RNA–Protein interactions for RNA: ENST00000430297.6

RETREG2-203, Transcript of reticulophagy regulator family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG2, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-203ENST00000430297 KRTAP3-2Q9BYR7 98 aa9.1□□□□□ -0.95
RETREG2-203ENST00000430297 DNAH10Q8IVF4 4471 aa9.02□□□□□ -0.97
RETREG2-203ENST00000430297 ALMS1Q8TCU4 4167 aa8.99□□□□□ -0.97
RETREG2-203ENST00000430297 VPS13DQ5THJ4 4388 aa8.98□□□□□ -0.97
RETREG2-203ENST00000430297 STARD9Q9P2P6 4700 aa8.91□□□□□ -0.98
RETREG2-203ENST00000430297 DNAH17Q9UFH2 4485 aa8.89□□□□□ -0.99
RETREG2-203ENST00000430297 FAT1Q14517 4588 aa8.82□□□□□ -1
RETREG2-203ENST00000430297 DYNC1H1Q14204 4646 aaKnown RBP8.8□□□□□ -1
RETREG2-203ENST00000430297 PRKDCP78527 4128 aaKnown RBP8.78□□□□□ -1
RETREG2-203ENST00000430297 LRP1BQ9NZR2 4599 aa8.74□□□□□ -1.01
RETREG2-203ENST00000430297 DNAH2Q9P225 4427 aa8.72□□□□□ -1.01
RETREG2-203ENST00000430297 ANK2Q01484 3957 aa8.62□□□□□ -1.03
RETREG2-203ENST00000430297 DNAH8Q96JB1 4490 aa8.6□□□□□ -1.03
RETREG2-203ENST00000430297 RYR1P21817 5038 aa8.58□□□□□ -1.04
RETREG2-203ENST00000430297 LORP23490 312 aaPredicted RBP8.58□□□□□ -1.04
RETREG2-203ENST00000430297 KMT2AQ03164 3969 aa8.57□□□□□ -1.04
RETREG2-203ENST00000430297 DNAH3Q8TD57 4116 aa8.55□□□□□ -1.04
RETREG2-203ENST00000430297 KRTAP15-1Q3LI76 137 aa8.55□□□□□ -1.04
RETREG2-203ENST00000430297 DYNC2H1Q8NCM8 4307 aaKnown RBP8.53□□□□□ -1.04
RETREG2-203ENST00000430297 SACSQ9NZJ4 4579 aa8.47□□□□□ -1.05
RETREG2-203ENST00000430297 LYSTQ99698 3801 aa8.46□□□□□ -1.06
RETREG2-203ENST00000430297 KRTAP4-1Q9BYQ7 146 aa8.45□□□□□ -1.06
RETREG2-203ENST00000430297 FAT2Q9NYQ8 4349 aa8.44□□□□□ -1.06
RETREG2-203ENST00000430297 KIAA1109Q2LD37 5005 aa8.44□□□□□ -1.06
RETREG2-203ENST00000430297 VPS13BQ7Z7G8 4022 aa8.36□□□□□ -1.07
RETREG2-203ENST00000430297 MYCBP2O75592 4640 aa8.34□□□□□ -1.07
RETREG2-203ENST00000430297 KRTAP10-12P60413 245 aa8.33□□□□□ -1.08
RETREG2-203ENST00000430297 APOBP04114 4563 aaKnown RBP8.3□□□□□ -1.08
RETREG2-203ENST00000430297 CMYA5Q8N3K9 4069 aa8.29□□□□□ -1.08
RETREG2-203ENST00000430297 RYR3Q15413 4870 aa8.28□□□□□ -1.08
RETREG2-203ENST00000430297 KRTAP23-1A1A580 65 aa8.21□□□□□ -1.09
RETREG2-203ENST00000430297 KRTAP17-1Q9BYP8 105 aa8.17□□□□□ -1.1
RETREG2-203ENST00000430297 DNAH6Q9C0G6 4158 aa8.17□□□□□ -1.1
RETREG2-203ENST00000430297 LRP1Q07954 4544 aaKnown RBP8.17□□□□□ -1.1
RETREG2-203ENST00000430297 KRTAP12-3P60328 96 aa8.15□□□□□ -1.1
RETREG2-203ENST00000430297 LCE3AQ5TA76 89 aa8.15□□□□□ -1.1
RETREG2-203ENST00000430297 HECTD4Q9Y4D8 3996 aa8.13□□□□□ -1.11
RETREG2-203ENST00000430297 FRAS1Q86XX4 4008 aa8.12□□□□□ -1.11
RETREG2-203ENST00000430297 DNAH7Q8WXX0 4024 aa8.1□□□□□ -1.11
RETREG2-203ENST00000430297 MT1HP80294 61 aa8.07□□□□□ -1.12
RETREG2-203ENST00000430297 FAT3Q8TDW7 4589 aa8.06□□□□□ -1.12
RETREG2-203ENST00000430297 RYR2Q92736 4967 aa8.01□□□□□ -1.13
RETREG2-203ENST00000430297 HYDINQ4G0P3 5121 aa8□□□□□ -1.13
RETREG2-203ENST00000430297 MT2AP02795 61 aa7.98□□□□□ -1.13
RETREG2-203ENST00000430297 SPRR2GQ9BYE4 73 aa7.96□□□□□ -1.13
RETREG2-203ENST00000430297 INE1O15225 51 aa7.94□□□□□ -1.14
RETREG2-203ENST00000430297 PKHD1P08F94 4074 aa7.87□□□□□ -1.15
RETREG2-203ENST00000430297 MT1FP04733 61 aa7.86□□□□□ -1.15
RETREG2-203ENST00000430297 HERC2O95714 4834 aa7.86□□□□□ -1.15
RETREG2-203ENST00000430297 LRP2P98164 4655 aa7.81□□□□□ -1.16
RETREG2-203ENST00000430297 CRCT1Q9UGL9 99 aa7.76□□□□□ -1.17
RETREG2-203ENST00000430297 HSPG2P98160 4391 aa7.69□□□□□ -1.18
RETREG2-203ENST00000430297 KMT2CQ8NEZ4 4911 aaKnown RBP7.64□□□□□ -1.19
RETREG2-203ENST00000430297 PKD1P98161 4303 aa7.63□□□□□ -1.19
RETREG2-203ENST00000430297 KRTAP19-1Q8IUB9 90 aa7.62□□□□□ -1.19
RETREG2-203ENST00000430297 KRTAP8-1Q8IUC2 63 aa7.61□□□□□ -1.19
RETREG2-203ENST00000430297 BIRC6Q9NR09 4857 aa7.55□□□□□ -1.2
RETREG2-203ENST00000430297 KRTAP19-8Q3LI54 63 aa7.48□□□□□ -1.21
RETREG2-203ENST00000430297 PCLOQ9Y6V0 5065 aa7.43□□□□□ -1.22
RETREG2-203ENST00000430297 LCE2CQ5TA81 110 aa7.41□□□□□ -1.22
RETREG2-203ENST00000430297 KRTAP19-5Q3LI72 72 aa7.4□□□□□ -1.23
RETREG2-203ENST00000430297 LPAP08519 4548 aa7.4□□□□□ -1.23
RETREG2-203ENST00000430297 HERC1Q15751 4861 aa7.4□□□□□ -1.23
RETREG2-203ENST00000430297 KRTAP9-8Q9BYQ0 159 aa7.37□□□□□ -1.23
RETREG2-203ENST00000430297 KRTAP10-7P60409 375 aaPredicted RBP7.3□□□□□ -1.24
RETREG2-203ENST00000430297 MT1BP07438 61 aa7.28□□□□□ -1.24
RETREG2-203ENST00000430297 MT1XP80297 61 aa7.28□□□□□ -1.24
RETREG2-203ENST00000430297 EPPK1P58107 5090 aaKnown RBP7.27□□□□□ -1.25
RETREG2-203ENST00000430297 TNXBP22105 4242 aa7.25□□□□□ -1.25
RETREG2-203ENST00000430297 ABCA13Q86UQ4 5058 aa7.24□□□□□ -1.25
RETREG2-203ENST00000430297 LCE3CQ5T5A8 94 aa7.23□□□□□ -1.25
RETREG2-203ENST00000430297 KRTAP19-2Q3LHN2 52 aa7.23□□□□□ -1.25
RETREG2-203ENST00000430297 KRTAP10-5P60370 271 aa7.23□□□□□ -1.25
RETREG2-203ENST00000430297 PKHD1L1Q86WI1 4243 aa7.21□□□□□ -1.26
RETREG2-203ENST00000430297 KRTAP9-3Q9BYQ3 159 aa7.14□□□□□ -1.27
RETREG2-203ENST00000430297 MUC17Q685J3 4493 aa7.14□□□□□ -1.27
RETREG2-203ENST00000430297 SPRR2FQ96RM1 72 aa7.12□□□□□ -1.27
RETREG2-203ENST00000430297 KRTAP19-4Q3LI73 84 aa7.06□□□□□ -1.28
RETREG2-203ENST00000430297 FLGP20930 4061 aaPredicted RBP7.01□□□□□ -1.29
RETREG2-203ENST00000430297 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.3
RETREG2-203ENST00000430297 KRTAP4-8Q9BYQ9 185 aa6.96□□□□□ -1.3
RETREG2-203ENST00000430297 SPRR5A0A1B0GTR4 108 aa6.91□□□□□ -1.3
RETREG2-203ENST00000430297 LCE2BO14633 110 aa6.86□□□□□ -1.31
RETREG2-203ENST00000430297 RNF213Q63HN8 5207 aa6.82□□□□□ -1.32
RETREG2-203ENST00000430297 FAT4Q6V0I7 4981 aa6.81□□□□□ -1.32
RETREG2-203ENST00000430297 UBR4Q5T4S7 5183 aa6.77□□□□□ -1.33
RETREG2-203ENST00000430297 MT1GP13640 62 aa6.65□□□□□ -1.34
RETREG2-203ENST00000430297 MUC2Q02817 5179 aa6.64□□□□□ -1.35
RETREG2-203ENST00000430297 FSIP2Q5CZC0 6907 aa6.63□□□□□ -1.35
RETREG2-203ENST00000430297 HMCN2Q8NDA2 5059 aa6.63□□□□□ -1.35
RETREG2-203ENST00000430297 SPRR2EP22531 72 aa6.57□□□□□ -1.36
RETREG2-203ENST00000430297 SPRR2BP35325 72 aa6.57□□□□□ -1.36
RETREG2-203ENST00000430297 SPRR2AP35326 72 aa6.57□□□□□ -1.36
RETREG2-203ENST00000430297 KRTAP4-7Q9BYR0 210 aa6.53□□□□□ -1.36
RETREG2-203ENST00000430297 MT1LQ93083 61 aa6.51□□□□□ -1.37
RETREG2-203ENST00000430297 LCE3BQ5TA77 95 aa6.49□□□□□ -1.37
RETREG2-203ENST00000430297 MT1EP04732 61 aa6.49□□□□□ -1.37
RETREG2-203ENST00000430297 LCE2AQ5TA79 106 aaPredicted RBP6.48□□□□□ -1.37
RETREG2-203ENST00000430297 KRTAP19-3Q7Z4W3 81 aa6.45□□□□□ -1.38
RETREG2-203ENST00000430297 SYNE1Q8NF91 8797 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms