RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 ANK2Q01484 3957 aa6.55□□□□□ -1.36
CLTCL1-201ENST00000412649 VPS13DQ5THJ4 4388 aa6.55□□□□□ -1.36
CLTCL1-201ENST00000412649 DNAH11Q96DT5 4516 aa6.54□□□□□ -1.36
CLTCL1-201ENST00000412649 KRTAP10-4P60372 401 aaPredicted RBP6.49□□□□□ -1.37
CLTCL1-201ENST00000412649 FRAS1Q86XX4 4008 aa6.48□□□□□ -1.37
CLTCL1-201ENST00000412649 LYSTQ99698 3801 aa6.45□□□□□ -1.38
CLTCL1-201ENST00000412649 DNAH2Q9P225 4427 aa6.45□□□□□ -1.38
CLTCL1-201ENST00000412649 STARD9Q9P2P6 4700 aa6.41□□□□□ -1.38
CLTCL1-201ENST00000412649 LRP1BQ9NZR2 4599 aa6.41□□□□□ -1.38
CLTCL1-201ENST00000412649 HECTD4Q9Y4D8 3996 aa6.33□□□□□ -1.4
CLTCL1-201ENST00000412649 CMYA5Q8N3K9 4069 aa6.33□□□□□ -1.4
CLTCL1-201ENST00000412649 KMT2AQ03164 3969 aa6.3□□□□□ -1.4
CLTCL1-201ENST00000412649 DNAH7Q8WXX0 4024 aa6.29□□□□□ -1.4
CLTCL1-201ENST00000412649 DNAH5Q8TE73 4624 aa6.29□□□□□ -1.4
CLTCL1-201ENST00000412649 DYNC2H1Q8NCM8 4307 aaKnown RBP6.28□□□□□ -1.4
CLTCL1-201ENST00000412649 VPS13BQ7Z7G8 4022 aa6.24□□□□□ -1.41
CLTCL1-201ENST00000412649 MT1HL1P0DM35 61 aa6.22□□□□□ -1.41
CLTCL1-201ENST00000412649 LORP23490 312 aaPredicted RBP6.22□□□□□ -1.41
CLTCL1-201ENST00000412649 DNAH6Q9C0G6 4158 aa6.19□□□□□ -1.42
CLTCL1-201ENST00000412649 PRO2289Q9P1D8 64 aa6.16□□□□□ -1.42
CLTCL1-201ENST00000412649 SACSQ9NZJ4 4579 aa6.16□□□□□ -1.42
CLTCL1-201ENST00000412649 FAT1Q14517 4588 aa6.14□□□□□ -1.43
CLTCL1-201ENST00000412649 INE1O15225 51 aa6.13□□□□□ -1.43
CLTCL1-201ENST00000412649 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
CLTCL1-201ENST00000412649 PRKDCP78527 4128 aaKnown RBP6.12□□□□□ -1.43
CLTCL1-201ENST00000412649 KRTAP10-10P60014 251 aa6.1□□□□□ -1.43
CLTCL1-201ENST00000412649 DYNC1H1Q14204 4646 aaKnown RBP6.06□□□□□ -1.44
CLTCL1-201ENST00000412649 APOBP04114 4563 aaKnown RBP5.96□□□□□ -1.46
CLTCL1-201ENST00000412649 MYCBP2O75592 4640 aa5.94□□□□□ -1.46
CLTCL1-201ENST00000412649 FAT2Q9NYQ8 4349 aa5.93□□□□□ -1.46
CLTCL1-201ENST00000412649 LCE3AQ5TA76 89 aa5.86□□□□□ -1.47
CLTCL1-201ENST00000412649 FAT3Q8TDW7 4589 aa5.83□□□□□ -1.48
CLTCL1-201ENST00000412649 DNHD1Q96M86 4753 aa5.79□□□□□ -1.48
CLTCL1-201ENST00000412649 LRP1Q07954 4544 aaKnown RBP5.78□□□□□ -1.48
CLTCL1-201ENST00000412649 KRTAP4-1Q9BYQ7 146 aa5.78□□□□□ -1.48
CLTCL1-201ENST00000412649 PKD1P98161 4303 aa5.77□□□□□ -1.49
CLTCL1-201ENST00000412649 PKHD1P08F94 4074 aa5.74□□□□□ -1.49
CLTCL1-201ENST00000412649 HYDINQ4G0P3 5121 aa5.73□□□□□ -1.49
CLTCL1-201ENST00000412649 KRTAP12-3P60328 96 aa5.73□□□□□ -1.49
CLTCL1-201ENST00000412649 SPRR5A0A1B0GTR4 108 aa5.73□□□□□ -1.49
CLTCL1-201ENST00000412649 KRTAP10-12P60413 245 aa5.71□□□□□ -1.5
CLTCL1-201ENST00000412649 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
CLTCL1-201ENST00000412649 PKHD1L1Q86WI1 4243 aa5.68□□□□□ -1.5
CLTCL1-201ENST00000412649 HSPG2P98160 4391 aa5.63□□□□□ -1.51
CLTCL1-201ENST00000412649 LRP2P98164 4655 aa5.6□□□□□ -1.51
CLTCL1-201ENST00000412649 RYR1P21817 5038 aa5.57□□□□□ -1.52
CLTCL1-201ENST00000412649 SPRR2GQ9BYE4 73 aa5.55□□□□□ -1.52
CLTCL1-201ENST00000412649 KRTAP17-1Q9BYP8 105 aa5.52□□□□□ -1.53
CLTCL1-201ENST00000412649 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
CLTCL1-201ENST00000412649 TNXBP22105 4242 aa5.45□□□□□ -1.54
CLTCL1-201ENST00000412649 KIAA1109Q2LD37 5005 aa5.45□□□□□ -1.54
CLTCL1-201ENST00000412649 KMT2CQ8NEZ4 4911 aaKnown RBP5.43□□□□□ -1.54
CLTCL1-201ENST00000412649 RYR2Q92736 4967 aa5.37□□□□□ -1.55
CLTCL1-201ENST00000412649 KRTAP19-1Q8IUB9 90 aa5.36□□□□□ -1.55
CLTCL1-201ENST00000412649 RYR3Q15413 4870 aa5.35□□□□□ -1.55
CLTCL1-201ENST00000412649 LPAP08519 4548 aa5.32□□□□□ -1.56
CLTCL1-201ENST00000412649 MT2AP02795 61 aa5.3□□□□□ -1.56
CLTCL1-201ENST00000412649 MT1FP04733 61 aa5.27□□□□□ -1.57
CLTCL1-201ENST00000412649 KRTAP19-2Q3LHN2 52 aa5.26□□□□□ -1.57
CLTCL1-201ENST00000412649 MT1HP80294 61 aa5.25□□□□□ -1.57
CLTCL1-201ENST00000412649 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
CLTCL1-201ENST00000412649 KRTAP19-5Q3LI72 72 aa5.17□□□□□ -1.58
CLTCL1-201ENST00000412649 KRTAP19-8Q3LI54 63 aa5.17□□□□□ -1.58
CLTCL1-201ENST00000412649 MT1XP80297 61 aa5.14□□□□□ -1.59
CLTCL1-201ENST00000412649 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
CLTCL1-201ENST00000412649 KRTAP10-5P60370 271 aa5.13□□□□□ -1.59
CLTCL1-201ENST00000412649 MUC17Q685J3 4493 aa5.13□□□□□ -1.59
CLTCL1-201ENST00000412649 FLGP20930 4061 aaPredicted RBP5.06□□□□□ -1.6
CLTCL1-201ENST00000412649 MT1BP07438 61 aa5.05□□□□□ -1.6
CLTCL1-201ENST00000412649 LCE2CQ5TA81 110 aa5.04□□□□□ -1.6
CLTCL1-201ENST00000412649 CRCT1Q9UGL9 99 aa5.02□□□□□ -1.61
CLTCL1-201ENST00000412649 HERC1Q15751 4861 aa4.97□□□□□ -1.61
CLTCL1-201ENST00000412649 KRTAP9-8Q9BYQ0 159 aa4.96□□□□□ -1.61
CLTCL1-201ENST00000412649 HERC2O95714 4834 aa4.91□□□□□ -1.62
CLTCL1-201ENST00000412649 ABCA13Q86UQ4 5058 aa4.88□□□□□ -1.63
CLTCL1-201ENST00000412649 KRTAP19-4Q3LI73 84 aa4.88□□□□□ -1.63
CLTCL1-201ENST00000412649 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
CLTCL1-201ENST00000412649 BIRC6Q9NR09 4857 aa4.76□□□□□ -1.65
CLTCL1-201ENST00000412649 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
CLTCL1-201ENST00000412649 KRTAP4-8Q9BYQ9 185 aa4.76□□□□□ -1.65
CLTCL1-201ENST00000412649 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
CLTCL1-201ENST00000412649 EPPK1P58107 5090 aaKnown RBP4.72□□□□□ -1.65
CLTCL1-201ENST00000412649 MUC2Q02817 5179 aa4.71□□□□□ -1.66
CLTCL1-201ENST00000412649 HMCN2Q8NDA2 5059 aa4.7□□□□□ -1.66
CLTCL1-201ENST00000412649 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
CLTCL1-201ENST00000412649 KRTAP2-3P0C7H8 128 aa4.65□□□□□ -1.67
CLTCL1-201ENST00000412649 SPRR2FQ96RM1 72 aa4.65□□□□□ -1.67
CLTCL1-201ENST00000412649 KRTAP2-4Q9BYR9 128 aa4.65□□□□□ -1.67
CLTCL1-201ENST00000412649 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.67
CLTCL1-201ENST00000412649 FAT4Q6V0I7 4981 aa4.57□□□□□ -1.68
CLTCL1-201ENST00000412649 MT1LQ93083 61 aa4.57□□□□□ -1.68
CLTCL1-201ENST00000412649 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
CLTCL1-201ENST00000412649 MT1GP13640 62 aa4.56□□□□□ -1.68
CLTCL1-201ENST00000412649 PCLOQ9Y6V0 5065 aa4.52□□□□□ -1.69
CLTCL1-201ENST00000412649 LCE2BO14633 110 aa4.52□□□□□ -1.69
CLTCL1-201ENST00000412649 MT1EP04732 61 aa4.49□□□□□ -1.69
CLTCL1-201ENST00000412649 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
CLTCL1-201ENST00000412649 UBR4Q5T4S7 5183 aa4.47□□□□□ -1.69
CLTCL1-201ENST00000412649 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
CLTCL1-201ENST00000412649 RNF213Q63HN8 5207 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms