 5890 aaKnown RBP0.55□□□□□ -2.32
SNRPEP4-201ENST00000435815 DMBT1Q9UGM3 2413 aaPredicted RBP0.55□□□□□ -2.32
SNRPEP4-201ENST00000435815 CSMD2Q7Z408 3487 aa0.55□□□□□ -2.32
SNRPEP4-201ENST00000435815 SPTBN4Q9H254 2564 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 MUC3AQ02505 3323 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 KALRNO60229 2985 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 MUC5BQ9HC84 5762 aaPredicted RBP0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 HRNRQ86YZ3 2850 aaPredicted RBP0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 DCHS2Q6V1P9 2916 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 H3BNG1 76 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 CRYBG3Q68DQ2 2970 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 ATMQ13315 3056 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 DNAH17Q9UFH2 4485 aa0.54□□□□□ -2.32
SNRPEP4-201ENST00000435815 NSD1Q96L73 2696 aaPredicted RBP0.53□□□□□ -2.32
SNRPEP4-201ENST00000435815 DNAH9Q9NYC9 4486 aa0.53□□□□□ -2.32
SNRPEP4-201ENST00000435815 APOBP04114 4563 aaKnown RBP0.53□□□□□ -2.32
SNRPEP4-201ENST00000435815 FAM186AA6NE01 2351 aa0.53□□□□□ -2.33
SNRPEP4-201ENST00000435815 EYSQ5T1H1 3165 aa0.53□□□□□ -2.33
SNRPEP4-201ENST00000435815 TENM3Q9P273 2699 aa0.52□□□□□ -2.33
SNRPEP4-201ENST00000435815 CCDC168Q8NDH2 2452 aa0.52□□□□□ -2.33
SNRPEP4-201ENST00000435815 TNP1P09430 55 aa0.52□□□□□ -2.33
SNRPEP4-201ENST00000435815 DNAH5Q8TE73 4624 aa0.52□□□□□ -2.33
SNRPEP4-201ENST00000435815 PKHD1P08F94 4074 aa0.51□□□□□ -2.33
SNRPEP4-201ENST00000435815 LINC01556Q5JQF7 62 aa0.51□□□□□ -2.33
SNRPEP4-201ENST00000435815 SPG11Q96JI7 2443 aa0.51□□□□□ -2.33
SNRPEP4-201ENST00000435815 FLGP20930 4061 aaPredicted RBP0.51□□□□□ -2.33
SNRPEP4-201ENST00000435815 PLECQ15149 4684 aaKnown RBP0.5□□□□□ -2.33
SNRPEP4-201ENST00000435815 ITPR1Q14643 2758 aa0.5□□□□□ -2.33
SNRPEP4-201ENST00000435815 SPART-AS1P0CW21 52 aa0.5□□□□□ -2.33
SNRPEP4-201ENST00000435815 SPRR2BP35325 72 aa0.5□□□□□ -2.33
SNRPEP4-201ENST00000435815 CACNA1AO00555 2505 aa0.5□□□□□ -2.33
SNRPEP4-201ENST00000435815 FAT3Q8TDW7 4589 aa0.5□□□□□ -2.33
SNRPEP4-201ENST00000435815 NCOR2Q9Y618 2525 aa0.49□□□□□ -2.33
SNRPEP4-201ENST00000435815 ADGRG4Q8IZF6 3080 aa0.49□□□□□ -2.33
SNRPEP4-201ENST00000435815 FLNBO75369 2602 aaKnown RBP0.49□□□□□ -2.33
SNRPEP4-201ENST00000435815 NBEAL2Q6ZNJ1 2754 aa0.49□□□□□ -2.33
SNRPEP4-201ENST00000435815 DEFB124Q8NES8 71 aa0.48□□□□□ -2.33
SNRPEP4-201ENST00000435815 LRBAP50851 2863 aa0.48□□□□□ -2.33
SNRPEP4-201ENST00000435815 USP24Q9UPU5 2620 aa0.48□□□□□ -2.33
SNRPEP4-201ENST00000435815 RIF1Q5UIP0 2472 aaKnown RBP0.47□□□□□ -2.33
SNRPEP4-201ENST00000435815 MAP1AP78559 2803 aaPredicted RBP0.47□□□□□ -2.33
SNRPEP4-201ENST00000435815 SONP18583 2426 aaKnown RBP0.47□□□□□ -2.33
SNRPEP4-201ENST00000435815 MTORP42345 2549 aa0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 DOPEY1Q5JWR5 2465 aa0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 KRTAP6-2Q3LI66 62 aa0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 LRP1BQ9NZR2 4599 aa0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 HMCN2Q8NDA2 5059 aa0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 ANKHD1Q8IWZ3 2542 aaKnown RBP0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 FAT1Q14517 4588 aa0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 EPG5Q9HCE0 2579 aa0.46□□□□□ -2.34
SNRPEP4-201ENST00000435815 TEX15Q9BXT5 2789 aa0.45□□□□□ -2.34
SNRPEP4-201ENST00000435815 SPTAN1Q13813 2472 aaKnown RBP0.45□□□□□ -2.34
SNRPEP4-201ENST00000435815 DYNC1H1Q14204 4646 aaKnown RBP0.45□□□□□ -2.34
SNRPEP4-201ENST00000435815 USP9XQ93008 2570 aaPredicted RBP0.45□□□□□ -2.34
SNRPEP4-201ENST00000435815 LRRK2Q5S007 2527 aa0.44□□□□□ -2.34
SNRPEP4-201ENST00000435815 STARD9Q9P2P6 4700 aa0.44□□□□□ -2.34
SNRPEP4-201ENST00000435815 HIVEP1P15822 2718 aa0.44□□□□□ -2.34
SNRPEP4-201ENST00000435815 USP9YO00507 2555 aaPredicted RBP0.43□□□□□ -2.34
SNRPEP4-201ENST00000435815 KRTAP8-1Q8IUC2 63 aa0.43□□□□□ -2.34
SNRPEP4-201ENST00000435815 TLN1Q9Y490 2541 aaKnown RBP0.43□□□□□ -2.34
SNRPEP4-201ENST00000435815 ANKRD11Q6UB99 2663 aaPredicted RBP0.43□□□□□ -2.34
SNRPEP4-201ENST00000435815 ZANQ9Y493 2812 aa0.43□□□□□ -2.34
SNRPEP4-201ENST00000435815 ACACBO00763 2458 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms