RNA–Protein interactions for RNA: ENST00000406902.5

GRAMD4-202, Transcript of GRAM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRAMD4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-202ENST00000406902 ALMS1Q8TCU4 4167 aa6.72□□□□□ -1.33
GRAMD4-202ENST00000406902 VPS13DQ5THJ4 4388 aa6.71□□□□□ -1.34
GRAMD4-202ENST00000406902 DNAH1Q9P2D7 4330 aa6.66□□□□□ -1.34
GRAMD4-202ENST00000406902 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.34
GRAMD4-202ENST00000406902 DNAH10Q8IVF4 4471 aa6.62□□□□□ -1.35
GRAMD4-202ENST00000406902 DYNC2H1Q8NCM8 4307 aaKnown RBP6.54□□□□□ -1.36
GRAMD4-202ENST00000406902 DNAH17Q9UFH2 4485 aa6.53□□□□□ -1.36
GRAMD4-202ENST00000406902 DNAH11Q96DT5 4516 aa6.51□□□□□ -1.37
GRAMD4-202ENST00000406902 LYSTQ99698 3801 aa6.5□□□□□ -1.37
GRAMD4-202ENST00000406902 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
GRAMD4-202ENST00000406902 KMT2AQ03164 3969 aa6.5□□□□□ -1.37
GRAMD4-202ENST00000406902 KRTAP10-4P60372 401 aaPredicted RBP6.49□□□□□ -1.37
GRAMD4-202ENST00000406902 DNAH5Q8TE73 4624 aa6.48□□□□□ -1.37
GRAMD4-202ENST00000406902 MT1HL1P0DM35 61 aa6.47□□□□□ -1.37
GRAMD4-202ENST00000406902 DNAH7Q8WXX0 4024 aa6.47□□□□□ -1.37
GRAMD4-202ENST00000406902 DNAH2Q9P225 4427 aa6.41□□□□□ -1.38
GRAMD4-202ENST00000406902 DYNC1H1Q14204 4646 aaKnown RBP6.4□□□□□ -1.38
GRAMD4-202ENST00000406902 LRP1BQ9NZR2 4599 aa6.37□□□□□ -1.39
GRAMD4-202ENST00000406902 DNAH6Q9C0G6 4158 aa6.36□□□□□ -1.39
GRAMD4-202ENST00000406902 SACSQ9NZJ4 4579 aa6.35□□□□□ -1.39
GRAMD4-202ENST00000406902 KRTAP4-5Q9BYR2 181 aa6.33□□□□□ -1.4
GRAMD4-202ENST00000406902 HYDINQ4G0P3 5121 aa6.31□□□□□ -1.4
GRAMD4-202ENST00000406902 RYR2Q92736 4967 aa6.29□□□□□ -1.4
GRAMD4-202ENST00000406902 FAT1Q14517 4588 aa6.27□□□□□ -1.41
GRAMD4-202ENST00000406902 FAT2Q9NYQ8 4349 aa6.25□□□□□ -1.41
GRAMD4-202ENST00000406902 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
GRAMD4-202ENST00000406902 HECTD4Q9Y4D8 3996 aa6.23□□□□□ -1.41
GRAMD4-202ENST00000406902 FRAS1Q86XX4 4008 aa6.2□□□□□ -1.42
GRAMD4-202ENST00000406902 DNAH8Q96JB1 4490 aa6.2□□□□□ -1.42
GRAMD4-202ENST00000406902 KIAA1109Q2LD37 5005 aa6.17□□□□□ -1.42
GRAMD4-202ENST00000406902 KMT2CQ8NEZ4 4911 aaKnown RBP6.16□□□□□ -1.42
GRAMD4-202ENST00000406902 RYR3Q15413 4870 aa6.14□□□□□ -1.43
GRAMD4-202ENST00000406902 VPS13BQ7Z7G8 4022 aa6.11□□□□□ -1.43
GRAMD4-202ENST00000406902 APOBP04114 4563 aaKnown RBP6.11□□□□□ -1.43
GRAMD4-202ENST00000406902 RYR1P21817 5038 aa6.09□□□□□ -1.43
GRAMD4-202ENST00000406902 PKHD1P08F94 4074 aa6.08□□□□□ -1.44
GRAMD4-202ENST00000406902 KRTAP17-1Q9BYP8 105 aa6.08□□□□□ -1.44
GRAMD4-202ENST00000406902 PKD1P98161 4303 aa6.07□□□□□ -1.44
GRAMD4-202ENST00000406902 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
GRAMD4-202ENST00000406902 LORP23490 312 aaPredicted RBP5.96□□□□□ -1.46
GRAMD4-202ENST00000406902 KRTAP12-3P60328 96 aa5.96□□□□□ -1.46
GRAMD4-202ENST00000406902 HSPG2P98160 4391 aa5.94□□□□□ -1.46
GRAMD4-202ENST00000406902 LRP1Q07954 4544 aaKnown RBP5.93□□□□□ -1.46
GRAMD4-202ENST00000406902 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
GRAMD4-202ENST00000406902 BIRC6Q9NR09 4857 aa5.9□□□□□ -1.47
GRAMD4-202ENST00000406902 MYCBP2O75592 4640 aa5.87□□□□□ -1.47
GRAMD4-202ENST00000406902 EPPK1P58107 5090 aaKnown RBP5.86□□□□□ -1.47
GRAMD4-202ENST00000406902 HERC2O95714 4834 aa5.82□□□□□ -1.48
GRAMD4-202ENST00000406902 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
GRAMD4-202ENST00000406902 CRCT1Q9UGL9 99 aa5.77□□□□□ -1.49
GRAMD4-202ENST00000406902 FAT3Q8TDW7 4589 aa5.73□□□□□ -1.49
GRAMD4-202ENST00000406902 KRTAP4-1Q9BYQ7 146 aa5.68□□□□□ -1.5
GRAMD4-202ENST00000406902 ABCA13Q86UQ4 5058 aa5.64□□□□□ -1.51
GRAMD4-202ENST00000406902 MT1HP80294 61 aa5.61□□□□□ -1.51
GRAMD4-202ENST00000406902 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
GRAMD4-202ENST00000406902 TNXBP22105 4242 aa5.6□□□□□ -1.51
GRAMD4-202ENST00000406902 PKHD1L1Q86WI1 4243 aa5.6□□□□□ -1.51
GRAMD4-202ENST00000406902 KRTAP10-5P60370 271 aa5.57□□□□□ -1.52
GRAMD4-202ENST00000406902 LRP2P98164 4655 aa5.54□□□□□ -1.52
GRAMD4-202ENST00000406902 MT2AP02795 61 aa5.53□□□□□ -1.52
GRAMD4-202ENST00000406902 SPRR2GQ9BYE4 73 aa5.46□□□□□ -1.54
GRAMD4-202ENST00000406902 HERC1Q15751 4861 aa5.45□□□□□ -1.54
GRAMD4-202ENST00000406902 LPAP08519 4548 aa5.45□□□□□ -1.54
GRAMD4-202ENST00000406902 PCLOQ9Y6V0 5065 aa5.44□□□□□ -1.54
GRAMD4-202ENST00000406902 SPRR2FQ96RM1 72 aa5.38□□□□□ -1.55
GRAMD4-202ENST00000406902 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
GRAMD4-202ENST00000406902 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
GRAMD4-202ENST00000406902 MT1FP04733 61 aa5.35□□□□□ -1.55
GRAMD4-202ENST00000406902 LCE3CQ5T5A8 94 aa5.27□□□□□ -1.57
GRAMD4-202ENST00000406902 LCE2CQ5TA81 110 aa5.21□□□□□ -1.57
GRAMD4-202ENST00000406902 HMCN2Q8NDA2 5059 aa5.21□□□□□ -1.58
GRAMD4-202ENST00000406902 KRTAP19-2Q3LHN2 52 aa5.18□□□□□ -1.58
GRAMD4-202ENST00000406902 MUC2Q02817 5179 aa5.17□□□□□ -1.58
GRAMD4-202ENST00000406902 KRTAP12-4P60329 112 aa5.14□□□□□ -1.59
GRAMD4-202ENST00000406902 KRTAP19-8Q3LI54 63 aa5.13□□□□□ -1.59
GRAMD4-202ENST00000406902 MUC17Q685J3 4493 aa5.1□□□□□ -1.59
GRAMD4-202ENST00000406902 RNF213Q63HN8 5207 aa5.1□□□□□ -1.59
GRAMD4-202ENST00000406902 KRTAP19-5Q3LI72 72 aa5.1□□□□□ -1.59
GRAMD4-202ENST00000406902 SPRR2EP22531 72 aa5.09□□□□□ -1.6
GRAMD4-202ENST00000406902 SPRR2BP35325 72 aa5.09□□□□□ -1.6
GRAMD4-202ENST00000406902 SPRR2AP35326 72 aa5.09□□□□□ -1.6
GRAMD4-202ENST00000406902 UBR4Q5T4S7 5183 aa5.04□□□□□ -1.6
GRAMD4-202ENST00000406902 KRTAP9-8Q9BYQ0 159 aa5.03□□□□□ -1.6
GRAMD4-202ENST00000406902 FLGP20930 4061 aaPredicted RBP5.03□□□□□ -1.6
GRAMD4-202ENST00000406902 KRTAP19-1Q8IUB9 90 aa5.02□□□□□ -1.61
GRAMD4-202ENST00000406902 FAT4Q6V0I7 4981 aa4.99□□□□□ -1.61
GRAMD4-202ENST00000406902 SPRR2DP22532 72 aa4.95□□□□□ -1.62
GRAMD4-202ENST00000406902 LCE2BO14633 110 aa4.93□□□□□ -1.62
GRAMD4-202ENST00000406902 KRTAP9-3Q9BYQ3 159 aa4.87□□□□□ -1.63
GRAMD4-202ENST00000406902 MT1GP13640 62 aa4.85□□□□□ -1.63
GRAMD4-202ENST00000406902 LCE2AQ5TA79 106 aaPredicted RBP4.84□□□□□ -1.63
GRAMD4-202ENST00000406902 MT1BP07438 61 aa4.84□□□□□ -1.63
GRAMD4-202ENST00000406902 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.64
GRAMD4-202ENST00000406902 MT1XP80297 61 aa4.82□□□□□ -1.64
GRAMD4-202ENST00000406902 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
GRAMD4-202ENST00000406902 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
GRAMD4-202ENST00000406902 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
GRAMD4-202ENST00000406902 FSIP2Q5CZC0 6907 aa4.71□□□□□ -1.66
GRAMD4-202ENST00000406902 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
GRAMD4-202ENST00000406902 LCE3DQ9BYE3 92 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 661.3 ms