RNA–Protein interactions for RNA: ENST00000405581.3

NRXN1-209, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 5,078 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-209ENST00000405581 LCE3AQ5TA76 89 aa7.35□□□□□ -1.23
NRXN1-209ENST00000405581 DNAH5Q8TE73 4624 aa7.28□□□□□ -1.24
NRXN1-209ENST00000405581 KRTAP8-1Q8IUC2 63 aa7.22□□□□□ -1.25
NRXN1-209ENST00000405581 LORP23490 312 aaPredicted RBP7.19□□□□□ -1.26
NRXN1-209ENST00000405581 DNAH1Q9P2D7 4330 aa7.14□□□□□ -1.27
NRXN1-209ENST00000405581 AKAP9Q99996 3911 aa7.13□□□□□ -1.27
NRXN1-209ENST00000405581 DNAH10Q8IVF4 4471 aa7.13□□□□□ -1.27
NRXN1-209ENST00000405581 PLECQ15149 4684 aaKnown RBP7.13□□□□□ -1.27
NRXN1-209ENST00000405581 DNAH11Q96DT5 4516 aa7.13□□□□□ -1.27
NRXN1-209ENST00000405581 ZNF469Q96JG9 3925 aaPredicted RBP7.1□□□□□ -1.27
NRXN1-209ENST00000405581 DNHD1Q96M86 4753 aa7.07□□□□□ -1.28
NRXN1-209ENST00000405581 KRTAP10-5P60370 271 aa7.04□□□□□ -1.28
NRXN1-209ENST00000405581 VPS13DQ5THJ4 4388 aa7.03□□□□□ -1.28
NRXN1-209ENST00000405581 DNAH17Q9UFH2 4485 aa7.01□□□□□ -1.29
NRXN1-209ENST00000405581 CSMD3Q7Z407 3707 aa6.99□□□□□ -1.29
NRXN1-209ENST00000405581 KRTAP4-1Q9BYQ7 146 aa6.97□□□□□ -1.29
NRXN1-209ENST00000405581 DNAH2Q9P225 4427 aa6.96□□□□□ -1.3
NRXN1-209ENST00000405581 DYNC1H1Q14204 4646 aaKnown RBP6.95□□□□□ -1.3
NRXN1-209ENST00000405581 MT1HP80294 61 aa6.92□□□□□ -1.3
NRXN1-209ENST00000405581 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
NRXN1-209ENST00000405581 MT2AP02795 61 aa6.87□□□□□ -1.31
NRXN1-209ENST00000405581 LRP1BQ9NZR2 4599 aa6.86□□□□□ -1.31
NRXN1-209ENST00000405581 FAT1Q14517 4588 aa6.79□□□□□ -1.32
NRXN1-209ENST00000405581 STARD9Q9P2P6 4700 aa6.79□□□□□ -1.32
NRXN1-209ENST00000405581 RYR1P21817 5038 aa6.77□□□□□ -1.32
NRXN1-209ENST00000405581 DYNC2H1Q8NCM8 4307 aaKnown RBP6.76□□□□□ -1.33
NRXN1-209ENST00000405581 KRTAP19-4Q3LI73 84 aa6.76□□□□□ -1.33
NRXN1-209ENST00000405581 FAT2Q9NYQ8 4349 aa6.74□□□□□ -1.33
NRXN1-209ENST00000405581 SACSQ9NZJ4 4579 aa6.74□□□□□ -1.33
NRXN1-209ENST00000405581 KRTAP10-7P60409 375 aaPredicted RBP6.72□□□□□ -1.33
NRXN1-209ENST00000405581 DNAH3Q8TD57 4116 aa6.69□□□□□ -1.34
NRXN1-209ENST00000405581 MT1FP04733 61 aa6.66□□□□□ -1.34
NRXN1-209ENST00000405581 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
NRXN1-209ENST00000405581 DNAH8Q96JB1 4490 aa6.62□□□□□ -1.35
NRXN1-209ENST00000405581 PRKDCP78527 4128 aaKnown RBP6.62□□□□□ -1.35
NRXN1-209ENST00000405581 KRTAP19-5Q3LI72 72 aa6.59□□□□□ -1.35
NRXN1-209ENST00000405581 ANK2Q01484 3957 aa6.58□□□□□ -1.36
NRXN1-209ENST00000405581 APOBP04114 4563 aaKnown RBP6.54□□□□□ -1.36
NRXN1-209ENST00000405581 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
NRXN1-209ENST00000405581 RYR3Q15413 4870 aa6.48□□□□□ -1.37
NRXN1-209ENST00000405581 KIAA1109Q2LD37 5005 aa6.45□□□□□ -1.38
NRXN1-209ENST00000405581 KMT2AQ03164 3969 aa6.42□□□□□ -1.38
NRXN1-209ENST00000405581 KRTAP17-1Q9BYP8 105 aa6.41□□□□□ -1.38
NRXN1-209ENST00000405581 DNAH6Q9C0G6 4158 aa6.41□□□□□ -1.38
NRXN1-209ENST00000405581 VPS13BQ7Z7G8 4022 aa6.4□□□□□ -1.38
NRXN1-209ENST00000405581 KRTAP19-8Q3LI54 63 aa6.39□□□□□ -1.39
NRXN1-209ENST00000405581 RYR2Q92736 4967 aa6.37□□□□□ -1.39
NRXN1-209ENST00000405581 FAT3Q8TDW7 4589 aa6.32□□□□□ -1.4
NRXN1-209ENST00000405581 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
NRXN1-209ENST00000405581 LYSTQ99698 3801 aa6.29□□□□□ -1.4
NRXN1-209ENST00000405581 MYCBP2O75592 4640 aa6.28□□□□□ -1.4
NRXN1-209ENST00000405581 DNAH7Q8WXX0 4024 aa6.25□□□□□ -1.41
NRXN1-209ENST00000405581 SPRR2EP22531 72 aa6.25□□□□□ -1.41
NRXN1-209ENST00000405581 SPRR2BP35325 72 aa6.25□□□□□ -1.41
NRXN1-209ENST00000405581 SPRR2AP35326 72 aa6.25□□□□□ -1.41
NRXN1-209ENST00000405581 LRP1Q07954 4544 aaKnown RBP6.19□□□□□ -1.42
NRXN1-209ENST00000405581 CMYA5Q8N3K9 4069 aa6.18□□□□□ -1.42
NRXN1-209ENST00000405581 HERC2O95714 4834 aa6.12□□□□□ -1.43
NRXN1-209ENST00000405581 MT1XP80297 61 aa6.11□□□□□ -1.43
NRXN1-209ENST00000405581 HERC1Q15751 4861 aa6.11□□□□□ -1.43
NRXN1-209ENST00000405581 BIRC6Q9NR09 4857 aa6.1□□□□□ -1.43
NRXN1-209ENST00000405581 KRTAP9-8Q9BYQ0 159 aa6.09□□□□□ -1.43
NRXN1-209ENST00000405581 HECTD4Q9Y4D8 3996 aa6.08□□□□□ -1.44
NRXN1-209ENST00000405581 MT1BP07438 61 aa6.07□□□□□ -1.44
NRXN1-209ENST00000405581 KRTAP12-4P60329 112 aa6.07□□□□□ -1.44
NRXN1-209ENST00000405581 SPRR2DP22532 72 aa6.07□□□□□ -1.44
NRXN1-209ENST00000405581 LCE2BO14633 110 aa6.06□□□□□ -1.44
NRXN1-209ENST00000405581 MT1GP13640 62 aa6.05□□□□□ -1.44
NRXN1-209ENST00000405581 LCE3BQ5TA77 95 aa6.04□□□□□ -1.44
NRXN1-209ENST00000405581 LCE2CQ5TA81 110 aa6.04□□□□□ -1.44
NRXN1-209ENST00000405581 HSPG2P98160 4391 aa6.04□□□□□ -1.44
NRXN1-209ENST00000405581 FRAS1Q86XX4 4008 aa6.01□□□□□ -1.45
NRXN1-209ENST00000405581 PKD1P98161 4303 aa5.99□□□□□ -1.45
NRXN1-209ENST00000405581 KRTAP9-3Q9BYQ3 159 aa5.96□□□□□ -1.46
NRXN1-209ENST00000405581 PCLOQ9Y6V0 5065 aa5.93□□□□□ -1.46
NRXN1-209ENST00000405581 HYDINQ4G0P3 5121 aa5.92□□□□□ -1.46
NRXN1-209ENST00000405581 LRP2P98164 4655 aa5.91□□□□□ -1.46
NRXN1-209ENST00000405581 PKHD1L1Q86WI1 4243 aa5.86□□□□□ -1.47
NRXN1-209ENST00000405581 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
NRXN1-209ENST00000405581 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
NRXN1-209ENST00000405581 LCE3DQ9BYE3 92 aa5.82□□□□□ -1.48
NRXN1-209ENST00000405581 KRTAP4-8Q9BYQ9 185 aa5.82□□□□□ -1.48
NRXN1-209ENST00000405581 KRTAP19-2Q3LHN2 52 aa5.78□□□□□ -1.48
NRXN1-209ENST00000405581 PKHD1P08F94 4074 aa5.77□□□□□ -1.49
NRXN1-209ENST00000405581 LCE3EQ5T5B0 92 aa5.76□□□□□ -1.49
NRXN1-209ENST00000405581 KRTAP19-3Q7Z4W3 81 aa5.75□□□□□ -1.49
NRXN1-209ENST00000405581 MT1LQ93083 61 aa5.68□□□□□ -1.5
NRXN1-209ENST00000405581 LPAP08519 4548 aa5.63□□□□□ -1.51
NRXN1-209ENST00000405581 KMT2CQ8NEZ4 4911 aaKnown RBP5.61□□□□□ -1.51
NRXN1-209ENST00000405581 MUC17Q685J3 4493 aa5.6□□□□□ -1.51
NRXN1-209ENST00000405581 MT1EP04732 61 aa5.58□□□□□ -1.52
NRXN1-209ENST00000405581 LCE2DQ5TA82 110 aaPredicted RBP5.58□□□□□ -1.52
NRXN1-209ENST00000405581 TNXBP22105 4242 aa5.57□□□□□ -1.52
NRXN1-209ENST00000405581 EPPK1P58107 5090 aaKnown RBP5.55□□□□□ -1.52
NRXN1-209ENST00000405581 FLGP20930 4061 aaPredicted RBP5.54□□□□□ -1.52
NRXN1-209ENST00000405581 ABCA13Q86UQ4 5058 aa5.53□□□□□ -1.52
NRXN1-209ENST00000405581 MT3P25713 68 aa5.49□□□□□ -1.53
NRXN1-209ENST00000405581 KRTAP19-6Q3LI70 58 aa5.45□□□□□ -1.54
NRXN1-209ENST00000405581 MT1MQ8N339 61 aa5.43□□□□□ -1.54
NRXN1-209ENST00000405581 SYNE1Q8NF91 8797 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms