RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 RHPN1-AS1Q9BWJ2 59 aa1.05□□□□□ -2.24
XIST-201ENST00000416330 HRNRQ86YZ3 2850 aaPredicted RBP1.05□□□□□ -2.24
XIST-201ENST00000416330 LAMA5O15230 3695 aa1.04□□□□□ -2.24
XIST-201ENST00000416330 GPR98Q8WXG9 6306 aa1.04□□□□□ -2.24
XIST-201ENST00000416330 ACACBO00763 2458 aa1.04□□□□□ -2.24
XIST-201ENST00000416330 DNAH1Q9P2D7 4330 aa1.03□□□□□ -2.24
XIST-201ENST00000416330 APELAP0DMC3 54 aa1.03□□□□□ -2.24
XIST-201ENST00000416330 DNAH10Q8IVF4 4471 aa1.03□□□□□ -2.24
XIST-201ENST00000416330 RELNP78509 3460 aa1.02□□□□□ -2.25
XIST-201ENST00000416330 DEFB1P60022 68 aa1.02□□□□□ -2.25
XIST-201ENST00000416330 KRTAP6-2Q3LI66 62 aa1.02□□□□□ -2.25
XIST-201ENST00000416330 TEP1Q99973 2627 aaKnown RBP1.02□□□□□ -2.25
XIST-201ENST00000416330 AKAP9Q99996 3911 aa1.01□□□□□ -2.25
XIST-201ENST00000416330 TRIOO75962 3097 aa1.01□□□□□ -2.25
XIST-201ENST00000416330 FASNP49327 2511 aaKnown RBP1□□□□□ -2.25
XIST-201ENST00000416330 SPG11Q96JI7 2443 aa1□□□□□ -2.25
XIST-201ENST00000416330 MT1AP04731 61 aa0.99□□□□□ -2.25
XIST-201ENST00000416330 LRP1BQ9NZR2 4599 aa0.98□□□□□ -2.25
XIST-201ENST00000416330 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
XIST-201ENST00000416330 HTTP42858 3142 aa0.98□□□□□ -2.25
XIST-201ENST00000416330 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
XIST-201ENST00000416330 ZANQ9Y493 2812 aa0.97□□□□□ -2.25
XIST-201ENST00000416330 SMR3BP02814 79 aaPredicted RBP0.97□□□□□ -2.25
XIST-201ENST00000416330 DEFB136Q30KP8 78 aa0.97□□□□□ -2.25
XIST-201ENST00000416330 PKHD1P08F94 4074 aa0.97□□□□□ -2.25
XIST-201ENST00000416330 WDR87Q6ZQQ6 2873 aa0.97□□□□□ -2.25
XIST-201ENST00000416330 FAT1Q14517 4588 aa0.96□□□□□ -2.26
XIST-201ENST00000416330 MYO18BQ8IUG5 2567 aa0.96□□□□□ -2.26
XIST-201ENST00000416330 DMXL2Q8TDJ6 3036 aa0.96□□□□□ -2.26
XIST-201ENST00000416330 SPRR2AP35326 72 aa0.95□□□□□ -2.26
XIST-201ENST00000416330 TENM3Q9P273 2699 aa0.95□□□□□ -2.26
XIST-201ENST00000416330 HTN1P15515 57 aa0.94□□□□□ -2.26
XIST-201ENST00000416330 CEP250Q9BV73 2442 aa0.94□□□□□ -2.26
XIST-201ENST00000416330 CSMD1Q96PZ7 3565 aa0.93□□□□□ -2.26
XIST-201ENST00000416330 PLECQ15149 4684 aaKnown RBP0.93□□□□□ -2.26
XIST-201ENST00000416330 KRTAP19-5Q3LI72 72 aa0.92□□□□□ -2.26
XIST-201ENST00000416330 USP9XQ93008 2570 aaPredicted RBP0.91□□□□□ -2.26
XIST-201ENST00000416330 ATMQ13315 3056 aa0.9□□□□□ -2.26
XIST-201ENST00000416330 TLN2Q9Y4G6 2542 aa0.9□□□□□ -2.26
XIST-201ENST00000416330 MAST4O15021 2626 aa0.9□□□□□ -2.27
XIST-201ENST00000416330 ITPR1Q14643 2758 aa0.89□□□□□ -2.27
XIST-201ENST00000416330 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
XIST-201ENST00000416330 COL6A3P12111 3177 aa0.89□□□□□ -2.27
XIST-201ENST00000416330 LAMA1P25391 3075 aa0.89□□□□□ -2.27
XIST-201ENST00000416330 ADGRG4Q8IZF6 3080 aa0.89□□□□□ -2.27
XIST-201ENST00000416330 SVEP1Q4LDE5 3571 aa0.88□□□□□ -2.27
XIST-201ENST00000416330 IGSF10Q6WRI0 2623 aa0.88□□□□□ -2.27
XIST-201ENST00000416330 DEFB124Q8NES8 71 aa0.88□□□□□ -2.27
XIST-201ENST00000416330 MXRA5Q9NR99 2828 aa0.88□□□□□ -2.27
XIST-201ENST00000416330 TGP01266 2768 aa0.86□□□□□ -2.27
XIST-201ENST00000416330 DNAH17Q9UFH2 4485 aa0.85□□□□□ -2.27
XIST-201ENST00000416330 LRBAP50851 2863 aa0.85□□□□□ -2.27
XIST-201ENST00000416330 CMYA5Q8N3K9 4069 aa0.85□□□□□ -2.27
XIST-201ENST00000416330 FRYLO94915 3013 aa0.85□□□□□ -2.27
XIST-201ENST00000416330 SPRR2FQ96RM1 72 aa0.84□□□□□ -2.27
XIST-201ENST00000416330 MAP1AP78559 2803 aaPredicted RBP0.83□□□□□ -2.28
XIST-201ENST00000416330 SMG1Q96Q15 3661 aaKnown RBP0.83□□□□□ -2.28
XIST-201ENST00000416330 SPRR2EP22531 72 aa0.83□□□□□ -2.28
XIST-201ENST00000416330 LAMA3Q16787 3333 aa0.83□□□□□ -2.28
XIST-201ENST00000416330 MUC5BQ9HC84 5762 aaPredicted RBP0.83□□□□□ -2.28
XIST-201ENST00000416330 C5orf42Q9H799 3197 aa0.82□□□□□ -2.28
XIST-201ENST00000416330 MGAM2Q2M2H8 2515 aa0.82□□□□□ -2.28
XIST-201ENST00000416330 DNAH12Q6ZR08 3092 aa0.82□□□□□ -2.28
XIST-201ENST00000416330 PRUNE2Q8WUY3 3088 aa0.82□□□□□ -2.28
XIST-201ENST00000416330 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
XIST-201ENST00000416330 DYNC1H1Q14204 4646 aaKnown RBP0.82□□□□□ -2.28
XIST-201ENST00000416330 HMCN2Q8NDA2 5059 aa0.81□□□□□ -2.28
XIST-201ENST00000416330 FAT4Q6V0I7 4981 aa0.8□□□□□ -2.28
XIST-201ENST00000416330 NIPBLQ6KC79 2804 aaeCLIP0.8□□□□□ -2.28
XIST-201ENST00000416330 FLNAP21333 2647 aaKnown RBP0.79□□□□□ -2.28
XIST-201ENST00000416330 TEX15Q9BXT5 2789 aa0.76□□□□□ -2.29
XIST-201ENST00000416330 DNAH5Q8TE73 4624 aa0.76□□□□□ -2.29
XIST-201ENST00000416330 DEFB133Q30KQ1 61 aa0.75□□□□□ -2.29
XIST-201ENST00000416330 TRRAPQ9Y4A5 3859 aa0.74□□□□□ -2.29
XIST-201ENST00000416330 STATHP02808 62 aa0.73□□□□□ -2.29
XIST-201ENST00000416330 MUC17Q685J3 4493 aa0.73□□□□□ -2.29
XIST-201ENST00000416330 MKI67P46013 3256 aaKnown RBP0.72□□□□□ -2.29
XIST-201ENST00000416330 SZT2Q5T011 3432 aa0.72□□□□□ -2.29
XIST-201ENST00000416330 HERC1Q15751 4861 aa0.72□□□□□ -2.29
XIST-201ENST00000416330 LRP2P98164 4655 aa0.71□□□□□ -2.3
XIST-201ENST00000416330 MACF1Q9UPN3 7388 aaKnown RBP0.71□□□□□ -2.3
XIST-201ENST00000416330 NBEAL1Q6ZS30 2694 aa0.7□□□□□ -2.3
XIST-201ENST00000416330 SPTAN1Q13813 2472 aaKnown RBP0.7□□□□□ -2.3
XIST-201ENST00000416330 DOPEY1Q5JWR5 2465 aa0.7□□□□□ -2.3
XIST-201ENST00000416330 ITPR2Q14571 2701 aa0.7□□□□□ -2.3
XIST-201ENST00000416330 DMDP11532 3685 aa0.69□□□□□ -2.3
XIST-201ENST00000416330 A0A096LPF7 62 aa0.67□□□□□ -2.3
XIST-201ENST00000416330 CFAP46Q8IYW2 2715 aa0.66□□□□□ -2.3
XIST-201ENST00000416330 MUC3AQ02505 3323 aa0.64□□□□□ -2.31
XIST-201ENST00000416330 MDN1Q9NU22 5596 aa0.64□□□□□ -2.31
XIST-201ENST00000416330 VPS13CQ709C8 3753 aa0.64□□□□□ -2.31
XIST-201ENST00000416330 CSMD2Q7Z408 3487 aa0.63□□□□□ -2.31
XIST-201ENST00000416330 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
XIST-201ENST00000416330 DEFB108BQ8NET1 73 aa0.61□□□□□ -2.31
XIST-201ENST00000416330 STAB2Q8WWQ8 2551 aa0.6□□□□□ -2.31
XIST-201ENST00000416330 RPS29P62273 56 aaKnown RBP0.6□□□□□ -2.31
XIST-201ENST00000416330 DCHS1Q96JQ0 3298 aa0.59□□□□□ -2.31
XIST-201ENST00000416330 FREM2Q5SZK8 3169 aa0.58□□□□□ -2.32
XIST-201ENST00000416330 BOD1L1Q8NFC6 3051 aa0.57□□□□□ -2.32
XIST-201ENST00000416330 LINC01556Q5JQF7 62 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms