RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 TRRAPQ9Y4A5 3859 aa3.22□□□□□ -1.89
CLIP4-205ENST00000415891 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
CLIP4-205ENST00000415891 RYR3Q15413 4870 aa3.19□□□□□ -1.9
CLIP4-205ENST00000415891 KMT2CQ8NEZ4 4911 aaKnown RBP3.19□□□□□ -1.9
CLIP4-205ENST00000415891 LINC01556Q5JQF7 62 aa3.18□□□□□ -1.9
CLIP4-205ENST00000415891 SPART-AS1P0CW21 52 aa3.17□□□□□ -1.9
CLIP4-205ENST00000415891 BIRC6Q9NR09 4857 aa3.17□□□□□ -1.9
CLIP4-205ENST00000415891 DEFB135Q30KP9 77 aa3.17□□□□□ -1.9
CLIP4-205ENST00000415891 TENM1Q9UKZ4 2725 aa3.17□□□□□ -1.9
CLIP4-205ENST00000415891 DNAH1Q9P2D7 4330 aa3.16□□□□□ -1.9
CLIP4-205ENST00000415891 CMYA5Q8N3K9 4069 aa3.16□□□□□ -1.9
CLIP4-205ENST00000415891 KRTAP13-1Q8IUC0 172 aa3.16□□□□□ -1.9
CLIP4-205ENST00000415891 H3BNG1 76 aa3.15□□□□□ -1.91
CLIP4-205ENST00000415891 SPINK6Q6UWN8 80 aa3.14□□□□□ -1.91
CLIP4-205ENST00000415891 FRAS1Q86XX4 4008 aa3.14□□□□□ -1.91
CLIP4-205ENST00000415891 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
CLIP4-205ENST00000415891 A0A0D9SG42 100 aa3.12□□□□□ -1.91
CLIP4-205ENST00000415891 A0A1B0GVY2 172 aa3.12□□□□□ -1.91
CLIP4-205ENST00000415891 COL7A1Q02388 2944 aa3.11□□□□□ -1.91
CLIP4-205ENST00000415891 KRTAP13-4Q3LI77 160 aa3.1□□□□□ -1.91
CLIP4-205ENST00000415891 EPPK1P58107 5090 aaKnown RBP3.08□□□□□ -1.92
CLIP4-205ENST00000415891 DMBT1Q9UGM3 2413 aaPredicted RBP3.08□□□□□ -1.92
CLIP4-205ENST00000415891 DYNC2H1Q8NCM8 4307 aaKnown RBP3.07□□□□□ -1.92
CLIP4-205ENST00000415891 RYR2Q92736 4967 aa3.07□□□□□ -1.92
CLIP4-205ENST00000415891 KRTAP10-11P60412 298 aa3.06□□□□□ -1.92
CLIP4-205ENST00000415891 LYSTQ99698 3801 aa3.06□□□□□ -1.92
CLIP4-205ENST00000415891 KRTAP12-1P59990 96 aa3.05□□□□□ -1.92
CLIP4-205ENST00000415891 KRTAP10-6P60371 365 aaPredicted RBP3.05□□□□□ -1.92
CLIP4-205ENST00000415891 SACSQ9NZJ4 4579 aa3.03□□□□□ -1.92
CLIP4-205ENST00000415891 DNAH10Q8IVF4 4471 aa3.03□□□□□ -1.92
CLIP4-205ENST00000415891 DNAH3Q8TD57 4116 aa3.02□□□□□ -1.93
CLIP4-205ENST00000415891 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
CLIP4-205ENST00000415891 TENM3Q9P273 2699 aa3.01□□□□□ -1.93
CLIP4-205ENST00000415891 Q5VSD8 79 aa3□□□□□ -1.93
CLIP4-205ENST00000415891 DNAH8Q96JB1 4490 aa3□□□□□ -1.93
CLIP4-205ENST00000415891 DNAH9Q9NYC9 4486 aa3□□□□□ -1.93
CLIP4-205ENST00000415891 HERC2O95714 4834 aa3□□□□□ -1.93
CLIP4-205ENST00000415891 HYDINQ4G0P3 5121 aa2.99□□□□□ -1.93
CLIP4-205ENST00000415891 PCLOQ9Y6V0 5065 aa2.98□□□□□ -1.93
CLIP4-205ENST00000415891 RYR1P21817 5038 aa2.97□□□□□ -1.93
CLIP4-205ENST00000415891 VPS13DQ5THJ4 4388 aa2.97□□□□□ -1.93
CLIP4-205ENST00000415891 DNAH17Q9UFH2 4485 aa2.96□□□□□ -1.94
CLIP4-205ENST00000415891 DNAH7Q8WXX0 4024 aa2.94□□□□□ -1.94
CLIP4-205ENST00000415891 KRTAP10-3P60369 221 aa2.93□□□□□ -1.94
CLIP4-205ENST00000415891 STAB2Q8WWQ8 2551 aa2.93□□□□□ -1.94
CLIP4-205ENST00000415891 KRTAP1-4P0C5Y4 121 aa2.93□□□□□ -1.94
CLIP4-205ENST00000415891 KRTAP1-5Q9BYS1 174 aa2.91□□□□□ -1.94
CLIP4-205ENST00000415891 KRTAP10-1P60331 282 aa2.9□□□□□ -1.94
CLIP4-205ENST00000415891 DNAH11Q96DT5 4516 aa2.88□□□□□ -1.95
CLIP4-205ENST00000415891 STARD9Q9P2P6 4700 aa2.88□□□□□ -1.95
CLIP4-205ENST00000415891 PLECQ15149 4684 aaKnown RBP2.88□□□□□ -1.95
CLIP4-205ENST00000415891 KMT2AQ03164 3969 aa2.88□□□□□ -1.95
CLIP4-205ENST00000415891 HUWE1Q7Z6Z7 4374 aaKnown RBP2.87□□□□□ -1.95
CLIP4-205ENST00000415891 KIAA1109Q2LD37 5005 aa2.85□□□□□ -1.95
CLIP4-205ENST00000415891 HECTD4Q9Y4D8 3996 aa2.85□□□□□ -1.95
CLIP4-205ENST00000415891 ABCA13Q86UQ4 5058 aa2.84□□□□□ -1.96
CLIP4-205ENST00000415891 M0QZ58 72 aa2.84□□□□□ -1.96
CLIP4-205ENST00000415891 DNAH6Q9C0G6 4158 aa2.83□□□□□ -1.96
CLIP4-205ENST00000415891 KRTAP10-10P60014 251 aa2.8□□□□□ -1.96
CLIP4-205ENST00000415891 DYNC1H1Q14204 4646 aaKnown RBP2.78□□□□□ -1.96
CLIP4-205ENST00000415891 MYCBP2O75592 4640 aa2.78□□□□□ -1.96
CLIP4-205ENST00000415891 DNAH2Q9P225 4427 aa2.76□□□□□ -1.97
CLIP4-205ENST00000415891 HERC1Q15751 4861 aa2.74□□□□□ -1.97
CLIP4-205ENST00000415891 PKHD1P08F94 4074 aa2.73□□□□□ -1.97
CLIP4-205ENST00000415891 UBR4Q5T4S7 5183 aa2.72□□□□□ -1.97
CLIP4-205ENST00000415891 HSPG2P98160 4391 aa2.71□□□□□ -1.98
CLIP4-205ENST00000415891 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
CLIP4-205ENST00000415891 FAT2Q9NYQ8 4349 aa2.7□□□□□ -1.98
CLIP4-205ENST00000415891 C9orf92A6NGG3 77 aa2.7□□□□□ -1.98
CLIP4-205ENST00000415891 LCE1AQ5T7P2 110 aa2.68□□□□□ -1.98
CLIP4-205ENST00000415891 APOBP04114 4563 aaKnown RBP2.67□□□□□ -1.98
CLIP4-205ENST00000415891 RPS29P62273 56 aaKnown RBP2.66□□□□□ -1.98
CLIP4-205ENST00000415891 KRTAP6-3Q3LI67 103 aa2.65□□□□□ -1.99
CLIP4-205ENST00000415891 PKD1P98161 4303 aa2.65□□□□□ -1.99
CLIP4-205ENST00000415891 LRP1BQ9NZR2 4599 aa2.62□□□□□ -1.99
CLIP4-205ENST00000415891 VPS13BQ7Z7G8 4022 aa2.62□□□□□ -1.99
CLIP4-205ENST00000415891 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
CLIP4-205ENST00000415891 HMCN2Q8NDA2 5059 aa2.59□□□□□ -1.99
CLIP4-205ENST00000415891 DNAH5Q8TE73 4624 aa2.57□□□□□ -2
CLIP4-205ENST00000415891 PKHD1L1Q86WI1 4243 aa2.57□□□□□ -2
CLIP4-205ENST00000415891 LRP1Q07954 4544 aaKnown RBP2.55□□□□□ -2
CLIP4-205ENST00000415891 FAT1Q14517 4588 aa2.53□□□□□ -2
CLIP4-205ENST00000415891 TNP1P09430 55 aa2.53□□□□□ -2
CLIP4-205ENST00000415891 KRTAP12-4P60329 112 aa2.53□□□□□ -2
CLIP4-205ENST00000415891 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
CLIP4-205ENST00000415891 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
CLIP4-205ENST00000415891 RNF213Q63HN8 5207 aa2.51□□□□□ -2.01
CLIP4-205ENST00000415891 MT3P25713 68 aa2.5□□□□□ -2.01
CLIP4-205ENST00000415891 TNXBP22105 4242 aa2.49□□□□□ -2.01
CLIP4-205ENST00000415891 LCE3CQ5T5A8 94 aa2.47□□□□□ -2.01
CLIP4-205ENST00000415891 FAT3Q8TDW7 4589 aa2.46□□□□□ -2.02
CLIP4-205ENST00000415891 LRP2P98164 4655 aa2.43□□□□□ -2.02
CLIP4-205ENST00000415891 FAT4Q6V0I7 4981 aa2.43□□□□□ -2.02
CLIP4-205ENST00000415891 KRTAP10-7P60409 375 aaPredicted RBP2.38□□□□□ -2.03
CLIP4-205ENST00000415891 FLGP20930 4061 aaPredicted RBP2.37□□□□□ -2.03
CLIP4-205ENST00000415891 SMR3BP02814 79 aaPredicted RBP2.37□□□□□ -2.03
CLIP4-205ENST00000415891 KRTAP10-12P60413 245 aa2.37□□□□□ -2.03
CLIP4-205ENST00000415891 MUC2Q02817 5179 aa2.35□□□□□ -2.03
CLIP4-205ENST00000415891 KRTAP2-3P0C7H8 128 aa2.35□□□□□ -2.03
CLIP4-205ENST00000415891 KRTAP2-4Q9BYR9 128 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms