RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 AEBP2Q6ZN18 517 aaPredicted RBP13.62□□□□□ -0.23
CLIP4-205ENST00000415891 SLC24A1O60721 1099 aa13.17□□□□□ -0.3
CLIP4-205ENST00000415891 CHIC1Q5VXU3 224 aa13.11□□□□□ -0.31
CLIP4-205ENST00000415891 MYT1Q01538 1121 aa12.61□□□□□ -0.39
CLIP4-205ENST00000415891 PELP1Q8IZL8 1130 aaKnown RBP12.49□□□□□ -0.41
CLIP4-205ENST00000415891 TTBK1Q5TCY1 1321 aaPredicted RBP12.47□□□□□ -0.41
CLIP4-205ENST00000415891 DAXXQ9UER7 740 aaPredicted RBP12.25□□□□□ -0.45
CLIP4-205ENST00000415891 PRKCSHP14314 528 aaPredicted RBP12.16□□□□□ -0.46
CLIP4-205ENST00000415891 APLP2Q06481 763 aa12.14□□□□□ -0.47
CLIP4-205ENST00000415891 ERICH6Q7L0X2 663 aa12.04□□□□□ -0.48
CLIP4-205ENST00000415891 NCBP3Q53F19 620 aaKnown RBP11.72□□□□□ -0.53
CLIP4-205ENST00000415891 SENP3Q9H4L4 574 aaPredicted RBP11.6□□□□□ -0.55
CLIP4-205ENST00000415891 EHMT2Q96KQ7 1210 aa11.57□□□□□ -0.56
CLIP4-205ENST00000415891 PLPPR3Q6T4P5 718 aa11.54□□□□□ -0.56
CLIP4-205ENST00000415891 RTN4Q9NQC3 1192 aaKnown RBP11.51□□□□□ -0.57
CLIP4-205ENST00000415891 PHF23Q9BUL5 403 aaPredicted RBP11.51□□□□□ -0.57
CLIP4-205ENST00000415891 ARXQ96QS3 562 aa11.38□□□□□ -0.59
CLIP4-205ENST00000415891 EIF5BO60841 1220 aaKnown RBP11.36□□□□□ -0.59
CLIP4-205ENST00000415891 AMER1Q5JTC6 1135 aaPredicted RBP11.19□□□□□ -0.62
CLIP4-205ENST00000415891 BCL11AQ9H165 835 aa11.19□□□□□ -0.62
CLIP4-205ENST00000415891 TIMELESSQ9UNS1 1208 aa11.18□□□□□ -0.62
CLIP4-205ENST00000415891 RANGAP1P46060 587 aaPredicted RBP11.17□□□□□ -0.62
CLIP4-205ENST00000415891 KLHL34Q8N239 644 aa11.04□□□□□ -0.64
CLIP4-205ENST00000415891 PLEKHG5O94827 1062 aa10.99□□□□□ -0.65
CLIP4-205ENST00000415891 HOMEZQ8IX15 550 aa10.97□□□□□ -0.65
CLIP4-205ENST00000415891 TULP1O00294 542 aaPredicted RBP10.96□□□□□ -0.66
CLIP4-205ENST00000415891 FAM9AQ8IZU1 332 aaPredicted RBP10.96□□□□□ -0.66
CLIP4-205ENST00000415891 KCNA4P22459 653 aa10.88□□□□□ -0.67
CLIP4-205ENST00000415891 TAOK2Q9UL54 1235 aa10.82□□□□□ -0.68
CLIP4-205ENST00000415891 PODXL2Q9NZ53 605 aa10.82□□□□□ -0.68
CLIP4-205ENST00000415891 FOXD1Q16676 465 aa10.78□□□□□ -0.68
CLIP4-205ENST00000415891 CSRNP3Q8WYN3 585 aa10.68□□□□□ -0.7
CLIP4-205ENST00000415891 UBE2Q2Q8WVN8 375 aa10.63□□□□□ -0.71
CLIP4-205ENST00000415891 TPRNQ4KMQ1 711 aa10.61□□□□□ -0.71
CLIP4-205ENST00000415891 NPM2Q86SE8 214 aaKnown RBP10.61□□□□□ -0.71
CLIP4-205ENST00000415891 BCANQ96GW7 911 aa10.6□□□□□ -0.71
CLIP4-205ENST00000415891 GTF3C3Q9Y5Q9 886 aa10.55□□□□□ -0.72
CLIP4-205ENST00000415891 PDIA4P13667 645 aaKnown RBP10.54□□□□□ -0.72
CLIP4-205ENST00000415891 C14orf37Q86TY3 774 aa10.47□□□□□ -0.73
CLIP4-205ENST00000415891 FBXO3Q9UK99 471 aa10.46□□□□□ -0.74
CLIP4-205ENST00000415891 HRCP23327 699 aa10.44□□□□□ -0.74
CLIP4-205ENST00000415891 CENPBP07199 599 aaPredicted RBP10.4□□□□□ -0.75
CLIP4-205ENST00000415891 LOC105371045A0A1W2PR82 267 aa10.38□□□□□ -0.75
CLIP4-205ENST00000415891 PKNOX2Q96KN3 472 aa10.38□□□□□ -0.75
CLIP4-205ENST00000415891 SCAF1Q9H7N4 1312 aaKnown RBP10.38□□□□□ -0.75
CLIP4-205ENST00000415891 PDE4CQ08493 712 aa10.38□□□□□ -0.75
CLIP4-205ENST00000415891 NEFLP07196 543 aa10.34□□□□□ -0.75
CLIP4-205ENST00000415891 TMEM132AQ24JP5 1023 aa10.31□□□□□ -0.76
CLIP4-205ENST00000415891 PLCB2Q00722 1185 aa10.3□□□□□ -0.76
CLIP4-205ENST00000415891 TRIM26Q12899 539 aaPredicted RBP10.29□□□□□ -0.76
CLIP4-205ENST00000415891 CHMP4AQ9BY43 222 aa10.29□□□□□ -0.76
CLIP4-205ENST00000415891 TAF7LQ5H9L4 462 aa10.25□□□□□ -0.77
CLIP4-205ENST00000415891 DCAF8L2P0C7V8 631 aa10.23□□□□□ -0.77
CLIP4-205ENST00000415891 HAP1P54257 671 aaPredicted RBP10.23□□□□□ -0.77
CLIP4-205ENST00000415891 ADRA2BP18089 450 aa10.22□□□□□ -0.77
CLIP4-205ENST00000415891 SAMD1Q6SPF0 538 aaPredicted RBP10.22□□□□□ -0.77
CLIP4-205ENST00000415891 PPP6R1Q9UPN7 881 aa10.22□□□□□ -0.77
CLIP4-205ENST00000415891 BRD2P25440 801 aaKnown RBP10.21□□□□□ -0.77
CLIP4-205ENST00000415891 ANO8Q9HCE9 1232 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-205ENST00000415891 CNKSR2Q8WXI2 1034 aa10.18□□□□□ -0.78
CLIP4-205ENST00000415891 DHX37Q8IY37 1157 aaKnown RBP10.16□□□□□ -0.78
CLIP4-205ENST00000415891 PIAS4Q8N2W9 510 aaPredicted RBP10.15□□□□□ -0.78
CLIP4-205ENST00000415891 BCL11BQ9C0K0 894 aaPredicted RBP10.14□□□□□ -0.79
CLIP4-205ENST00000415891 FGD1P98174 961 aa10.13□□□□□ -0.79
CLIP4-205ENST00000415891 ANP32EQ9BTT0 268 aa10.13□□□□□ -0.79
CLIP4-205ENST00000415891 CDK11AQ9UQ88 783 aaPredicted RBP10.13□□□□□ -0.79
CLIP4-205ENST00000415891 CDK11BP21127 795 aaKnown RBP10.1□□□□□ -0.79
CLIP4-205ENST00000415891 SUPT5HO00267 1087 aaKnown RBP10.08□□□□□ -0.8
CLIP4-205ENST00000415891 UBTFP17480 764 aaKnown RBP10.07□□□□□ -0.8
CLIP4-205ENST00000415891 MSH5O43196 834 aa10.02□□□□□ -0.81
CLIP4-205ENST00000415891 POTEDQ86YR6 584 aa10□□□□□ -0.81
CLIP4-205ENST00000415891 HSP90B1P14625 803 aaKnown RBP9.99□□□□□ -0.81
CLIP4-205ENST00000415891 SHROOM4Q9ULL8 1493 aa9.96□□□□□ -0.81
CLIP4-205ENST00000415891 RSPH4AQ5TD94 716 aa9.96□□□□□ -0.82
CLIP4-205ENST00000415891 VSIG10Q8N0Z9 540 aa9.95□□□□□ -0.82
CLIP4-205ENST00000415891 IGSF3O75054 1194 aa9.93□□□□□ -0.82
CLIP4-205ENST00000415891 AAMPQ13685 434 aa9.91□□□□□ -0.82
CLIP4-205ENST00000415891 SLC4A1APQ9BWU0 796 aaKnown RBP9.91□□□□□ -0.82
CLIP4-205ENST00000415891 HMGB1P09429 215 aaKnown RBP9.9□□□□□ -0.83
CLIP4-205ENST00000415891 ZNF326Q5BKZ1 582 aaKnown RBP9.89□□□□□ -0.83
CLIP4-205ENST00000415891 CCDC136Q96JN2 1154 aa9.89□□□□□ -0.83
CLIP4-205ENST00000415891 RSPH6AQ9H0K4 717 aa9.89□□□□□ -0.83
CLIP4-205ENST00000415891 BCCIPQ9P287 314 aaKnown RBP eCLIP9.88□□□□□ -0.83
CLIP4-205ENST00000415891 ZEB1P37275 1124 aaPredicted RBP9.86□□□□□ -0.83
CLIP4-205ENST00000415891 ERICH6BQ5W0A0 696 aa9.86□□□□□ -0.83
CLIP4-205ENST00000415891 KDM2AQ9Y2K7 1162 aa9.86□□□□□ -0.83
CLIP4-205ENST00000415891 PAXIP1Q6ZW49 1069 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-205ENST00000415891 SALL2Q9Y467 1007 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-205ENST00000415891 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.81□□□□□ -0.84
CLIP4-205ENST00000415891 A0A0U1RQG5 324 aaPredicted RBP9.8□□□□□ -0.84
CLIP4-205ENST00000415891 CLSPNQ9HAW4 1339 aa9.79□□□□□ -0.84
CLIP4-205ENST00000415891 NAP1L5Q96NT1 182 aaPredicted RBP9.78□□□□□ -0.84
CLIP4-205ENST00000415891 PUS7Q96PZ0 661 aaKnown RBP9.77□□□□□ -0.84
CLIP4-205ENST00000415891 POLR3GLQ9BT43 218 aa9.77□□□□□ -0.85
CLIP4-205ENST00000415891 RBM10P98175 930 aaKnown RBP9.75□□□□□ -0.85
CLIP4-205ENST00000415891 CFAP44Q96MT7 982 aa9.73□□□□□ -0.85
CLIP4-205ENST00000415891 CCDC9Q9Y3X0 531 aaKnown RBP9.73□□□□□ -0.85
CLIP4-205ENST00000415891 FBLN2P98095 1184 aa9.73□□□□□ -0.85
CLIP4-205ENST00000415891 ACIN1Q9UKV3 1341 aaKnown RBP9.72□□□□□ -0.85
CLIP4-205ENST00000415891 IRX6P78412 446 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms