RNA–Protein interactions for RNA: ENST00000412135.6

FGFR3-204, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 5 BASIC

Gene FGFR3, Length 3,951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-204ENST00000412135 XP32Q5T750 250 aa8.36□□□□□ -1.07
FGFR3-204ENST00000412135 ALMS1Q8TCU4 4167 aa8.36□□□□□ -1.07
FGFR3-204ENST00000412135 DNAH3Q8TD57 4116 aa8.35□□□□□ -1.07
FGFR3-204ENST00000412135 KRTAP10-6P60371 365 aaPredicted RBP8.35□□□□□ -1.07
FGFR3-204ENST00000412135 A0A0A0MQY5 61 aa8.35□□□□□ -1.07
FGFR3-204ENST00000412135 VPS13BQ7Z7G8 4022 aa8.35□□□□□ -1.07
FGFR3-204ENST00000412135 LUZP6Q538Z0 58 aa8.3□□□□□ -1.08
FGFR3-204ENST00000412135 KRTAP3-3Q9BYR6 98 aa8.21□□□□□ -1.1
FGFR3-204ENST00000412135 KRTAP12-1P59990 96 aa8.18□□□□□ -1.1
FGFR3-204ENST00000412135 KRTAP3-2Q9BYR7 98 aa8.17□□□□□ -1.1
FGFR3-204ENST00000412135 HYDINQ4G0P3 5121 aa8.15□□□□□ -1.1
FGFR3-204ENST00000412135 DYNC1H1Q14204 4646 aaKnown RBP8.14□□□□□ -1.11
FGFR3-204ENST00000412135 FAT3Q8TDW7 4589 aa8.13□□□□□ -1.11
FGFR3-204ENST00000412135 PKHD1P08F94 4074 aa8.13□□□□□ -1.11
FGFR3-204ENST00000412135 LRP1Q07954 4544 aaKnown RBP8.11□□□□□ -1.11
FGFR3-204ENST00000412135 DYNC2H1Q8NCM8 4307 aaKnown RBP8.08□□□□□ -1.12
FGFR3-204ENST00000412135 PLAC4Q8WY50 150 aa8.07□□□□□ -1.12
FGFR3-204ENST00000412135 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
FGFR3-204ENST00000412135 FAT2Q9NYQ8 4349 aa8.01□□□□□ -1.13
FGFR3-204ENST00000412135 A0A1B0GVY2 172 aa8.01□□□□□ -1.13
FGFR3-204ENST00000412135 KRTAP15-1Q3LI76 137 aa7.98□□□□□ -1.13
FGFR3-204ENST00000412135 M0R2T5 61 aa7.97□□□□□ -1.13
FGFR3-204ENST00000412135 KRTAP10-4P60372 401 aaPredicted RBP7.95□□□□□ -1.14
FGFR3-204ENST00000412135 SACSQ9NZJ4 4579 aa7.94□□□□□ -1.14
FGFR3-204ENST00000412135 SEC61BP60468 96 aaKnown RBP7.91□□□□□ -1.14
FGFR3-204ENST00000412135 LORP23490 312 aaPredicted RBP7.79□□□□□ -1.16
FGFR3-204ENST00000412135 KRTAP21-3Q3LHN1 58 aa7.78□□□□□ -1.16
FGFR3-204ENST00000412135 KIAA1109Q2LD37 5005 aa7.77□□□□□ -1.17
FGFR3-204ENST00000412135 LRP2P98164 4655 aa7.77□□□□□ -1.17
FGFR3-204ENST00000412135 RYR1P21817 5038 aa7.76□□□□□ -1.17
FGFR3-204ENST00000412135 HSPG2P98160 4391 aa7.74□□□□□ -1.17
FGFR3-204ENST00000412135 PKD1P98161 4303 aa7.7□□□□□ -1.18
FGFR3-204ENST00000412135 MT1HL1P0DM35 61 aa7.67□□□□□ -1.18
FGFR3-204ENST00000412135 TNP1P09430 55 aa7.67□□□□□ -1.18
FGFR3-204ENST00000412135 KMT2CQ8NEZ4 4911 aaKnown RBP7.62□□□□□ -1.19
FGFR3-204ENST00000412135 KRTAP4-5Q9BYR2 181 aa7.62□□□□□ -1.19
FGFR3-204ENST00000412135 LPAP08519 4548 aa7.53□□□□□ -1.2
FGFR3-204ENST00000412135 RYR3Q15413 4870 aa7.53□□□□□ -1.2
FGFR3-204ENST00000412135 KRTAP17-1Q9BYP8 105 aa7.52□□□□□ -1.21
FGFR3-204ENST00000412135 PP632Q6XCG6 107 aa7.5□□□□□ -1.21
FGFR3-204ENST00000412135 PKHD1L1Q86WI1 4243 aa7.38□□□□□ -1.23
FGFR3-204ENST00000412135 KRTAP4-1Q9BYQ7 146 aa7.36□□□□□ -1.23
FGFR3-204ENST00000412135 EPPK1P58107 5090 aaKnown RBP7.28□□□□□ -1.24
FGFR3-204ENST00000412135 RYR2Q92736 4967 aa7.27□□□□□ -1.25
FGFR3-204ENST00000412135 MUC2Q02817 5179 aa7.26□□□□□ -1.25
FGFR3-204ENST00000412135 KRTAP10-10P60014 251 aa7.25□□□□□ -1.25
FGFR3-204ENST00000412135 ABCA13Q86UQ4 5058 aa7.16□□□□□ -1.26
FGFR3-204ENST00000412135 TNXBP22105 4242 aa7.16□□□□□ -1.26
FGFR3-204ENST00000412135 LCE3AQ5TA76 89 aa7.01□□□□□ -1.29
FGFR3-204ENST00000412135 HERC2O95714 4834 aa7□□□□□ -1.29
FGFR3-204ENST00000412135 FAT4Q6V0I7 4981 aa6.92□□□□□ -1.3
FGFR3-204ENST00000412135 PCLOQ9Y6V0 5065 aa6.89□□□□□ -1.31
FGFR3-204ENST00000412135 RNF213Q63HN8 5207 aa6.8□□□□□ -1.32
FGFR3-204ENST00000412135 KRTAP12-3P60328 96 aa6.68□□□□□ -1.34
FGFR3-204ENST00000412135 HERC1Q15751 4861 aa6.68□□□□□ -1.34
FGFR3-204ENST00000412135 FSIP2Q5CZC0 6907 aa6.67□□□□□ -1.34
FGFR3-204ENST00000412135 KRTAP10-12P60413 245 aa6.66□□□□□ -1.34
FGFR3-204ENST00000412135 PRO2289Q9P1D8 64 aa6.61□□□□□ -1.35
FGFR3-204ENST00000412135 MUC17Q685J3 4493 aa6.59□□□□□ -1.35
FGFR3-204ENST00000412135 HMCN2Q8NDA2 5059 aa6.57□□□□□ -1.36
FGFR3-204ENST00000412135 KRTAP19-1Q8IUB9 90 aa6.57□□□□□ -1.36
FGFR3-204ENST00000412135 MT1FP04733 61 aa6.56□□□□□ -1.36
FGFR3-204ENST00000412135 KRTAP19-2Q3LHN2 52 aa6.54□□□□□ -1.36
FGFR3-204ENST00000412135 UBR4Q5T4S7 5183 aa6.52□□□□□ -1.37
FGFR3-204ENST00000412135 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
FGFR3-204ENST00000412135 MT2AP02795 61 aa6.5□□□□□ -1.37
FGFR3-204ENST00000412135 SPRR2GQ9BYE4 73 aa6.48□□□□□ -1.37
FGFR3-204ENST00000412135 MT1HP80294 61 aa6.47□□□□□ -1.37
FGFR3-204ENST00000412135 FLGP20930 4061 aaPredicted RBP6.46□□□□□ -1.37
FGFR3-204ENST00000412135 INE1O15225 51 aa6.43□□□□□ -1.38
FGFR3-204ENST00000412135 SPRR5A0A1B0GTR4 108 aa6.42□□□□□ -1.38
FGFR3-204ENST00000412135 KRTAP10-7P60409 375 aaPredicted RBP6.38□□□□□ -1.39
FGFR3-204ENST00000412135 CRCT1Q9UGL9 99 aa6.37□□□□□ -1.39
FGFR3-204ENST00000412135 BIRC6Q9NR09 4857 aa6.35□□□□□ -1.39
FGFR3-204ENST00000412135 LCE2CQ5TA81 110 aa6.33□□□□□ -1.4
FGFR3-204ENST00000412135 KRTAP8-1Q8IUC2 63 aa6.32□□□□□ -1.4
FGFR3-204ENST00000412135 KMT2DO14686 5537 aa6.26□□□□□ -1.41
FGFR3-204ENST00000412135 OBSCNQ5VST9 7968 aa6.25□□□□□ -1.41
FGFR3-204ENST00000412135 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
FGFR3-204ENST00000412135 USH2AO75445 5202 aa6.25□□□□□ -1.41
FGFR3-204ENST00000412135 MT1XP80297 61 aa6.24□□□□□ -1.41
FGFR3-204ENST00000412135 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
FGFR3-204ENST00000412135 MT1BP07438 61 aa6.18□□□□□ -1.42
FGFR3-204ENST00000412135 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
FGFR3-204ENST00000412135 KRTAP4-8A0A0G2JLE6 195 aa6.16□□□□□ -1.42
FGFR3-204ENST00000412135 KRTAP4-8Q9BYQ9 185 aa6.16□□□□□ -1.42
FGFR3-204ENST00000412135 KRTAP4-7Q9BYR0 210 aa6.09□□□□□ -1.43
FGFR3-204ENST00000412135 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
FGFR3-204ENST00000412135 SYNE1Q8NF91 8797 aaKnown RBP6.06□□□□□ -1.44
FGFR3-204ENST00000412135 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
FGFR3-204ENST00000412135 DSTQ03001 7570 aaKnown RBP5.98□□□□□ -1.45
FGFR3-204ENST00000412135 FCGBPQ9Y6R7 5405 aaPredicted RBP5.9□□□□□ -1.47
FGFR3-204ENST00000412135 KRTAP9-3Q9BYQ3 159 aa5.86□□□□□ -1.47
FGFR3-204ENST00000412135 LCE2BO14633 110 aa5.78□□□□□ -1.48
FGFR3-204ENST00000412135 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
FGFR3-204ENST00000412135 MT1GP13640 62 aa5.65□□□□□ -1.51
FGFR3-204ENST00000412135 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
FGFR3-204ENST00000412135 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
FGFR3-204ENST00000412135 KRTAP12-4P60329 112 aa5.57□□□□□ -1.52
FGFR3-204ENST00000412135 MUC12Q9UKN1 5478 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms