RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 ALMS1Q8TCU4 4167 aa4.69□□□□□ -1.66
SEC16A-206ENST00000431893 KRTAP10-4P60372 401 aaPredicted RBP4.68□□□□□ -1.66
SEC16A-206ENST00000431893 COL7A1Q02388 2944 aa4.67□□□□□ -1.66
SEC16A-206ENST00000431893 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.66
SEC16A-206ENST00000431893 AKAP9Q99996 3911 aa4.63□□□□□ -1.67
SEC16A-206ENST00000431893 KRTAP4-1Q9BYQ7 146 aa4.5□□□□□ -1.69
SEC16A-206ENST00000431893 DNAH9Q9NYC9 4486 aa4.46□□□□□ -1.7
SEC16A-206ENST00000431893 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
SEC16A-206ENST00000431893 ZNF469Q96JG9 3925 aaPredicted RBP4.44□□□□□ -1.7
SEC16A-206ENST00000431893 DNAH1Q9P2D7 4330 aa4.43□□□□□ -1.7
SEC16A-206ENST00000431893 MT1HP80294 61 aa4.43□□□□□ -1.7
SEC16A-206ENST00000431893 DNAH2Q9P225 4427 aa4.42□□□□□ -1.7
SEC16A-206ENST00000431893 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
SEC16A-206ENST00000431893 DNAH10Q8IVF4 4471 aa4.38□□□□□ -1.71
SEC16A-206ENST00000431893 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
SEC16A-206ENST00000431893 DNAH8Q96JB1 4490 aa4.35□□□□□ -1.71
SEC16A-206ENST00000431893 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
SEC16A-206ENST00000431893 MT2AP02795 61 aa4.35□□□□□ -1.71
SEC16A-206ENST00000431893 DNHD1Q96M86 4753 aa4.31□□□□□ -1.72
SEC16A-206ENST00000431893 MT1FP04733 61 aa4.29□□□□□ -1.72
SEC16A-206ENST00000431893 DNAH5Q8TE73 4624 aa4.28□□□□□ -1.72
SEC16A-206ENST00000431893 DNAH3Q8TD57 4116 aa4.28□□□□□ -1.72
SEC16A-206ENST00000431893 ANK2Q01484 3957 aa4.27□□□□□ -1.73
SEC16A-206ENST00000431893 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
SEC16A-206ENST00000431893 SPRR2GQ9BYE4 73 aa4.25□□□□□ -1.73
SEC16A-206ENST00000431893 FRAS1Q86XX4 4008 aa4.24□□□□□ -1.73
SEC16A-206ENST00000431893 DNAH11Q96DT5 4516 aa4.23□□□□□ -1.73
SEC16A-206ENST00000431893 PLECQ15149 4684 aaKnown RBP4.21□□□□□ -1.73
SEC16A-206ENST00000431893 DNAH17Q9UFH2 4485 aa4.16□□□□□ -1.74
SEC16A-206ENST00000431893 FAT2Q9NYQ8 4349 aa4.14□□□□□ -1.75
SEC16A-206ENST00000431893 PRKDCP78527 4128 aaKnown RBP4.13□□□□□ -1.75
SEC16A-206ENST00000431893 MT1GP13640 62 aa4.13□□□□□ -1.75
SEC16A-206ENST00000431893 SPRR2EP22531 72 aa4.13□□□□□ -1.75
SEC16A-206ENST00000431893 SPRR2BP35325 72 aa4.13□□□□□ -1.75
SEC16A-206ENST00000431893 SPRR2AP35326 72 aa4.13□□□□□ -1.75
SEC16A-206ENST00000431893 VPS13DQ5THJ4 4388 aa4.11□□□□□ -1.75
SEC16A-206ENST00000431893 FAT1Q14517 4588 aa4.1□□□□□ -1.75
SEC16A-206ENST00000431893 STARD9Q9P2P6 4700 aa4.1□□□□□ -1.75
SEC16A-206ENST00000431893 VPS13BQ7Z7G8 4022 aa4.09□□□□□ -1.75
SEC16A-206ENST00000431893 KRTAP12-4P60329 112 aa4.09□□□□□ -1.76
SEC16A-206ENST00000431893 KMT2AQ03164 3969 aa4.08□□□□□ -1.76
SEC16A-206ENST00000431893 DYNC1H1Q14204 4646 aaKnown RBP4.07□□□□□ -1.76
SEC16A-206ENST00000431893 CMYA5Q8N3K9 4069 aa4.07□□□□□ -1.76
SEC16A-206ENST00000431893 LRP1BQ9NZR2 4599 aa4.07□□□□□ -1.76
SEC16A-206ENST00000431893 DYNC2H1Q8NCM8 4307 aaKnown RBP4.05□□□□□ -1.76
SEC16A-206ENST00000431893 KRTAP17-1Q9BYP8 105 aa4.04□□□□□ -1.76
SEC16A-206ENST00000431893 DNAH7Q8WXX0 4024 aa4.03□□□□□ -1.76
SEC16A-206ENST00000431893 SACSQ9NZJ4 4579 aa4.02□□□□□ -1.77
SEC16A-206ENST00000431893 DNAH6Q9C0G6 4158 aa4.02□□□□□ -1.77
SEC16A-206ENST00000431893 SPRR2DP22532 72 aa3.97□□□□□ -1.77
SEC16A-206ENST00000431893 KRTAP4-8A0A0G2JLE6 195 aa3.96□□□□□ -1.77
SEC16A-206ENST00000431893 KRTAP4-8Q9BYQ9 185 aa3.96□□□□□ -1.77
SEC16A-206ENST00000431893 RYR1P21817 5038 aa3.96□□□□□ -1.78
SEC16A-206ENST00000431893 APOBP04114 4563 aaKnown RBP3.96□□□□□ -1.78
SEC16A-206ENST00000431893 MT1XP80297 61 aa3.94□□□□□ -1.78
SEC16A-206ENST00000431893 LYSTQ99698 3801 aa3.92□□□□□ -1.78
SEC16A-206ENST00000431893 KRTAP19-1Q8IUB9 90 aa3.91□□□□□ -1.78
SEC16A-206ENST00000431893 LCE2BO14633 110 aa3.9□□□□□ -1.78
SEC16A-206ENST00000431893 RYR3Q15413 4870 aa3.89□□□□□ -1.79
SEC16A-206ENST00000431893 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
SEC16A-206ENST00000431893 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
SEC16A-206ENST00000431893 BIRC6Q9NR09 4857 aa3.85□□□□□ -1.79
SEC16A-206ENST00000431893 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
SEC16A-206ENST00000431893 KRTAP19-8Q3LI54 63 aa3.84□□□□□ -1.8
SEC16A-206ENST00000431893 MT1BP07438 61 aa3.81□□□□□ -1.8
SEC16A-206ENST00000431893 HECTD4Q9Y4D8 3996 aa3.8□□□□□ -1.8
SEC16A-206ENST00000431893 RYR2Q92736 4967 aa3.8□□□□□ -1.8
SEC16A-206ENST00000431893 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
SEC16A-206ENST00000431893 FAT3Q8TDW7 4589 aa3.77□□□□□ -1.81
SEC16A-206ENST00000431893 HSPG2P98160 4391 aa3.75□□□□□ -1.81
SEC16A-206ENST00000431893 KRTAP19-4Q3LI73 84 aa3.75□□□□□ -1.81
SEC16A-206ENST00000431893 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
SEC16A-206ENST00000431893 LPAP08519 4548 aa3.72□□□□□ -1.81
SEC16A-206ENST00000431893 PRM1P04553 51 aa3.7□□□□□ -1.82
SEC16A-206ENST00000431893 KIAA1109Q2LD37 5005 aa3.7□□□□□ -1.82
SEC16A-206ENST00000431893 MYCBP2O75592 4640 aa3.7□□□□□ -1.82
SEC16A-206ENST00000431893 PKHD1L1Q86WI1 4243 aa3.69□□□□□ -1.82
SEC16A-206ENST00000431893 HYDINQ4G0P3 5121 aa3.68□□□□□ -1.82
SEC16A-206ENST00000431893 LRP1Q07954 4544 aaKnown RBP3.68□□□□□ -1.82
SEC16A-206ENST00000431893 LOC100996750A0A140TA64 210 aa3.67□□□□□ -1.82
SEC16A-206ENST00000431893 PKD1P98161 4303 aa3.67□□□□□ -1.82
SEC16A-206ENST00000431893 LCE2CQ5TA81 110 aa3.66□□□□□ -1.82
SEC16A-206ENST00000431893 HERC2O95714 4834 aa3.66□□□□□ -1.82
SEC16A-206ENST00000431893 MT4P47944 62 aa3.64□□□□□ -1.83
SEC16A-206ENST00000431893 KRTAP9-2Q9BYQ4 174 aa3.64□□□□□ -1.83
SEC16A-206ENST00000431893 KRTAP9-3Q9BYQ3 159 aa3.63□□□□□ -1.83
SEC16A-206ENST00000431893 LCE2DQ5TA82 110 aaPredicted RBP3.63□□□□□ -1.83
SEC16A-206ENST00000431893 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
SEC16A-206ENST00000431893 MT1LQ93083 61 aa3.6□□□□□ -1.83
SEC16A-206ENST00000431893 KRTAP9-6A0A140TA67 174 aa3.58□□□□□ -1.84
SEC16A-206ENST00000431893 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
SEC16A-206ENST00000431893 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
SEC16A-206ENST00000431893 HERC1Q15751 4861 aa3.55□□□□□ -1.84
SEC16A-206ENST00000431893 PKHD1P08F94 4074 aa3.55□□□□□ -1.84
SEC16A-206ENST00000431893 MT1EP04732 61 aa3.53□□□□□ -1.84
SEC16A-206ENST00000431893 LCE1DQ5T752 114 aa3.52□□□□□ -1.85
SEC16A-206ENST00000431893 PCLOQ9Y6V0 5065 aa3.5□□□□□ -1.85
SEC16A-206ENST00000431893 KMT2CQ8NEZ4 4911 aaKnown RBP3.49□□□□□ -1.85
SEC16A-206ENST00000431893 KRTAP4-9Q9BYQ8 210 aa3.49□□□□□ -1.85
SEC16A-206ENST00000431893 MT1MQ8N339 61 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms