RNA–Protein interactions for RNA: ENST00000415338.1

AC239798.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC239798.2, Length 3,540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239798.2-201ENST00000415338 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
AC239798.2-201ENST00000415338 RYR3Q15413 4870 aa7.28□□□□□ -1.24
AC239798.2-201ENST00000415338 A0A0A0MQY5 61 aa7.27□□□□□ -1.25
AC239798.2-201ENST00000415338 XP32Q5T750 250 aa7.27□□□□□ -1.25
AC239798.2-201ENST00000415338 RYR2Q92736 4967 aa7.27□□□□□ -1.25
AC239798.2-201ENST00000415338 RYR1P21817 5038 aa7.26□□□□□ -1.25
AC239798.2-201ENST00000415338 S4R3F8 94 aa7.25□□□□□ -1.25
AC239798.2-201ENST00000415338 H1FX-AS1Q4G0G2 97 aa7.25□□□□□ -1.25
AC239798.2-201ENST00000415338 H0YAA0 97 aa7.23□□□□□ -1.25
AC239798.2-201ENST00000415338 KRTAP10-8P60410 259 aa7.23□□□□□ -1.25
AC239798.2-201ENST00000415338 SPINT4Q6UDR6 99 aa7.23□□□□□ -1.25
AC239798.2-201ENST00000415338 RPL37P61927 97 aaKnown RBP7.22□□□□□ -1.25
AC239798.2-201ENST00000415338 KRTAP17-1Q9BYP8 105 aa7.16□□□□□ -1.26
AC239798.2-201ENST00000415338 KRTAP4-5Q9BYR2 181 aa7.13□□□□□ -1.27
AC239798.2-201ENST00000415338 HSPG2P98160 4391 aa7.1□□□□□ -1.27
AC239798.2-201ENST00000415338 P0C880 135 aa7.1□□□□□ -1.27
AC239798.2-201ENST00000415338 LRP2P98164 4655 aa7.07□□□□□ -1.28
AC239798.2-201ENST00000415338 MT1HL1P0DM35 61 aa7.05□□□□□ -1.28
AC239798.2-201ENST00000415338 PKHD1L1Q86WI1 4243 aa7.04□□□□□ -1.28
AC239798.2-201ENST00000415338 EPPK1P58107 5090 aaKnown RBP7.02□□□□□ -1.29
AC239798.2-201ENST00000415338 ROMO1P60602 79 aa7□□□□□ -1.29
AC239798.2-201ENST00000415338 LPAP08519 4548 aa6.98□□□□□ -1.29
AC239798.2-201ENST00000415338 KRTAP13-4Q3LI77 160 aa6.97□□□□□ -1.29
AC239798.2-201ENST00000415338 M0QZ58 72 aa6.95□□□□□ -1.3
AC239798.2-201ENST00000415338 KRTAP3-3Q9BYR6 98 aa6.93□□□□□ -1.3
AC239798.2-201ENST00000415338 C10orf95Q9H7T3 257 aa6.93□□□□□ -1.3
AC239798.2-201ENST00000415338 R4GN34 69 aa6.93□□□□□ -1.3
AC239798.2-201ENST00000415338 KRTAP10-6P60371 365 aaPredicted RBP6.9□□□□□ -1.3
AC239798.2-201ENST00000415338 SEC61BP60468 96 aaKnown RBP6.9□□□□□ -1.31
AC239798.2-201ENST00000415338 ABCA13Q86UQ4 5058 aa6.89□□□□□ -1.31
AC239798.2-201ENST00000415338 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
AC239798.2-201ENST00000415338 TNXBP22105 4242 aa6.86□□□□□ -1.31
AC239798.2-201ENST00000415338 KRTAP25-1Q3LHN0 102 aa6.85□□□□□ -1.31
AC239798.2-201ENST00000415338 NDUFAF8A1L188 74 aa6.83□□□□□ -1.32
AC239798.2-201ENST00000415338 KRTAP3-2Q9BYR7 98 aa6.81□□□□□ -1.32
AC239798.2-201ENST00000415338 KRTAP12-2P59991 146 aa6.8□□□□□ -1.32
AC239798.2-201ENST00000415338 MUC2Q02817 5179 aa6.79□□□□□ -1.32
AC239798.2-201ENST00000415338 HERC2O95714 4834 aa6.77□□□□□ -1.32
AC239798.2-201ENST00000415338 CAMK2N1Q7Z7J9 78 aa6.74□□□□□ -1.33
AC239798.2-201ENST00000415338 M0R2T5 61 aa6.73□□□□□ -1.33
AC239798.2-201ENST00000415338 KRTAP12-1P59990 96 aa6.65□□□□□ -1.34
AC239798.2-201ENST00000415338 KRTAP4-1Q9BYQ7 146 aa6.64□□□□□ -1.35
AC239798.2-201ENST00000415338 LUZP6Q538Z0 58 aa6.62□□□□□ -1.35
AC239798.2-201ENST00000415338 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
AC239798.2-201ENST00000415338 HERC1Q15751 4861 aa6.58□□□□□ -1.36
AC239798.2-201ENST00000415338 RNF213Q63HN8 5207 aa6.51□□□□□ -1.37
AC239798.2-201ENST00000415338 FAT4Q6V0I7 4981 aa6.45□□□□□ -1.38
AC239798.2-201ENST00000415338 PCLOQ9Y6V0 5065 aa6.37□□□□□ -1.39
AC239798.2-201ENST00000415338 UBR4Q5T4S7 5183 aa6.3□□□□□ -1.4
AC239798.2-201ENST00000415338 BIRC6Q9NR09 4857 aa6.29□□□□□ -1.4
AC239798.2-201ENST00000415338 KRTAP10-10P60014 251 aa6.27□□□□□ -1.41
AC239798.2-201ENST00000415338 PLAC4Q8WY50 150 aa6.26□□□□□ -1.41
AC239798.2-201ENST00000415338 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
AC239798.2-201ENST00000415338 MUC17Q685J3 4493 aa6.19□□□□□ -1.42
AC239798.2-201ENST00000415338 TNP1P09430 55 aa6.17□□□□□ -1.42
AC239798.2-201ENST00000415338 HMCN2Q8NDA2 5059 aa6.09□□□□□ -1.44
AC239798.2-201ENST00000415338 KRTAP19-2Q3LHN2 52 aa6.05□□□□□ -1.44
AC239798.2-201ENST00000415338 FLGP20930 4061 aaPredicted RBP6.05□□□□□ -1.44
AC239798.2-201ENST00000415338 MT1HP80294 61 aa5.95□□□□□ -1.46
AC239798.2-201ENST00000415338 PP632Q6XCG6 107 aa5.94□□□□□ -1.46
AC239798.2-201ENST00000415338 LCE2CQ5TA81 110 aa5.92□□□□□ -1.46
AC239798.2-201ENST00000415338 FSIP2Q5CZC0 6907 aa5.91□□□□□ -1.46
AC239798.2-201ENST00000415338 MT1FP04733 61 aa5.9□□□□□ -1.47
AC239798.2-201ENST00000415338 MT2AP02795 61 aa5.86□□□□□ -1.47
AC239798.2-201ENST00000415338 KRTAP19-1Q8IUB9 90 aa5.83□□□□□ -1.48
AC239798.2-201ENST00000415338 USH2AO75445 5202 aa5.79□□□□□ -1.48
AC239798.2-201ENST00000415338 LCE3AQ5TA76 89 aa5.78□□□□□ -1.48
AC239798.2-201ENST00000415338 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
AC239798.2-201ENST00000415338 KRTAP9-8Q9BYQ0 159 aa5.68□□□□□ -1.5
AC239798.2-201ENST00000415338 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
AC239798.2-201ENST00000415338 KMT2DO14686 5537 aa5.59□□□□□ -1.51
AC239798.2-201ENST00000415338 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
AC239798.2-201ENST00000415338 MT1BP07438 61 aa5.53□□□□□ -1.52
AC239798.2-201ENST00000415338 KRTAP10-7P60409 375 aaPredicted RBP5.51□□□□□ -1.53
AC239798.2-201ENST00000415338 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
AC239798.2-201ENST00000415338 MT1XP80297 61 aa5.49□□□□□ -1.53
AC239798.2-201ENST00000415338 KRTAP10-5P60370 271 aa5.48□□□□□ -1.53
AC239798.2-201ENST00000415338 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
AC239798.2-201ENST00000415338 KRTAP19-8Q3LI54 63 aa5.42□□□□□ -1.54
AC239798.2-201ENST00000415338 KRTAP4-8A0A0G2JLE6 195 aa5.36□□□□□ -1.55
AC239798.2-201ENST00000415338 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
AC239798.2-201ENST00000415338 LCE2BO14633 110 aa5.36□□□□□ -1.55
AC239798.2-201ENST00000415338 KRTAP4-8Q9BYQ9 185 aa5.36□□□□□ -1.55
AC239798.2-201ENST00000415338 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
AC239798.2-201ENST00000415338 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
AC239798.2-201ENST00000415338 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
AC239798.2-201ENST00000415338 CRCT1Q9UGL9 99 aa5.17□□□□□ -1.58
AC239798.2-201ENST00000415338 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
AC239798.2-201ENST00000415338 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
AC239798.2-201ENST00000415338 LCE2AQ5TA79 106 aaPredicted RBP5.09□□□□□ -1.59
AC239798.2-201ENST00000415338 INE1O15225 51 aa5.08□□□□□ -1.6
AC239798.2-201ENST00000415338 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
AC239798.2-201ENST00000415338 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
AC239798.2-201ENST00000415338 FCGBPQ9Y6R7 5405 aaPredicted RBP5.03□□□□□ -1.6
AC239798.2-201ENST00000415338 MUC12Q9UKN1 5478 aa5.03□□□□□ -1.6
AC239798.2-201ENST00000415338 SSPOA2VEC9 5147 aa5.03□□□□□ -1.6
AC239798.2-201ENST00000415338 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
AC239798.2-201ENST00000415338 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
AC239798.2-201ENST00000415338 KRTAP4-3Q9BYR4 195 aa4.83□□□□□ -1.64
AC239798.2-201ENST00000415338 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms