RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 P0C880 135 aa6.3□□□□□ -1.4
PCNX4-204ENST00000406949 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
PCNX4-204ENST00000406949 FAT3Q8TDW7 4589 aa6.28□□□□□ -1.4
PCNX4-204ENST00000406949 H1FX-AS1Q4G0G2 97 aa6.26□□□□□ -1.41
PCNX4-204ENST00000406949 J3QL48 77 aa6.25□□□□□ -1.41
PCNX4-204ENST00000406949 RPL37P61927 97 aaKnown RBP6.23□□□□□ -1.41
PCNX4-204ENST00000406949 H0YAA0 97 aa6.22□□□□□ -1.41
PCNX4-204ENST00000406949 S4R3F8 94 aa6.22□□□□□ -1.41
PCNX4-204ENST00000406949 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
PCNX4-204ENST00000406949 XP32Q5T750 250 aa6.22□□□□□ -1.41
PCNX4-204ENST00000406949 KRTAP10-8P60410 259 aa6.21□□□□□ -1.41
PCNX4-204ENST00000406949 LRP1Q07954 4544 aaKnown RBP6.21□□□□□ -1.42
PCNX4-204ENST00000406949 KMT2CQ8NEZ4 4911 aaKnown RBP6.2□□□□□ -1.42
PCNX4-204ENST00000406949 RYR2Q92736 4967 aa6.14□□□□□ -1.43
PCNX4-204ENST00000406949 KIAA1109Q2LD37 5005 aa6.08□□□□□ -1.44
PCNX4-204ENST00000406949 MT1HL1P0DM35 61 aa6.03□□□□□ -1.44
PCNX4-204ENST00000406949 RYR3Q15413 4870 aa6.02□□□□□ -1.45
PCNX4-204ENST00000406949 SEC61BP60468 96 aaKnown RBP6.02□□□□□ -1.45
PCNX4-204ENST00000406949 RYR1P21817 5038 aa6□□□□□ -1.45
PCNX4-204ENST00000406949 KRTAP17-1Q9BYP8 105 aa6□□□□□ -1.45
PCNX4-204ENST00000406949 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
PCNX4-204ENST00000406949 PKHD1L1Q86WI1 4243 aa5.98□□□□□ -1.45
PCNX4-204ENST00000406949 KRTAP3-3Q9BYR6 98 aa5.98□□□□□ -1.45
PCNX4-204ENST00000406949 HSPG2P98160 4391 aa5.97□□□□□ -1.45
PCNX4-204ENST00000406949 KRTAP10-6P60371 365 aaPredicted RBP5.95□□□□□ -1.46
PCNX4-204ENST00000406949 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
PCNX4-204ENST00000406949 TPRXLQ17RH7 258 aa5.95□□□□□ -1.46
PCNX4-204ENST00000406949 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
PCNX4-204ENST00000406949 M0QZ58 72 aa5.9□□□□□ -1.47
PCNX4-204ENST00000406949 R4GN34 69 aa5.89□□□□□ -1.47
PCNX4-204ENST00000406949 KRTAP3-2Q9BYR7 98 aa5.88□□□□□ -1.47
PCNX4-204ENST00000406949 TNXBP22105 4242 aa5.88□□□□□ -1.47
PCNX4-204ENST00000406949 LRP2P98164 4655 aa5.88□□□□□ -1.47
PCNX4-204ENST00000406949 EPPK1P58107 5090 aaKnown RBP5.83□□□□□ -1.48
PCNX4-204ENST00000406949 KRTAP12-2P59991 146 aa5.81□□□□□ -1.48
PCNX4-204ENST00000406949 LPAP08519 4548 aa5.8□□□□□ -1.48
PCNX4-204ENST00000406949 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
PCNX4-204ENST00000406949 MUC2Q02817 5179 aa5.76□□□□□ -1.49
PCNX4-204ENST00000406949 LCE2DQ5TA82 110 aaPredicted RBP5.73□□□□□ -1.49
PCNX4-204ENST00000406949 KRTAP12-1P59990 96 aa5.73□□□□□ -1.49
PCNX4-204ENST00000406949 CAMK2N1Q7Z7J9 78 aa5.69□□□□□ -1.5
PCNX4-204ENST00000406949 ABCA13Q86UQ4 5058 aa5.67□□□□□ -1.5
PCNX4-204ENST00000406949 KRTAP4-1Q9BYQ7 146 aa5.61□□□□□ -1.51
PCNX4-204ENST00000406949 HERC2O95714 4834 aa5.59□□□□□ -1.51
PCNX4-204ENST00000406949 M0R2T5 61 aa5.59□□□□□ -1.51
PCNX4-204ENST00000406949 LORP23490 312 aaPredicted RBP5.58□□□□□ -1.52
PCNX4-204ENST00000406949 PLAC4Q8WY50 150 aa5.54□□□□□ -1.52
PCNX4-204ENST00000406949 RNF213Q63HN8 5207 aa5.5□□□□□ -1.53
PCNX4-204ENST00000406949 FAT4Q6V0I7 4981 aa5.47□□□□□ -1.53
PCNX4-204ENST00000406949 HERC1Q15751 4861 aa5.43□□□□□ -1.54
PCNX4-204ENST00000406949 PCLOQ9Y6V0 5065 aa5.33□□□□□ -1.56
PCNX4-204ENST00000406949 TNP1P09430 55 aa5.31□□□□□ -1.56
PCNX4-204ENST00000406949 BIRC6Q9NR09 4857 aa5.31□□□□□ -1.56
PCNX4-204ENST00000406949 MUC17Q685J3 4493 aa5.3□□□□□ -1.56
PCNX4-204ENST00000406949 UBR4Q5T4S7 5183 aa5.27□□□□□ -1.57
PCNX4-204ENST00000406949 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
PCNX4-204ENST00000406949 KRTAP19-2Q3LHN2 52 aa5.25□□□□□ -1.57
PCNX4-204ENST00000406949 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
PCNX4-204ENST00000406949 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.58
PCNX4-204ENST00000406949 FLGP20930 4061 aaPredicted RBP5.19□□□□□ -1.58
PCNX4-204ENST00000406949 HMCN2Q8NDA2 5059 aa5.15□□□□□ -1.59
PCNX4-204ENST00000406949 PRO2289Q9P1D8 64 aa5.14□□□□□ -1.59
PCNX4-204ENST00000406949 LCE2BO14633 110 aa5.07□□□□□ -1.6
PCNX4-204ENST00000406949 MT1HP80294 61 aa5.07□□□□□ -1.6
PCNX4-204ENST00000406949 LCE2CQ5TA81 110 aa5.07□□□□□ -1.6
PCNX4-204ENST00000406949 MT1FP04733 61 aa5□□□□□ -1.61
PCNX4-204ENST00000406949 MT2AP02795 61 aa5□□□□□ -1.61
PCNX4-204ENST00000406949 KRTAP19-1Q8IUB9 90 aa5□□□□□ -1.61
PCNX4-204ENST00000406949 SPRR2GQ9BYE4 73 aa5□□□□□ -1.61
PCNX4-204ENST00000406949 USH2AO75445 5202 aa4.98□□□□□ -1.61
PCNX4-204ENST00000406949 LCE3AQ5TA76 89 aa4.93□□□□□ -1.62
PCNX4-204ENST00000406949 KRTAP9-8Q9BYQ0 159 aa4.86□□□□□ -1.63
PCNX4-204ENST00000406949 KMT2DO14686 5537 aa4.84□□□□□ -1.63
PCNX4-204ENST00000406949 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
PCNX4-204ENST00000406949 INE1O15225 51 aa4.83□□□□□ -1.64
PCNX4-204ENST00000406949 OBSCNQ5VST9 7968 aa4.82□□□□□ -1.64
PCNX4-204ENST00000406949 LCE2AQ5TA79 106 aaPredicted RBP4.81□□□□□ -1.64
PCNX4-204ENST00000406949 KRTAP10-12P60413 245 aa4.79□□□□□ -1.64
PCNX4-204ENST00000406949 MT1BP07438 61 aa4.75□□□□□ -1.65
PCNX4-204ENST00000406949 KRTAP19-8Q3LI54 63 aa4.74□□□□□ -1.65
PCNX4-204ENST00000406949 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
PCNX4-204ENST00000406949 MT1XP80297 61 aa4.71□□□□□ -1.65
PCNX4-204ENST00000406949 KRTAP10-5P60370 271 aa4.7□□□□□ -1.66
PCNX4-204ENST00000406949 KRTAP10-7P60409 375 aaPredicted RBP4.67□□□□□ -1.66
PCNX4-204ENST00000406949 KRTAP9-3Q9BYQ3 159 aa4.66□□□□□ -1.66
PCNX4-204ENST00000406949 DSTQ03001 7570 aaKnown RBP4.65□□□□□ -1.67
PCNX4-204ENST00000406949 KRTAP8-1Q8IUC2 63 aa4.63□□□□□ -1.67
PCNX4-204ENST00000406949 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
PCNX4-204ENST00000406949 SYNE1Q8NF91 8797 aaKnown RBP4.55□□□□□ -1.68
PCNX4-204ENST00000406949 KRTAP19-5Q3LI72 72 aa4.5□□□□□ -1.69
PCNX4-204ENST00000406949 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
PCNX4-204ENST00000406949 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
PCNX4-204ENST00000406949 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.69
PCNX4-204ENST00000406949 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.69
PCNX4-204ENST00000406949 KRTAP4-7Q9BYR0 210 aa4.35□□□□□ -1.71
PCNX4-204ENST00000406949 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
PCNX4-204ENST00000406949 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
PCNX4-204ENST00000406949 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
PCNX4-204ENST00000406949 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
PCNX4-204ENST00000406949 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms