RNA–Protein interactions for RNA: ENST00000431480.6

TBC1D4-204, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,347 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-204ENST00000431480 CUBNO60494 3623 aa7.43□□□□□ -1.22
TBC1D4-204ENST00000431480 VPS13CQ709C8 3753 aa7.42□□□□□ -1.22
TBC1D4-204ENST00000431480 ALMS1Q8TCU4 4167 aa7.34□□□□□ -1.23
TBC1D4-204ENST00000431480 AKAP9Q99996 3911 aa7.32□□□□□ -1.24
TBC1D4-204ENST00000431480 KRTAP4-1Q9BYQ7 146 aa7.09□□□□□ -1.27
TBC1D4-204ENST00000431480 MT1HP80294 61 aa7.09□□□□□ -1.27
TBC1D4-204ENST00000431480 DNAH9Q9NYC9 4486 aa7.05□□□□□ -1.28
TBC1D4-204ENST00000431480 CSMD3Q7Z407 3707 aa7.03□□□□□ -1.28
TBC1D4-204ENST00000431480 MT2AP02795 61 aa7□□□□□ -1.29
TBC1D4-204ENST00000431480 KRTAP10-7P60409 375 aaPredicted RBP6.97□□□□□ -1.29
TBC1D4-204ENST00000431480 ZNF469Q96JG9 3925 aaPredicted RBP6.97□□□□□ -1.29
TBC1D4-204ENST00000431480 DNAH1Q9P2D7 4330 aa6.96□□□□□ -1.29
TBC1D4-204ENST00000431480 SPRR2FQ96RM1 72 aa6.96□□□□□ -1.3
TBC1D4-204ENST00000431480 SPRR2GQ9BYE4 73 aa6.95□□□□□ -1.3
TBC1D4-204ENST00000431480 DNAH5Q8TE73 4624 aa6.95□□□□□ -1.3
TBC1D4-204ENST00000431480 KRTAP19-5Q3LI72 72 aa6.95□□□□□ -1.3
TBC1D4-204ENST00000431480 DNAH10Q8IVF4 4471 aa6.89□□□□□ -1.31
TBC1D4-204ENST00000431480 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
TBC1D4-204ENST00000431480 MT1FP04733 61 aa6.85□□□□□ -1.31
TBC1D4-204ENST00000431480 DNAH2Q9P225 4427 aa6.81□□□□□ -1.32
TBC1D4-204ENST00000431480 PLECQ15149 4684 aaKnown RBP6.81□□□□□ -1.32
TBC1D4-204ENST00000431480 DNAH3Q8TD57 4116 aa6.8□□□□□ -1.32
TBC1D4-204ENST00000431480 DNAH11Q96DT5 4516 aa6.75□□□□□ -1.33
TBC1D4-204ENST00000431480 FAT1Q14517 4588 aa6.75□□□□□ -1.33
TBC1D4-204ENST00000431480 DNAH17Q9UFH2 4485 aa6.7□□□□□ -1.34
TBC1D4-204ENST00000431480 VPS13DQ5THJ4 4388 aa6.67□□□□□ -1.34
TBC1D4-204ENST00000431480 KRTAP19-4Q3LI73 84 aa6.56□□□□□ -1.36
TBC1D4-204ENST00000431480 ANK2Q01484 3957 aa6.55□□□□□ -1.36
TBC1D4-204ENST00000431480 LCE3BQ5TA77 95 aa6.52□□□□□ -1.37
TBC1D4-204ENST00000431480 DNAH8Q96JB1 4490 aa6.52□□□□□ -1.37
TBC1D4-204ENST00000431480 FAT2Q9NYQ8 4349 aa6.52□□□□□ -1.37
TBC1D4-204ENST00000431480 SPRR2EP22531 72 aa6.52□□□□□ -1.37
TBC1D4-204ENST00000431480 SPRR2BP35325 72 aa6.52□□□□□ -1.37
TBC1D4-204ENST00000431480 SPRR2AP35326 72 aa6.52□□□□□ -1.37
TBC1D4-204ENST00000431480 STARD9Q9P2P6 4700 aa6.5□□□□□ -1.37
TBC1D4-204ENST00000431480 DYNC2H1Q8NCM8 4307 aaKnown RBP6.5□□□□□ -1.37
TBC1D4-204ENST00000431480 DYNC1H1Q14204 4646 aaKnown RBP6.45□□□□□ -1.38
TBC1D4-204ENST00000431480 LRP1BQ9NZR2 4599 aa6.45□□□□□ -1.38
TBC1D4-204ENST00000431480 CMYA5Q8N3K9 4069 aa6.45□□□□□ -1.38
TBC1D4-204ENST00000431480 FRAS1Q86XX4 4008 aa6.43□□□□□ -1.38
TBC1D4-204ENST00000431480 KMT2AQ03164 3969 aa6.42□□□□□ -1.38
TBC1D4-204ENST00000431480 SACSQ9NZJ4 4579 aa6.4□□□□□ -1.39
TBC1D4-204ENST00000431480 MT1GP13640 62 aa6.38□□□□□ -1.39
TBC1D4-204ENST00000431480 PRKDCP78527 4128 aaKnown RBP6.37□□□□□ -1.39
TBC1D4-204ENST00000431480 KRTAP19-8Q3LI54 63 aa6.37□□□□□ -1.39
TBC1D4-204ENST00000431480 RYR1P21817 5038 aa6.36□□□□□ -1.39
TBC1D4-204ENST00000431480 KRTAP12-4P60329 112 aa6.36□□□□□ -1.39
TBC1D4-204ENST00000431480 KRTAP19-1Q8IUB9 90 aa6.35□□□□□ -1.39
TBC1D4-204ENST00000431480 VPS13BQ7Z7G8 4022 aa6.34□□□□□ -1.39
TBC1D4-204ENST00000431480 DNAH7Q8WXX0 4024 aa6.34□□□□□ -1.4
TBC1D4-204ENST00000431480 DNAH6Q9C0G6 4158 aa6.31□□□□□ -1.4
TBC1D4-204ENST00000431480 SPRR2DP22532 72 aa6.3□□□□□ -1.4
TBC1D4-204ENST00000431480 MT1XP80297 61 aa6.29□□□□□ -1.4
TBC1D4-204ENST00000431480 APOBP04114 4563 aaKnown RBP6.28□□□□□ -1.4
TBC1D4-204ENST00000431480 LCE2BO14633 110 aa6.26□□□□□ -1.41
TBC1D4-204ENST00000431480 DNHD1Q96M86 4753 aa6.26□□□□□ -1.41
TBC1D4-204ENST00000431480 LRP1Q07954 4544 aaKnown RBP6.16□□□□□ -1.42
TBC1D4-204ENST00000431480 MT1BP07438 61 aa6.16□□□□□ -1.42
TBC1D4-204ENST00000431480 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.42
TBC1D4-204ENST00000431480 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.42
TBC1D4-204ENST00000431480 LYSTQ99698 3801 aa6.14□□□□□ -1.43
TBC1D4-204ENST00000431480 LCE3DQ9BYE3 92 aa6.13□□□□□ -1.43
TBC1D4-204ENST00000431480 HECTD4Q9Y4D8 3996 aa6.12□□□□□ -1.43
TBC1D4-204ENST00000431480 FAT3Q8TDW7 4589 aa6.09□□□□□ -1.44
TBC1D4-204ENST00000431480 KRTAP17-1Q9BYP8 105 aa6.04□□□□□ -1.44
TBC1D4-204ENST00000431480 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
TBC1D4-204ENST00000431480 LCE3EQ5T5B0 92 aa6.03□□□□□ -1.44
TBC1D4-204ENST00000431480 RYR3Q15413 4870 aa6.02□□□□□ -1.45
TBC1D4-204ENST00000431480 SPRR5A0A1B0GTR4 108 aa5.98□□□□□ -1.45
TBC1D4-204ENST00000431480 MYCBP2O75592 4640 aa5.94□□□□□ -1.46
TBC1D4-204ENST00000431480 KRTAP9-3Q9BYQ3 159 aa5.93□□□□□ -1.46
TBC1D4-204ENST00000431480 KRTAP19-3Q7Z4W3 81 aa5.86□□□□□ -1.47
TBC1D4-204ENST00000431480 LCE2CQ5TA81 110 aa5.84□□□□□ -1.47
TBC1D4-204ENST00000431480 KRTAP4-7Q9BYR0 210 aa5.84□□□□□ -1.47
TBC1D4-204ENST00000431480 LCE2DQ5TA82 110 aaPredicted RBP5.79□□□□□ -1.48
TBC1D4-204ENST00000431480 HERC1Q15751 4861 aa5.78□□□□□ -1.48
TBC1D4-204ENST00000431480 MT1LQ93083 61 aa5.78□□□□□ -1.48
TBC1D4-204ENST00000431480 HSPG2P98160 4391 aa5.76□□□□□ -1.49
TBC1D4-204ENST00000431480 PKD1P98161 4303 aa5.72□□□□□ -1.49
TBC1D4-204ENST00000431480 MT1EP04732 61 aa5.7□□□□□ -1.5
TBC1D4-204ENST00000431480 RYR2Q92736 4967 aa5.67□□□□□ -1.5
TBC1D4-204ENST00000431480 LPAP08519 4548 aa5.65□□□□□ -1.5
TBC1D4-204ENST00000431480 KIAA1109Q2LD37 5005 aa5.64□□□□□ -1.51
TBC1D4-204ENST00000431480 MT4P47944 62 aa5.63□□□□□ -1.51
TBC1D4-204ENST00000431480 PRM1P04553 51 aa5.62□□□□□ -1.51
TBC1D4-204ENST00000431480 MT3P25713 68 aa5.62□□□□□ -1.51
TBC1D4-204ENST00000431480 HYDINQ4G0P3 5121 aa5.62□□□□□ -1.51
TBC1D4-204ENST00000431480 PKHD1L1Q86WI1 4243 aa5.59□□□□□ -1.51
TBC1D4-204ENST00000431480 TNXBP22105 4242 aa5.58□□□□□ -1.52
TBC1D4-204ENST00000431480 MT1MQ8N339 61 aa5.56□□□□□ -1.52
TBC1D4-204ENST00000431480 PKHD1P08F94 4074 aa5.55□□□□□ -1.52
TBC1D4-204ENST00000431480 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
TBC1D4-204ENST00000431480 LCE1BQ5T7P3 118 aa5.52□□□□□ -1.53
TBC1D4-204ENST00000431480 LRP2P98164 4655 aa5.48□□□□□ -1.53
TBC1D4-204ENST00000431480 LCE1DQ5T752 114 aa5.47□□□□□ -1.53
TBC1D4-204ENST00000431480 PCLOQ9Y6V0 5065 aa5.45□□□□□ -1.54
TBC1D4-204ENST00000431480 KRTAP4-3Q9BYR4 195 aa5.44□□□□□ -1.54
TBC1D4-204ENST00000431480 HERC2O95714 4834 aa5.43□□□□□ -1.54
TBC1D4-204ENST00000431480 KRTAP19-2Q3LHN2 52 aa5.39□□□□□ -1.55
TBC1D4-204ENST00000431480 MUC17Q685J3 4493 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms