RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 DNAH3Q8TD57 4116 aa7.63□□□□□ -1.19
SHISA9-201ENST00000423335 MT1HL1P0DM35 61 aa7.63□□□□□ -1.19
SHISA9-201ENST00000423335 KRTAP10-4P60372 401 aaPredicted RBP7.61□□□□□ -1.19
SHISA9-201ENST00000423335 LRP1BQ9NZR2 4599 aa7.61□□□□□ -1.19
SHISA9-201ENST00000423335 FRAS1Q86XX4 4008 aa7.56□□□□□ -1.2
SHISA9-201ENST00000423335 RYR3Q15413 4870 aa7.54□□□□□ -1.2
SHISA9-201ENST00000423335 DNAH8Q96JB1 4490 aa7.54□□□□□ -1.2
SHISA9-201ENST00000423335 MYCBP2O75592 4640 aa7.54□□□□□ -1.2
SHISA9-201ENST00000423335 HYDINQ4G0P3 5121 aa7.52□□□□□ -1.21
SHISA9-201ENST00000423335 A0A0A0MQY5 61 aa7.5□□□□□ -1.21
SHISA9-201ENST00000423335 KRTAP12-2P59991 146 aa7.49□□□□□ -1.21
SHISA9-201ENST00000423335 KRTAP13-4Q3LI77 160 aa7.49□□□□□ -1.21
SHISA9-201ENST00000423335 PLAC4Q8WY50 150 aa7.48□□□□□ -1.21
SHISA9-201ENST00000423335 DNAH2Q9P225 4427 aa7.47□□□□□ -1.21
SHISA9-201ENST00000423335 DNAH17Q9UFH2 4485 aa7.45□□□□□ -1.22
SHISA9-201ENST00000423335 DNAH6Q9C0G6 4158 aa7.45□□□□□ -1.22
SHISA9-201ENST00000423335 FAT3Q8TDW7 4589 aa7.44□□□□□ -1.22
SHISA9-201ENST00000423335 KRTAP10-6P60371 365 aaPredicted RBP7.42□□□□□ -1.22
SHISA9-201ENST00000423335 KRTAP10-10P60014 251 aa7.4□□□□□ -1.22
SHISA9-201ENST00000423335 VPS13BQ7Z7G8 4022 aa7.4□□□□□ -1.23
SHISA9-201ENST00000423335 KMT2CQ8NEZ4 4911 aaKnown RBP7.39□□□□□ -1.23
SHISA9-201ENST00000423335 ALMS1Q8TCU4 4167 aa7.39□□□□□ -1.23
SHISA9-201ENST00000423335 SACSQ9NZJ4 4579 aa7.39□□□□□ -1.23
SHISA9-201ENST00000423335 LRP1Q07954 4544 aaKnown RBP7.36□□□□□ -1.23
SHISA9-201ENST00000423335 KRTAP12-1P59990 96 aa7.36□□□□□ -1.23
SHISA9-201ENST00000423335 HECTD4Q9Y4D8 3996 aa7.35□□□□□ -1.23
SHISA9-201ENST00000423335 APOBP04114 4563 aaKnown RBP7.33□□□□□ -1.24
SHISA9-201ENST00000423335 DYNC2H1Q8NCM8 4307 aaKnown RBP7.31□□□□□ -1.24
SHISA9-201ENST00000423335 TNP1P09430 55 aa7.3□□□□□ -1.24
SHISA9-201ENST00000423335 PKHD1P08F94 4074 aa7.27□□□□□ -1.25
SHISA9-201ENST00000423335 KRTAP3-3Q9BYR6 98 aa7.27□□□□□ -1.25
SHISA9-201ENST00000423335 KRTAP3-2Q9BYR7 98 aa7.23□□□□□ -1.25
SHISA9-201ENST00000423335 KRTAP17-1Q9BYP8 105 aa7.22□□□□□ -1.25
SHISA9-201ENST00000423335 FAT2Q9NYQ8 4349 aa7.21□□□□□ -1.26
SHISA9-201ENST00000423335 RYR2Q92736 4967 aa7.21□□□□□ -1.26
SHISA9-201ENST00000423335 HERC2O95714 4834 aa7.18□□□□□ -1.26
SHISA9-201ENST00000423335 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
SHISA9-201ENST00000423335 LRP2P98164 4655 aa7.05□□□□□ -1.28
SHISA9-201ENST00000423335 EPPK1P58107 5090 aaKnown RBP6.98□□□□□ -1.29
SHISA9-201ENST00000423335 KRTAP4-1Q9BYQ7 146 aa6.94□□□□□ -1.3
SHISA9-201ENST00000423335 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
SHISA9-201ENST00000423335 PCLOQ9Y6V0 5065 aa6.9□□□□□ -1.31
SHISA9-201ENST00000423335 PKD1P98161 4303 aa6.88□□□□□ -1.31
SHISA9-201ENST00000423335 LORP23490 312 aaPredicted RBP6.86□□□□□ -1.31
SHISA9-201ENST00000423335 HSPG2P98160 4391 aa6.85□□□□□ -1.31
SHISA9-201ENST00000423335 BIRC6Q9NR09 4857 aa6.84□□□□□ -1.32
SHISA9-201ENST00000423335 ABCA13Q86UQ4 5058 aa6.76□□□□□ -1.33
SHISA9-201ENST00000423335 PRO2289Q9P1D8 64 aa6.73□□□□□ -1.33
SHISA9-201ENST00000423335 LPAP08519 4548 aa6.7□□□□□ -1.34
SHISA9-201ENST00000423335 HERC1Q15751 4861 aa6.62□□□□□ -1.35
SHISA9-201ENST00000423335 RNF213Q63HN8 5207 aa6.56□□□□□ -1.36
SHISA9-201ENST00000423335 FSIP2Q5CZC0 6907 aa6.52□□□□□ -1.37
SHISA9-201ENST00000423335 PKHD1L1Q86WI1 4243 aa6.52□□□□□ -1.37
SHISA9-201ENST00000423335 MT1HP80294 61 aa6.51□□□□□ -1.37
SHISA9-201ENST00000423335 MUC2Q02817 5179 aa6.45□□□□□ -1.38
SHISA9-201ENST00000423335 UBR4Q5T4S7 5183 aa6.43□□□□□ -1.38
SHISA9-201ENST00000423335 TNXBP22105 4242 aa6.4□□□□□ -1.38
SHISA9-201ENST00000423335 MT2AP02795 61 aa6.37□□□□□ -1.39
SHISA9-201ENST00000423335 LCE3AQ5TA76 89 aa6.34□□□□□ -1.39
SHISA9-201ENST00000423335 MT1FP04733 61 aa6.33□□□□□ -1.4
SHISA9-201ENST00000423335 FAT4Q6V0I7 4981 aa6.3□□□□□ -1.4
SHISA9-201ENST00000423335 KRTAP10-12P60413 245 aa6.26□□□□□ -1.41
SHISA9-201ENST00000423335 KRTAP12-3P60328 96 aa6.21□□□□□ -1.42
SHISA9-201ENST00000423335 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
SHISA9-201ENST00000423335 LCE2CQ5TA81 110 aa6.12□□□□□ -1.43
SHISA9-201ENST00000423335 CRCT1Q9UGL9 99 aa6.09□□□□□ -1.43
SHISA9-201ENST00000423335 SPRR2GQ9BYE4 73 aa6.09□□□□□ -1.44
SHISA9-201ENST00000423335 HMCN2Q8NDA2 5059 aa6.07□□□□□ -1.44
SHISA9-201ENST00000423335 KRTAP19-1Q8IUB9 90 aa6.05□□□□□ -1.44
SHISA9-201ENST00000423335 MUC17Q685J3 4493 aa6.01□□□□□ -1.45
SHISA9-201ENST00000423335 KRTAP9-8Q9BYQ0 159 aa5.99□□□□□ -1.45
SHISA9-201ENST00000423335 KRTAP19-2Q3LHN2 52 aa5.97□□□□□ -1.45
SHISA9-201ENST00000423335 INE1O15225 51 aa5.96□□□□□ -1.45
SHISA9-201ENST00000423335 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
SHISA9-201ENST00000423335 FLGP20930 4061 aaPredicted RBP5.88□□□□□ -1.47
SHISA9-201ENST00000423335 MT1BP07438 61 aa5.8□□□□□ -1.48
SHISA9-201ENST00000423335 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
SHISA9-201ENST00000423335 KRTAP9-3Q9BYQ3 159 aa5.77□□□□□ -1.48
SHISA9-201ENST00000423335 KRTAP19-8Q3LI54 63 aa5.75□□□□□ -1.49
SHISA9-201ENST00000423335 SPRR2FQ96RM1 72 aa5.72□□□□□ -1.49
SHISA9-201ENST00000423335 LCE2BO14633 110 aa5.71□□□□□ -1.49
SHISA9-201ENST00000423335 OBSCNQ5VST9 7968 aa5.71□□□□□ -1.49
SHISA9-201ENST00000423335 MT1XP80297 61 aa5.71□□□□□ -1.5
SHISA9-201ENST00000423335 KRTAP4-8A0A0G2JLE6 195 aa5.7□□□□□ -1.5
SHISA9-201ENST00000423335 KRTAP4-8Q9BYQ9 185 aa5.7□□□□□ -1.5
SHISA9-201ENST00000423335 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
SHISA9-201ENST00000423335 USH2AO75445 5202 aa5.68□□□□□ -1.5
SHISA9-201ENST00000423335 SYNE1Q8NF91 8797 aaKnown RBP5.67□□□□□ -1.5
SHISA9-201ENST00000423335 KRTAP10-5P60370 271 aa5.65□□□□□ -1.5
SHISA9-201ENST00000423335 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
SHISA9-201ENST00000423335 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
SHISA9-201ENST00000423335 LCE2AQ5TA79 106 aaPredicted RBP5.54□□□□□ -1.52
SHISA9-201ENST00000423335 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
SHISA9-201ENST00000423335 KRTAP9-2Q9BYQ4 174 aa5.39□□□□□ -1.55
SHISA9-201ENST00000423335 KMT2DO14686 5537 aa5.33□□□□□ -1.56
SHISA9-201ENST00000423335 FCGBPQ9Y6R7 5405 aaPredicted RBP5.31□□□□□ -1.56
SHISA9-201ENST00000423335 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
SHISA9-201ENST00000423335 SPRR2EP22531 72 aa5.28□□□□□ -1.56
SHISA9-201ENST00000423335 SPRR2BP35325 72 aa5.28□□□□□ -1.56
SHISA9-201ENST00000423335 SPRR2AP35326 72 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms